Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G061600 Populus trichocarpa HOM05D006892 ORTHO05D008592 1.6e-58 229.2 110 100.0
Potri.010G196500 Populus trichocarpa HOM05D006892 ORTHO05D008592 1.9e-27 125.9 111 60.4
Sabra08G0045200 Salix brachista HOM05D006892 ORTHO05D008592 5.4e-27 124.4 110 59.1
Sabra10G0151100 Salix brachista HOM05D006892 ORTHO05D008592 3.0e-25 118.6 109 56.9
Manes.07G122400 Manihot esculenta HOM05D006892 ORTHO05D008592 1.2e-15 86.7 112 45.5
Manes.10G021300 Manihot esculenta HOM05D006892 ORTHO05D008592 3.4e-13 78.6 109 44.0
GSVIVG01016437001 Vitis vinifera HOM05D006892 ORTHO05D008592 1.1e-11 73.6 107 38.3
Haze_18710 Corylus avellana HOM05D006892 ORTHO05D008592 1.4e-11 73.2 94 43.6
Hma1.2p1_0039F.1_g024865 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 1.4e-11 73.2 96 41.7
Hma1.2p1_0039F.1_g024870 Hydrangea macrophylla HOM05D006892 ORTHO05D008592 1.4e-11 73.2 96 41.7
CiPaw.01G293100 Carya illinoinensis HOM05D006892 ORTHO05D008592 1.9e-11 72.8 40 70.0
MD12G1154700 Malus domestica HOM05D006892 ORTHO05D008592 1.9e-11 72.8 112 39.3
Haze_17150 Corylus avellana HOM05D006892 ORTHO05D008592 4.2e-11 71.6 41 70.7
Haze_20883 Corylus avellana HOM05D006892 ORTHO05D008592 7.1e-11 70.9 107 38.3
Haze_20892 Corylus avellana HOM05D006892 ORTHO05D008592 7.1e-11 70.9 107 38.3
MBI05_g02667_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 9.3e-11 70.5 40 67.5
Haze_17148 Corylus avellana HOM05D000015 ORTHO05D000270 1.2e-10 70.1 94 42.6
Dinv34454 Davidia involucrata HOM05D006892 ORTHO05D008592 1.2e-10 70.1 97 40.2
Dinv37115 Davidia involucrata HOM05D006892 ORTHO05D008592 2.1e-10 69.3 110 39.1
FAN05G3252 Fragaria x ananassa HOM05D006892 ORTHO05D008592 2.1e-10 69.3 98 38.8
Atru.chr12.266 Acer truncatum HOM05D006892 ORTHO05D008592 2.7e-10 68.9 46 73.9
Glyma.07G139200 Glycine max HOM05D006892 ORTHO05D008592 2.7e-10 68.9 100 38.0
Medtr7g065130 Medicago truncatula HOM05D006892 ORTHO05D008592 2.7e-10 68.9 108 35.2
Ciclev10033223m.g Citrus clementina HOM05D006892 ORTHO05D008592 3.5e-10 68.6 44 65.9
Cfa001402 Carpinus fangiana HOM05D006892 ORTHO05D008592 4.6e-10 68.2 41 65.9
COL.COLO4_14695 Corchorus olitorius HOM05D006892 ORTHO05D008592 4.6e-10 68.2 107 40.2
FAN14G5964 Fragaria x ananassa HOM05D006892 ORTHO05D008592 4.6e-10 68.2 98 37.8
Glyma.18G189800 Glycine max HOM05D006892 ORTHO05D008592 4.6e-10 68.2 100 37.0
FAN09G3730 Fragaria x ananassa HOM05D006892 ORTHO05D008592 6.0e-10 67.8 98 37.8
Glyma.04G105400 Glycine max HOM05D006892 ORTHO05D008592 6.0e-10 67.8 99 36.4
Lj1g0020029 Lotus japonicus HOM05D006892 ORTHO05D008592 1.3e-09 66.6 100 36.0
FAN02G3144 Fragaria x ananassa HOM05D006892 ORTHO05D008592 1.7e-09 66.2 98 36.7
Glyma.01G105400 Glycine max HOM05D006892 ORTHO05D008592 1.7e-09 66.2 39 64.1
FvH4_6g12730 Fragaria vesca HOM05D006892 ORTHO05D008592 2.3e-09 65.9 98 36.7
Prupe.6G264500 Prunus persica HOM05D006892 ORTHO05D008592 3.0e-09 65.5 112 36.6
Lalb_Chr03g0042701 Lupinus albus HOM05D006892 ORTHO05D008592 3.9e-09 65.1 99 37.4
Lalb_Chr19g0125031 Lupinus albus HOM05D006892 ORTHO05D008592 3.9e-09 65.1 100 36.0
Psat3g133520 Pisum sativum HOM05D006892 ORTHO05D008592 3.9e-09 65.1 100 38.0
RcHm_v2.0_Chr3g0464651 Rosa chinensis HOM05D006892 ORTHO05D008592 3.9e-09 65.1 98 35.7
TAR633G0729 Trochodendron aralioides HOM05D006892 ORTHO05D008592 3.9e-09 65.1 99 39.4
CSS0011916 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 6.6e-09 64.3 111 38.7
TAR623G0452 Trochodendron aralioides HOM05D006892 ORTHO05D008592 6.6e-09 64.3 38 63.2
TAR636G2473 Trochodendron aralioides HOM05D006892 ORTHO05D008592 6.6e-09 64.3 100 37.0
Gohir.A10G225300 Gossypium hirsutum HOM05D006892 ORTHO05D008592 8.7e-09 63.9 36 75.0
Gohir.D10G238364 Gossypium hirsutum HOM05D006892 ORTHO05D008592 8.7e-09 63.9 36 75.0
Gorai.011G273300 Gossypium raimondii HOM05D006892 ORTHO05D008592 8.7e-09 63.9 36 75.0
Phvul.001G238200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 8.7e-09 63.9 42 59.5
Phvul.010G009200 Phaseolus vulgaris HOM05D006892 ORTHO05D008592 8.7e-09 63.9 99 35.4
MBI14_g02865_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 1.1e-08 63.5 98 32.7
Gohir.A09G152400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.5e-08 63.2 40 60.0
Gohir.D09G148100 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.5e-08 63.2 40 60.0
Gorai.006G169100 Gossypium raimondii HOM05D006892 ORTHO05D008592 1.5e-08 63.2 40 60.0
Gohir.D04G125400 Gossypium hirsutum HOM05D006892 ORTHO05D008592 3.3e-08 62.0 42 61.9
Gorai.012G108500 Gossypium raimondii HOM05D006892 ORTHO05D008592 3.3e-08 62.0 42 61.9
Nn2g13528 Nelumbo nucifera HOM05D006892 ORTHO05D008592 3.3e-08 62.0 42 66.7
TPR.G34921 Trifolium pratense HOM05D006892 ORTHO05D008592 3.3e-08 62.0 100 36.0
Sed0015200 Sechium edule HOM05D006892 ORTHO05D008592 4.3e-08 61.6 48 56.2
Atru.chr8.2090 Acer truncatum HOM05D006892 ORTHO05D008592 7.3e-08 60.8 98 34.7
Lj3g0005144 Lotus japonicus HOM05D006892 ORTHO05D008592 7.3e-08 60.8 97 34.0
MBI14_g02866_MAGBIO Magnolia biondii HOM05D006892 ORTHO05D008592 7.3e-08 60.8 98 31.6
Thecc.05G029200 Theobroma cacao HOM05D006892 ORTHO05D008592 7.3e-08 60.8 40 57.5
Thecc.10G031400 Theobroma cacao HOM05D006892 ORTHO05D008592 7.3e-08 60.8 37 64.9
arahy.Tifrunner.gnm1.ann1.KB6CC9 Arachis hypogaea HOM05D006892 ORTHO05D008592 9.6e-08 60.5 40 55.0
arahy.Tifrunner.gnm1.ann1.KX701I Arachis hypogaea HOM05D006892 ORTHO05D008592 9.6e-08 60.5 40 55.0
Eucgr.G02997 Eucalyptus grandis HOM05D006892 ORTHO05D008592 9.6e-08 60.5 36 63.9
Gohir.A04G085600 Gossypium hirsutum HOM05D006892 ORTHO05D008592 1.3e-07 60.1 42 59.5
DCAR_028810 Daucus carota HOM05D006892 ORTHO05D008592 1.6e-07 59.7 41 56.1
Glyma.03G073200 Glycine max HOM05D006892 ORTHO05D008592 1.6e-07 59.7 40 57.5
ClCG04G007580 Citrullus lanatus HOM05D006892 ORTHO05D008592 2.1e-07 59.3 48 47.9
Lj6g0007525 Lotus japonicus HOM05D006892 ORTHO05D008592 2.1e-07 59.3 36 63.9
MBI14_g02869_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.1e-07 59.3 58 41.4
CSS0020330 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 2.8e-07 58.9 41 58.5
Eucgr.G02995 Eucalyptus grandis HOM05D006892 ORTHO05D008592 2.8e-07 58.9 36 63.9
CSS0005500 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 3.6e-07 58.5 42 57.1
COL.COLO4_36543 Corchorus olitorius HOM05D006892 ORTHO05D008592 3.6e-07 58.5 37 64.9
HPP92_019858 Vanilla planifolia HOM05D006892 ORTHO05D008592 3.6e-07 58.5 33 69.7
MD04G1138900 Malus domestica HOM05D006892 ORTHO05D008592 4.8e-07 58.2 112 36.6
Ciclev10013234m.g Citrus clementina HOM05D006892 ORTHO05D008592 6.2e-07 57.8 37 56.8
HanXRQChr08g0221291 Helianthus annuus HOM05D006892 ORTHO05D008592 6.2e-07 57.8 41 56.1
CSS0009632 Camellia sinensis var. sinensis HOM05D006892 ORTHO05D008592 8.1e-07 57.4 41 58.5
CiPaw.09G201300 Carya illinoinensis HOM05D006892 ORTHO05D008592 8.1e-07 57.4 106 34.0
Actinidia02903 Actinidia chinensis HOM05D006892 ORTHO05D008592 1.1e-06 57.0 112 33.0
CDE02G2266 Ceratophyllum demersum HOM05D006892 ORTHO05D008592 1.1e-06 57.0 41 56.1
Medtr3g069540 Medicago truncatula HOM05D006892 ORTHO05D008592 1.1e-06 57.0 107 29.9
Manes.09G098400 Manihot esculenta HOM05D006892 ORTHO05D008592 1.4e-06 56.6 41 56.1
SalBow6G4181 Salvia bowleyana HOM05D061281 ORTHO05D008592 1.4e-06 56.6 41 53.7
SalBow6G4537 Salvia bowleyana HOM05D061281 ORTHO05D008592 1.4e-06 56.6 41 53.7
Sopen03g027280 Solanum pennellii HOM05D006892 ORTHO05D008592 4.0e-06 55.1 55 40.0
CiPaw.10G149300 Carya illinoinensis HOM05D006892 ORTHO05D008592 5.3e-06 54.7 106 34.9
MELO3C033485.2 Cucumis melo HOM05D006892 ORTHO05D008592 6.9e-06 54.3 48 43.8
HanXRQChr05g0156901 Helianthus annuus HOM05D006892 ORTHO05D008592 6.9e-06 54.3 45 46.7
PGSC0003DMG400024270 Solanum tuberosum HOM05D006892 ORTHO05D008592 6.9e-06 54.3 40 55.0
Cpa.g.sc56.60 Carica papaya HOM05D006892 ORTHO05D008592 9.0e-06 53.9 42 47.6
Glyma.18G033400 Glycine max HOM05D006892 ORTHO05D008592 9.0e-06 53.9 110 33.6
Manes.08G082100 Manihot esculenta HOM05D006892 ORTHO05D008592 9.0e-06 53.9 41 51.2


User provided reference genes

Program Settings