Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 7.4e-278 959.9 487 100.0
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 6.1e-240 833.9 487 88.5
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 7.9e-179 630.9 447 72.3
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 9.3e-172 607.4 441 71.0
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 1.1e-169 600.5 450 68.9
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 5.9e-166 588.2 453 67.5
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 7.4e-161 571.2 450 65.8
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.3e-160 570.5 444 66.2
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 1.4e-159 567.0 450 66.4
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 2.6e-158 562.8 453 65.3
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 5.9e-158 561.6 445 66.1
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 1.0e-157 560.8 451 64.3
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 2.2e-157 559.7 444 65.8
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 5.0e-157 558.5 444 65.8
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 1.4e-156 557.0 456 64.3
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 4.2e-156 555.4 448 63.6
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.1e-153 547.4 445 62.9
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 1.1e-153 547.4 443 65.5
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 2.6e-153 546.2 445 62.9
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 2.6e-153 546.2 449 64.1
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 6.3e-152 541.6 465 60.9
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 2.6e-150 536.2 445 62.0
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 4.5e-150 535.4 439 65.1
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 7.2e-148 528.1 448 62.1
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.2e-147 527.3 452 63.7
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 2.7e-147 526.2 452 62.4
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 4.7e-147 525.4 463 60.7
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 6.1e-147 525.0 452 63.5
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 7.9e-147 524.6 443 62.5
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 1.4e-146 523.9 443 64.3
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 8.8e-146 521.2 451 62.1
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 8.8e-146 521.2 461 60.7
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 2.6e-145 519.6 448 59.6
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 9.7e-145 517.7 448 60.0
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 1.3e-144 517.3 439 61.0
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 1.7e-144 516.9 438 60.7
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 3.7e-144 515.8 438 60.7
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 3.7e-144 515.8 438 61.0
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 1.1e-143 514.2 443 63.9
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 1.6e-142 510.4 449 59.5
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 2.6e-142 509.6 443 59.4
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 4.5e-142 508.8 442 59.7
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 1.7e-141 506.9 428 62.1
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 2.2e-141 506.5 443 60.9
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 1.1e-140 504.2 439 59.5
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 3.2e-140 502.7 433 60.7
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 5.5e-140 501.9 473 57.9
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 5.5e-140 501.9 466 56.9
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.6e-139 500.4 435 60.5
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 1.4e-138 497.3 437 58.4
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 3.0e-138 496.1 436 58.0
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 3.0e-138 496.1 448 59.6
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 5.2e-138 495.4 451 60.8
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 8.8e-138 494.6 443 60.9
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 4.4e-137 492.3 435 59.5
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 7.5e-137 491.5 437 59.0
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 4.8e-136 488.8 458 58.3
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 4.8e-136 488.8 439 58.1
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 6.3e-136 488.4 453 59.2
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 8.2e-136 488.0 437 60.0
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 1.1e-135 487.6 440 56.4
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 3.1e-135 486.1 458 57.4
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 5.3e-135 485.3 447 55.7
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 7.0e-135 485.0 439 57.2
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 2.7e-134 483.0 425 58.4
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 2.7e-134 483.0 506 53.4
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 3.5e-134 482.6 439 56.7
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 3.5e-134 482.6 304 76.0
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 1.0e-133 481.1 431 57.3
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 8.5e-133 478.0 440 56.6
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 1.9e-132 476.9 431 56.8
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 1.9e-132 476.9 431 57.1
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 2.5e-132 476.5 439 55.4
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 7.2e-132 474.9 447 55.9
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 8.0e-131 471.5 433 58.0
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 1.4e-130 470.7 466 54.9
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 2.3e-130 469.9 449 55.0
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 2.3e-130 469.9 439 55.6
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 1.2e-129 467.6 437 56.3
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 2.0e-129 466.8 444 57.0
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 2.6e-129 466.5 432 56.0
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 3.4e-129 466.1 421 58.9
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 2.2e-128 463.4 503 54.7
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 7.0e-127 458.4 461 58.4
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 3.5e-126 456.1 436 55.5
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 3.0e-122 443.0 382 59.2
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 5.2e-122 442.2 439 55.1
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 9.8e-121 438.0 387 58.9
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 4.5e-118 429.1 443 53.7
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 5.9e-118 428.7 450 54.7
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 7.8e-118 428.3 436 54.6
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 1.1e-116 424.5 298 68.1
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 9.5e-116 421.4 421 53.7
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 1.5e-108 397.5 429 50.6
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 3.3e-108 396.4 450 50.7
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 6.4e-104 382.1 438 47.3
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 3.6e-99 366.3 445 49.0
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 6.8e-98 362.1 341 60.4
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 7.1e-95 352.1 451 45.7
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 2.2e-88 330.5 457 41.4
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 1.9e-87 327.4 365 48.8
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 1.4e-63 248.1 328 45.7
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 3.0e-61 240.4 404 41.8
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 2.4e-58 230.7 165 65.5
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 4.5e-57 226.5 370 37.6
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 5.8e-57 226.1 358 38.8
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 1.3e-56 224.9 283 46.3
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 1.0e-53 215.3 281 41.6
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 1.0e-53 215.3 141 72.3
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.8e-53 214.5 152 67.1
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 2.4e-50 204.1 363 35.8
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 3.1e-50 203.8 318 38.1
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 5.0e-48 196.4 234 50.4
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 2.2e-43 181.0 141 57.4
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 2.9e-40 170.6 160 58.1
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 2.5e-39 167.5 141 61.0
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 2.2e-35 154.5 305 32.1
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 4.5e-33 146.7 159 47.2
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 3.7e-19 100.5 260 25.0
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 2.9e-16 90.9 61 65.6
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 3.8e-16 90.5 61 67.2
PRCOL_00002967 Prasinoderma coloniale HOM05D006228 ORTHO05D007847 2.0e-12 78.2 188 27.7
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 3.7e-11 73.9 113 40.7
Nitab4.5_0001379g0140 Nicotiana tabacum HOM05D006228 ORTHO05D007847 6.1e-06 56.6 29 79.3


User provided reference genes

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