Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 2.7e-121 438.7 231 100.0
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 4.7e-105 384.8 231 86.6
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 9.1e-93 344.0 197 91.9
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 6.4e-70 268.1 250 62.4
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 3.0e-67 259.2 163 83.4
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 5.2e-64 248.4 257 57.2
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.5e-63 246.9 256 57.4
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 3.4e-63 245.7 257 56.4
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.3e-62 243.8 257 56.0
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 2.7e-60 236.1 243 57.2
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 6.0e-60 235.0 251 56.2
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 7.8e-60 234.6 252 57.5
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 1.3e-59 233.8 252 56.0
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 7.3e-58 228.0 252 56.7
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 1.1e-56 224.2 254 54.7
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 4.4e-55 218.8 248 52.0
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 7.5e-55 218.0 251 53.0
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 9.9e-55 217.6 258 52.7
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 3.2e-53 212.6 257 50.2
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 1.6e-52 210.3 256 54.7
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 1.6e-52 210.3 241 50.6
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 7.8e-52 208.0 257 53.3
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 7.8e-52 208.0 247 51.0
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 1.0e-51 207.6 254 52.0
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 1.0e-51 207.6 256 53.5
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 1.0e-51 207.6 248 50.4
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 1.3e-51 207.2 238 53.4
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 1.7e-51 206.8 212 57.1
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 3.0e-51 206.1 237 53.2
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 3.0e-51 206.1 247 50.6
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 5.1e-51 205.3 246 52.4
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 3.3e-50 202.6 252 52.8
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 4.3e-50 202.2 240 52.1
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 5.6e-50 201.8 247 51.4
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 9.5e-50 201.1 250 51.6
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.2e-49 200.7 252 50.0
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 2.1e-49 199.9 202 57.4
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 3.6e-49 199.1 255 52.9
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 4.0e-48 195.7 252 49.6
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 5.2e-48 195.3 259 49.0
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 8.9e-48 194.5 244 50.4
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 8.9e-48 194.5 253 51.8
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.5e-47 193.7 259 48.6
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.5e-47 193.7 259 48.6
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 2.0e-47 193.4 256 50.4
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.6e-47 193.0 250 49.6
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 7.6e-47 191.4 243 49.0
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 1.7e-46 190.3 190 56.8
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 3.8e-46 189.1 242 50.8
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 3.8e-46 189.1 260 48.5
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 6.4e-46 188.3 204 54.4
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 1.1e-45 187.6 256 45.7
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 4.2e-45 185.7 264 46.2
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 5.4e-45 185.3 224 50.4
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 7.1e-45 184.9 204 53.9
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 9.2e-45 184.5 200 56.0
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 1.2e-44 184.1 232 50.4
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 4.6e-44 182.2 214 54.2
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 4.6e-44 182.2 245 49.4
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 4.6e-44 182.2 255 47.1
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 4.6e-44 182.2 242 46.7
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 6.0e-44 181.8 254 49.6
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 1.0e-43 181.0 254 49.2
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 3.0e-43 179.5 243 47.3
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 6.6e-43 178.3 221 50.7
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 6.6e-43 178.3 245 48.2
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 1.1e-42 177.6 236 49.2
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.5e-42 177.2 242 49.6
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 2.5e-42 176.4 242 46.3
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 5.6e-42 175.3 243 47.3
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 8.1e-41 171.4 238 48.7
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 1.2e-39 167.5 242 43.4
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 2.0e-39 166.8 242 49.6
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 3.4e-39 166.0 213 50.2
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 3.4e-39 166.0 231 46.8
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 9.9e-39 164.5 239 45.6
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 4.9e-38 162.2 239 44.8
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 1.9e-37 160.2 141 62.4
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 7.1e-37 158.3 251 45.0
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 1.2e-36 157.5 243 40.3
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 3.5e-36 156.0 105 72.4
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 3.5e-36 156.0 105 72.4
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 1.0e-35 154.5 234 44.0
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 1.0e-35 154.5 232 45.7
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 3.0e-35 152.9 192 50.0
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 8.7e-35 151.4 237 43.9
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 7.3e-34 148.3 167 53.3
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 9.6e-34 147.9 127 65.4
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 1.4e-32 144.1 244 41.0
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 5.3e-32 142.1 128 57.8
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 5.3e-32 142.1 128 57.8
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 6.9e-32 141.7 128 57.8
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 6.9e-32 141.7 244 39.3
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 9.0e-32 141.4 126 57.9
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 1.5e-31 140.6 114 62.3
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 1.5e-31 140.6 114 62.3
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 1.5e-31 140.6 114 62.3
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 1.5e-31 140.6 114 62.3
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 9.9e-31 137.9 145 53.8
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 1.3e-30 137.5 155 51.6
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 1.7e-30 137.1 170 49.4
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 2.2e-30 136.7 166 49.4
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 6.4e-30 135.2 114 60.5
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 3.2e-29 132.9 136 56.6
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 1.7e-22 110.5 116 54.3
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 2.5e-21 106.7 171 40.4
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 4.2e-21 105.9 83 60.2
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 1.1e-18 97.8 162 42.6
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 7.4e-10 68.6 171 33.3
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 1.6e-09 67.4 128 36.7
Lsat_1_v5_gn_7_113640 Lactuca sativa HOM05D007823 ORTHO05D000174 2.2e-06 57.0 63 54.0
Pp3c10_22900 Physcomitrium patens HOM05D033432 ORTHO05D009084 2.2e-06 57.0 118 35.6


User provided reference genes

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