Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G103600 Populus trichocarpa HOM05D007925 ORTHO05D009727 2.4e-125 452.2 237 100.0
Potri.012G102300 Populus trichocarpa HOM05D007925 ORTHO05D009727 1.7e-57 226.9 238 58.4
Potri.010G147301 Populus trichocarpa HOM05D007925 ORTHO05D009727 6.1e-44 181.8 169 65.7
Sabra12G0074900 Salix brachista HOM05D007925 ORTHO05D009727 2.3e-38 163.3 177 53.7
Manes.15G001100 Manihot esculenta HOM05D007925 ORTHO05D009727 8.3e-33 144.8 240 43.8
Dinv44272 Davidia involucrata HOM05D007925 ORTHO05D009727 4.3e-29 132.5 237 42.6
Ciclev10005876m.g Citrus clementina HOM05D007925 ORTHO05D009727 3.2e-24 116.3 241 38.2
Atru.chr4.3043 Acer truncatum HOM05D007925 ORTHO05D009727 4.6e-23 112.5 242 40.5
CiPaw.02G073300 Carya illinoinensis HOM05D007925 ORTHO05D009727 3.0e-22 109.8 240 37.1
QL12p029416 Quercus lobata HOM05D007925 ORTHO05D009727 3.3e-21 106.3 230 35.7
Actinidia18460 Actinidia chinensis HOM05D007925 ORTHO05D009727 7.3e-21 105.1 236 37.7
Thecc.04G303500 Theobroma cacao HOM05D007925 ORTHO05D009727 1.6e-20 104.0 247 38.1
RcHm_v2.0_Chr4g0425771 Rosa chinensis HOM05D007925 ORTHO05D009727 6.2e-20 102.1 241 34.9
Ah.13g071370 Amaranthus hybridus HOM05D007925 ORTHO05D009727 1.4e-19 100.9 228 35.1
TAR633G0906 Trochodendron aralioides HOM05D007925 ORTHO05D009727 8.9e-19 98.2 213 37.6
Cfa015292 Carpinus fangiana HOM05D007925 ORTHO05D009727 3.4e-18 96.3 206 40.8
TWI09G1395 Tripterygium wilfordii HOM05D007925 ORTHO05D009727 1.3e-17 94.4 238 37.4
Nitab4.5_0007718g0010 Nicotiana tabacum HOM05D007925 ORTHO05D009727 2.2e-17 93.6 242 37.2
Prupe.1G115200 Prunus persica HOM05D007925 ORTHO05D009727 2.9e-17 93.2 239 32.6
Rhsim04G0240400 Rhododendron simsii HOM05D007925 ORTHO05D009727 1.9e-16 90.5 242 36.0
Oeu063653.1 Olea europaea HOM05D007925 ORTHO05D009727 1.2e-15 87.8 247 37.2
Gohir.A02G055200 Gossypium hirsutum HOM05D007925 ORTHO05D009727 2.7e-15 86.7 243 35.8
CsaV3_6G028540 Cucumis sativus L. HOM05D007925 ORTHO05D009727 3.5e-15 86.3 240 30.8
FvH4_4g20350 Fragaria vesca HOM05D007925 ORTHO05D009727 4.6e-15 85.9 242 30.2
Gohir.D02G060200 Gossypium hirsutum HOM05D007925 ORTHO05D009727 1.0e-14 84.7 243 35.0
AUR62039262 Chenopodium quinoa HOM05D007925 ORTHO05D009727 1.7e-14 84.0 230 33.5
Nitab4.5_0009429g0010 Nicotiana tabacum HOM05D007925 ORTHO05D009727 1.7e-14 84.0 241 35.3
ClCG06G004510 Citrullus lanatus HOM05D007925 ORTHO05D009727 3.0e-14 83.2 241 31.5
Gorai.005G067800 Gossypium raimondii HOM05D007925 ORTHO05D009727 6.6e-14 82.0 243 35.0
Haze_01320 Corylus avellana HOM05D007925 ORTHO05D009727 1.1e-13 81.3 200 36.0
FAN07G0172 Fragaria x ananassa HOM05D007925 ORTHO05D009727 1.1e-13 81.3 147 34.7
Haze_01318 Corylus avellana HOM05D007925 ORTHO05D009727 1.5e-13 80.9 240 33.3
TWI53G0957 Tripterygium wilfordii HOM05D007925 ORTHO05D009727 1.5e-13 80.9 238 32.8
Glyma.09G034600 Glycine max HOM05D007925 ORTHO05D009727 2.5e-13 80.1 241 34.9
MELO3C021261.2 Cucumis melo HOM05D007925 ORTHO05D009727 3.3e-13 79.7 232 31.9
Nn4g25550 Nelumbo nucifera HOM05D007925 ORTHO05D009727 3.3e-13 79.7 261 31.4
FvH4_4g20280 Fragaria vesca HOM05D007925 ORTHO05D009727 4.3e-13 79.3 241 30.3
FAN12G1072 Fragaria x ananassa HOM05D007925 ORTHO05D009727 4.0e-11 72.8 165 34.5
Solyc03g093980.2 Solanum lycopersicum HOM05D007925 ORTHO05D009727 4.0e-11 72.8 227 33.9
Sopen03g024830 Solanum pennellii HOM05D007925 ORTHO05D009727 5.3e-11 72.4 225 34.7
MD16G1151500 Malus domestica HOM05D007925 ORTHO05D009727 6.9e-11 72.0 150 35.3
Glyma.15G139300 Glycine max HOM05D007925 ORTHO05D009727 9.0e-11 71.6 239 32.6
Manes.03G206101 Manihot esculenta HOM05D007925 ORTHO05D009727 1.5e-10 70.9 241 32.0
Migut.B00760 Erythranthe guttata HOM05D007925 ORTHO05D009727 4.4e-10 69.3 244 32.0
Sed0014435 Sechium edule HOM05D007925 ORTHO05D009727 9.9e-10 68.2 240 30.0
PGSC0003DMG400008341 Solanum tuberosum HOM05D007925 ORTHO05D009727 9.9e-10 68.2 194 35.1
SHI00122 Sapria himalayana HOM05D007925 ORTHO05D009727 1.9e-08 63.9 94 47.9
MD13G1151000 Malus domestica HOM05D007925 ORTHO05D009727 3.2e-08 63.2 120 35.8
Peaxi162Scf00935g00005 Petunia axillaris HOM05D007925 ORTHO05D009727 3.2e-08 63.2 151 35.1
COL.COLO4_34592 Corchorus olitorius HOM05D007925 ORTHO05D009727 4.2e-08 62.8 211 32.7
AUR62016227 Chenopodium quinoa HOM05D007925 ORTHO05D009727 5.4e-08 62.4 197 34.5
Lalb_Chr07g0182031 Lupinus albus HOM05D007925 ORTHO05D009727 5.4e-08 62.4 227 30.4
Cpa.g.sc9.40 Carica papaya HOM05D007925 ORTHO05D009727 1.3e-06 57.8 219 31.5
Eucgr.H04059 Eucalyptus grandis HOM05D007925 ORTHO05D009727 1.3e-06 57.8 186 32.3
CANSAT35G1711 Cannabis sativa HOM05D007925 ORTHO05D009727 5.1e-06 55.8 232 31.0


User provided reference genes

Program Settings