Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 9.4e-119 430.3 225 100.0
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 3.6e-70 268.9 293 58.7
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 6.8e-69 264.6 292 58.6
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 7.3e-63 244.6 289 55.0
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 6.4e-59 231.5 261 58.6
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 1.9e-58 229.9 262 58.0
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 1.6e-57 226.9 263 57.0
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 1.6e-57 226.9 189 66.7
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 2.7e-57 226.1 262 56.9
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 6.0e-57 224.9 233 57.9
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.0e-56 224.2 280 51.8
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 1.3e-56 223.8 247 58.3
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 3.0e-56 222.6 282 53.9
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 3.9e-56 222.2 189 66.1
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 8.7e-56 221.1 287 52.3
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 8.7e-56 221.1 285 51.6
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 8.7e-56 221.1 287 52.3
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 2.5e-55 219.5 190 65.3
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 3.3e-55 219.2 310 50.3
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 3.3e-55 219.2 267 52.8
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 4.3e-55 218.8 189 64.0
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 4.3e-55 218.8 189 64.0
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 4.3e-55 218.8 189 65.6
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 7.4e-55 218.0 277 53.1
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 9.6e-55 217.6 187 66.3
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 1.6e-54 216.9 276 52.2
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 2.1e-54 216.5 276 50.7
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 2.8e-54 216.1 303 49.5
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 3.6e-54 215.7 189 64.0
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 4.8e-54 215.3 190 63.7
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 8.1e-54 214.5 179 69.3
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 8.1e-54 214.5 275 52.4
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 2.4e-53 213.0 221 58.4
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 4.0e-53 212.2 288 49.7
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.5e-52 210.3 278 50.4
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 2.6e-52 209.5 187 64.7
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 3.4e-52 209.1 182 64.8
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 3.4e-52 209.1 216 57.4
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 4.5e-52 208.8 268 52.2
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 5.8e-52 208.4 189 63.0
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 7.6e-52 208.0 183 66.1
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 1.3e-51 207.2 268 51.5
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.7e-51 206.8 189 63.0
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 2.2e-51 206.5 286 50.3
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.9e-51 206.1 190 61.6
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 2.9e-51 206.1 285 49.5
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 2.9e-51 206.1 182 63.7
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 4.9e-51 205.3 189 62.4
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 6.4e-51 204.9 260 51.5
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 6.4e-51 204.9 189 62.4
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 8.4e-51 204.5 261 51.0
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.1e-50 204.1 187 63.6
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.9e-50 203.4 249 52.6
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 1.9e-50 203.4 277 51.6
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 7.1e-50 201.4 271 50.9
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 7.1e-50 201.4 274 50.4
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 9.3e-50 201.1 189 61.9
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 2.7e-49 199.5 187 62.6
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 4.6e-49 198.7 272 48.5
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 7.9e-49 198.0 278 50.7
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 1.0e-48 197.6 190 61.1
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 1.8e-48 196.8 287 48.1
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 8.7e-48 194.5 190 60.0
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 1.5e-47 193.7 189 57.1
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.5e-47 193.7 209 55.5
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 1.5e-47 193.7 183 61.2
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 3.3e-47 192.6 270 47.8
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 3.3e-47 192.6 313 45.4
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 5.6e-47 191.8 184 60.9
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 5.6e-47 191.8 363 40.5
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 2.1e-46 189.9 184 59.8
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 1.4e-45 187.2 256 48.8
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 3.1e-45 186.0 187 59.9
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 7.6e-44 181.4 188 57.4
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 1.3e-43 180.6 282 45.7
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 1.3e-43 180.6 162 64.2
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 1.3e-43 180.6 183 58.5
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 8.4e-43 177.9 182 55.5
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 1.4e-42 177.2 275 46.9
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 7.1e-42 174.9 186 57.5
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 1.6e-41 173.7 186 55.9
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 2.1e-41 173.3 186 55.9
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 3.5e-41 172.6 253 47.0
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 6.0e-41 171.8 186 55.4
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 5.1e-40 168.7 244 48.0
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 3.3e-39 166.0 246 45.9
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.6e-38 163.7 256 46.1
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 1.1e-37 161.0 202 51.0
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 3.1e-37 159.5 219 48.9
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 3.1e-37 159.5 156 59.0
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 6.9e-37 158.3 322 39.8
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 1.2e-36 157.5 182 52.7
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 3.4e-36 156.0 182 51.6
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 3.8e-35 152.5 194 51.5
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 1.4e-34 150.6 197 50.3
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 9.3e-34 147.9 309 40.1
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 4.3e-31 139.0 153 54.9
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 9.7e-31 137.9 187 47.6
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 2.8e-30 136.3 109 67.9
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 3.8e-27 125.9 134 58.2
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 2.5e-26 123.2 81 76.5
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 9.4e-26 121.3 226 41.2
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 1.0e-24 117.9 132 55.3
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 3.0e-24 116.3 182 47.3
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 3.3e-23 112.8 199 40.2
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 5.9e-20 102.1 119 50.4
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 2.1e-17 93.6 235 34.0
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 7.4e-15 85.1 71 62.0
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 3.8e-11 72.8 46 73.9
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 5.0e-11 72.4 63 60.3
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 9.4e-10 68.2 46 73.9
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 4.7e-09 65.9 42 76.2
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 1.8e-08 63.9 118 39.0
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 3.7e-06 56.2 224 30.4


User provided reference genes

Program Settings