Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 3.3e-169 598.2 284 100.0
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 1.8e-146 522.7 341 76.2
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 1.2e-113 413.7 284 68.0
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.1e-111 407.1 277 69.0
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 7.0e-111 404.4 270 70.0
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 7.7e-110 401.0 279 68.1
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 2.2e-109 399.4 285 64.9
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 3.2e-108 395.6 276 69.2
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 7.2e-108 394.4 276 65.9
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 2.7e-107 392.5 285 66.7
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 3.6e-107 392.1 286 64.0
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 4.7e-107 391.7 276 66.7
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 1.0e-106 390.6 275 66.2
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 2.0e-105 386.3 269 63.2
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 9.8e-105 384.0 270 65.9
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 6.3e-104 381.3 255 67.5
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 6.3e-104 381.3 281 61.2
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 8.3e-104 380.9 274 64.6
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 1.8e-103 379.8 281 60.9
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 2.4e-103 379.4 292 62.3
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 3.1e-103 379.0 286 63.6
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 4.1e-103 378.6 272 64.0
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 4.1e-103 378.6 292 62.3
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 2.0e-102 376.3 272 65.8
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 5.9e-102 374.8 256 64.8
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.0e-101 374.0 272 61.8
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 1.3e-101 373.6 269 63.6
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.7e-101 373.2 285 64.6
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 4.3e-100 368.6 282 63.8
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 2.1e-99 366.3 284 59.2
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 2.1e-99 366.3 252 65.1
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 2.1e-99 366.3 280 61.1
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 2.8e-99 365.9 281 60.5
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 4.7e-99 365.2 252 63.9
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 6.1e-99 364.8 275 59.6
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.4e-98 363.6 282 62.8
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 1.5e-97 360.1 276 58.0
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 2.0e-97 359.8 287 61.3
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 2.6e-97 359.4 277 61.7
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 7.5e-97 357.8 259 61.4
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 9.8e-97 357.5 269 62.8
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 1.3e-96 357.1 271 58.7
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 1.3e-96 357.1 271 59.0
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.7e-96 356.7 268 61.9
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 1.7e-96 356.7 299 59.2
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 1.1e-95 354.0 271 60.9
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.1e-95 354.0 282 57.4
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 2.4e-95 352.8 284 57.0
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 3.2e-95 352.4 256 62.1
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 3.2e-95 352.4 268 60.4
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 4.1e-95 352.1 245 66.9
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 1.2e-94 350.5 256 61.7
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 1.2e-94 350.5 256 61.7
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 2.0e-94 349.7 255 61.6
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 4.6e-94 348.6 276 58.7
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 1.0e-93 347.4 276 59.4
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 3.0e-93 345.9 256 59.8
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 3.9e-93 345.5 284 59.9
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 6.6e-93 344.7 291 58.1
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 8.6e-93 344.4 271 58.3
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 1.2e-91 340.5 275 57.1
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 2.1e-91 339.7 272 58.1
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 2.8e-91 339.3 328 51.5
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 1.8e-90 336.7 257 59.9
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 1.2e-89 334.0 273 59.0
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 2.6e-89 332.8 263 58.9
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.4e-89 332.4 275 60.4
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 5.8e-89 331.6 251 59.4
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 9.8e-89 330.9 332 49.1
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 1.3e-88 330.5 207 75.4
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 1.7e-88 330.1 255 58.4
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.4e-87 327.0 282 59.6
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 1.9e-87 326.6 247 57.5
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 1.2e-86 323.9 306 51.0
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 7.8e-86 321.2 227 65.6
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 1.3e-85 320.5 364 45.1
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 2.3e-85 319.7 269 55.4
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 3.0e-85 319.3 252 56.0
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 3.9e-85 318.9 256 58.2
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 3.6e-83 312.4 247 58.3
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 5.8e-81 305.1 237 57.4
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 1.3e-80 303.9 276 54.3
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 4.9e-80 302.0 242 56.6
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 2.4e-79 299.7 200 67.5
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 4.1e-79 298.9 200 67.0
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 1.2e-78 297.4 193 71.5
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.1e-76 290.8 207 65.7
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 1.1e-76 290.8 202 66.8
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 1.5e-76 290.4 207 64.7
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 1.2e-75 287.3 283 52.3
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 3.6e-75 285.8 210 61.4
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 1.1e-74 284.3 246 53.3
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 1.3e-72 277.3 234 54.3
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 8.4e-72 274.6 210 58.6
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 1.1e-71 274.2 202 61.4
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 2.4e-71 273.1 319 47.3
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 5.4e-71 271.9 202 62.4
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 1.0e-69 267.7 204 60.3
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 5.1e-69 265.4 284 47.2
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 1.3e-64 250.8 186 64.0
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 9.0e-58 228.0 183 57.9
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 5.8e-57 225.3 182 56.0
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 4.2e-55 219.2 357 36.1
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 7.9e-54 214.9 266 42.1
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 2.5e-52 209.9 207 51.7
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 1.3e-51 207.6 224 46.0
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.2e-49 201.1 236 43.2
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 2.4e-47 193.4 261 38.7
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 9.3e-47 191.4 136 66.9
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 6.0e-46 188.7 174 54.0
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 2.6e-33 146.7 169 40.8
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.9e-31 140.6 129 55.8
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 3.6e-30 136.3 155 51.6
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 3.9e-29 132.9 165 41.2
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 5.7e-28 129.0 180 39.4
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 1.0e-24 118.2 93 67.7
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 3.8e-24 116.3 242 32.6
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 1.4e-13 81.3 71 46.5
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 8.8e-13 78.6 56 71.4
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 9.4e-07 58.5 73 41.1
HanXRQChr08g0221941 Helianthus annuus HOM05D006653 ORTHO05D008346 1.6e-06 57.8 66 48.5
Lsat_1_v5_gn_5_133280 Lactuca sativa HOM05D005717 ORTHO05D007221 6.1e-06 55.8 76 43.4


User provided reference genes

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