Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 7.3e-59 230.3 115 100.0
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 1.8e-20 102.8 72 73.6
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 3.7e-18 95.1 69 69.6
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 4.1e-17 91.7 54 79.6
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 7.7e-16 87.4 51 82.4
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 7.7e-16 87.4 69 65.2
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 7.7e-16 87.4 51 82.4
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 1.0e-15 87.0 69 62.3
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 1.3e-15 86.7 67 65.7
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 1.3e-15 86.7 65 69.2
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 2.2e-15 85.9 67 64.2
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 2.2e-15 85.9 104 49.0
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 2.9e-15 85.5 67 65.7
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 2.9e-15 85.5 69 62.3
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 3.8e-15 85.1 69 62.3
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 3.8e-15 85.1 51 78.4
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 3.8e-15 85.1 69 62.3
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 5.0e-15 84.7 67 62.7
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 6.5e-15 84.3 69 60.9
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 8.5e-15 84.0 58 69.0
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 8.5e-15 84.0 51 76.5
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 8.5e-15 84.0 67 64.2
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 8.5e-15 84.0 67 64.2
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 8.5e-15 84.0 51 76.5
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 8.5e-15 84.0 51 76.5
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 8.5e-15 84.0 51 76.5
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 8.5e-15 84.0 51 76.5
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 1.1e-14 83.6 104 48.1
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 1.1e-14 83.6 70 64.3
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.1e-14 83.6 69 60.9
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 1.4e-14 83.2 69 60.9
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 1.4e-14 83.2 51 78.4
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 1.9e-14 82.8 51 76.5
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 2.5e-14 82.4 51 76.5
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 3.2e-14 82.0 51 74.5
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 3.2e-14 82.0 51 76.5
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 3.2e-14 82.0 51 72.5
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 3.2e-14 82.0 51 74.5
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 4.2e-14 81.6 69 59.4
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 4.2e-14 81.6 51 72.5
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 4.2e-14 81.6 104 45.2
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 5.5e-14 81.3 61 63.9
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 7.2e-14 80.9 70 61.4
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 7.2e-14 80.9 52 76.9
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 7.2e-14 80.9 51 72.5
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 9.4e-14 80.5 49 77.6
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 9.4e-14 80.5 67 61.2
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 1.2e-13 80.1 51 74.5
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 1.6e-13 79.7 69 58.0
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 1.6e-13 79.7 69 59.4
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.6e-13 79.7 69 59.4
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 1.6e-13 79.7 51 74.5
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 2.1e-13 79.3 68 64.7
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 2.1e-13 79.3 69 56.5
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 2.1e-13 79.3 51 72.5
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 2.7e-13 79.0 98 46.9
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 3.6e-13 78.6 51 70.6
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 4.6e-13 78.2 47 74.5
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 4.6e-13 78.2 52 76.9
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 4.6e-13 78.2 52 76.9
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 4.6e-13 78.2 51 68.6
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 6.1e-13 77.8 51 70.6
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 6.1e-13 77.8 51 66.7
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 1.0e-12 77.0 51 70.6
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.4e-12 76.6 62 62.9
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 6.7e-12 74.3 51 70.6
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 8.8e-12 73.9 59 66.1
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 3.3e-11 72.0 64 53.1
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 4.3e-11 71.6 56 62.5
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 9.7e-11 70.5 49 69.4
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 2.2e-10 69.3 61 59.0
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 2.2e-10 69.3 113 40.7
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 2.8e-10 68.9 50 66.0
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 4.8e-10 68.2 60 56.7
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 1.4e-09 66.6 53 66.0
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.8e-09 66.2 68 48.5
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 1.8e-09 66.2 53 64.2
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 5.3e-09 64.7 70 47.1
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 7.7e-08 60.8 57 52.6
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 7.7e-08 60.8 60 56.7
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 1.3e-07 60.1 60 55.0
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 1.7e-07 59.7 53 56.6
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 2.9e-07 58.9 63 46.0
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 3.8e-07 58.5 61 55.7
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 5.5e-06 54.7 60 51.7
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 7.2e-06 54.3 60 55.0


User provided reference genes

Program Settings