Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 4.9e-58 227.6 118 100.0
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 2.2e-50 202.2 118 88.1
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 7.0e-49 197.2 116 86.2
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 1.6e-48 196.1 119 81.5
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 2.3e-47 192.2 121 81.8
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 5.0e-47 191.0 119 79.0
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 8.6e-47 190.3 121 79.3
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 2.5e-46 188.7 121 81.0
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 4.3e-46 188.0 121 79.3
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 7.3e-46 187.2 121 79.3
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 9.5e-46 186.8 121 76.9
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 1.6e-45 186.0 121 78.5
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.6e-45 186.0 121 78.5
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 2.1e-45 185.7 121 79.3
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 2.1e-45 185.7 121 76.9
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 2.1e-45 185.7 117 81.2
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 2.8e-45 185.3 117 79.5
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 2.8e-45 185.3 121 77.7
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 3.6e-45 184.9 112 83.9
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 3.6e-45 184.9 121 78.5
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 4.7e-45 184.5 117 81.2
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 1.1e-44 183.3 121 76.9
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.1e-44 183.3 121 77.7
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 1.1e-44 183.3 121 77.7
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 1.1e-44 183.3 112 83.0
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 2.3e-44 182.2 119 75.6
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 3.1e-44 181.8 118 77.1
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 3.1e-44 181.8 121 76.0
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 5.2e-44 181.0 118 78.8
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 6.8e-44 180.6 120 76.7
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 6.8e-44 180.6 121 72.7
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 8.9e-44 180.3 121 76.0
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.2e-43 179.9 121 72.7
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 1.5e-43 179.5 120 76.7
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 1.5e-43 179.5 118 77.1
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 2.0e-43 179.1 114 78.1
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 3.4e-43 178.3 121 76.9
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 3.4e-43 178.3 121 72.7
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 3.4e-43 178.3 112 81.2
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 4.4e-43 177.9 118 76.3
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 4.4e-43 177.9 112 80.4
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 4.4e-43 177.9 121 74.4
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 7.5e-43 177.2 112 75.9
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 9.8e-43 176.8 121 73.6
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 9.8e-43 176.8 121 73.6
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 9.8e-43 176.8 112 75.9
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 1.3e-42 176.4 121 74.4
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 2.9e-42 175.3 121 74.4
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 2.9e-42 175.3 121 71.9
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 2.9e-42 175.3 121 76.0
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 2.9e-42 175.3 121 74.4
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 4.9e-42 174.5 121 71.1
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 4.9e-42 174.5 114 77.2
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 8.3e-42 173.7 114 77.2
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.1e-41 173.3 121 76.0
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 1.1e-41 173.3 111 79.3
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 2.4e-41 172.2 112 77.7
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 5.4e-41 171.0 112 77.7
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 7.1e-41 170.6 112 77.7
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 9.2e-41 170.2 112 77.7
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 1.6e-40 169.5 121 70.2
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 2.1e-40 169.1 112 77.7
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 2.1e-40 169.1 112 76.8
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 2.1e-40 169.1 112 76.8
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 2.1e-40 169.1 112 76.8
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 2.1e-40 169.1 112 76.8
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 2.1e-40 169.1 121 71.1
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 2.7e-40 168.7 112 76.8
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 3.5e-40 168.3 111 73.0
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 4.6e-40 167.9 121 70.2
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 6.0e-40 167.5 112 75.9
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 7.8e-40 167.2 114 73.7
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 1.3e-39 166.4 112 75.9
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 1.7e-39 166.0 114 74.6
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.7e-39 166.0 112 74.1
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 1.7e-39 166.0 114 72.8
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 3.9e-39 164.9 113 73.5
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 6.6e-39 164.1 101 81.2
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 1.1e-38 163.3 114 71.1
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 1.1e-38 163.3 114 71.9
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 1.1e-38 163.3 113 67.3
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 1.5e-38 162.9 146 61.0
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 1.9e-38 162.5 113 74.3
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 3.3e-38 161.8 121 68.6
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 3.3e-38 161.8 114 71.1
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 4.3e-38 161.4 101 79.2
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 9.5e-38 160.2 121 72.7
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 6.2e-37 157.5 105 76.2
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 1.4e-36 156.4 104 76.9
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 1.8e-36 156.0 105 78.1
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 3.1e-36 155.2 103 72.8
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 8.9e-36 153.7 114 72.8
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 8.9e-36 153.7 106 69.8
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 1.2e-35 153.3 104 76.9
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 1.2e-35 153.3 107 72.0
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 1.5e-35 152.9 94 77.7
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 2.0e-35 152.5 104 75.0
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.0e-35 152.5 108 71.3
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 2.0e-35 152.5 103 71.8
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 3.4e-35 151.8 104 74.0
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 3.4e-35 151.8 106 66.0
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 4.4e-35 151.4 103 74.8
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 4.4e-35 151.4 100 76.0
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 5.8e-35 151.0 104 74.0
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 7.6e-35 150.6 104 73.1
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 1.7e-34 149.4 108 71.3
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 2.9e-34 148.7 89 83.1
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 4.9e-34 147.9 112 67.9
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 6.4e-34 147.5 103 72.8
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 8.4e-34 147.1 104 70.2
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 2.4e-33 145.6 89 78.7
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 3.2e-33 145.2 110 70.0
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 5.4e-33 144.4 101 71.3
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 7.1e-33 144.1 99 71.7
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 2.7e-32 142.1 91 74.7
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 1.0e-31 140.2 105 71.4
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.0e-31 140.2 103 69.9
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 2.3e-31 139.0 104 64.4
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 3.0e-31 138.7 111 59.5
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.1e-30 136.7 98 67.3
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 1.9e-30 136.0 126 60.3
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 6.2e-29 131.0 95 71.6
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 8.1e-29 130.6 109 60.6
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 1.8e-28 129.4 101 68.3
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 8.9e-28 127.1 101 60.4
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.4e-25 119.8 93 64.5
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.2e-24 116.7 75 78.7
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 1.7e-23 112.8 111 50.5
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 3.9e-23 111.7 111 61.3
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 5.6e-22 107.8 109 53.2
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.3e-21 106.7 70 74.3
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 7.6e-19 97.4 62 80.6
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.3e-18 96.7 79 59.5
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 5.1e-15 84.7 66 63.6
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 3.3e-14 82.0 109 43.1
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 2.1e-13 79.3 85 52.9
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.7e-10 69.7 52 59.6
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 4.2e-09 65.1 94 36.2
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 6.0e-08 61.2 95 38.9


User provided reference genes

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