Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G042900 Populus trichocarpa HOM05D010162 ORTHO05D010383 3.9e-128 461.5 227 100.0
Potri.010G219300 Populus trichocarpa HOM05D010162 ORTHO05D010383 6.5e-67 258.1 216 67.1
COL.COLO4_23723 Corchorus olitorius HOM05D010162 ORTHO05D010383 1.6e-20 104.0 223 36.8
Duzib128G1476 Durio zibethinus HOM05D010162 ORTHO05D010383 3.5e-20 102.8 228 35.5
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 5.9e-20 102.1 217 37.3
QL08p056651 Quercus lobata HOM05D000336 ORTHO05D002705 2.3e-19 100.1 230 36.1
Cfa001603 Carpinus fangiana HOM05D010935 ORTHO05D010383 9.5e-18 94.7 203 36.5
MD01G1111500 Malus domestica HOM05D010935 ORTHO05D010383 3.6e-17 92.8 220 33.2
CiPaw.01G275300 Carya illinoinensis HOM05D010935 ORTHO05D010383 4.7e-17 92.4 228 35.5
Prupe.2G217100 Prunus persica HOM05D010935 ORTHO05D010383 6.1e-17 92.0 160 38.1
Duzib114G0652 Durio zibethinus HOM05D010162 ORTHO05D010383 1.8e-16 90.5 226 36.3
Gohir.A13G024900 Gossypium hirsutum HOM05D010162 ORTHO05D010383 8.3e-14 81.6 221 33.5
MD07G1177700 Malus domestica HOM05D010935 ORTHO05D010383 8.3e-14 81.6 220 32.3
Prupe.2G217000 Prunus persica HOM05D010935 ORTHO05D010383 1.8e-13 80.5 220 35.5
RcHm_v2.0_Chr1g0363951 Rosa chinensis HOM05D010935 ORTHO05D010383 3.2e-13 79.7 226 34.1
MD07G1177600 Malus domestica HOM05D010935 ORTHO05D010383 9.2e-13 78.2 234 35.0
Gorai.013G026600 Gossypium raimondii HOM05D010162 ORTHO05D010383 7.8e-12 75.1 222 32.9
ClCG09G020520 Citrullus lanatus HOM05D040659 ORTHO05D010383 1.7e-11 73.9 223 33.2
Manes.10G044000 Manihot esculenta HOM05D010162 ORTHO05D010383 3.9e-11 72.8 211 32.2
Manes.10G043900 Manihot esculenta HOM05D010162 ORTHO05D010383 6.6e-11 72.0 211 31.8
FvH4_7g20000 Fragaria vesca HOM05D010935 ORTHO05D010383 8.6e-11 71.6 220 33.2
FAN03G0405 Fragaria x ananassa HOM05D010935 ORTHO05D010383 8.6e-11 71.6 220 33.2
Gohir.D13G023700 Gossypium hirsutum HOM05D010162 ORTHO05D010383 8.6e-11 71.6 214 31.3
FvH4_7g20010 Fragaria vesca HOM05D010935 ORTHO05D010383 1.1e-10 71.2 218 28.0
Gohir.A13G024800 Gossypium hirsutum HOM05D010162 ORTHO05D010383 1.1e-10 71.2 217 30.9
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.1e-10 71.2 255 31.4
RcHm_v2.0_Chr1g0363961 Rosa chinensis HOM05D010935 ORTHO05D010383 1.9e-10 70.5 216 31.9
Gorai.002G143100 Gossypium raimondii HOM05D010162 ORTHO05D010383 3.3e-10 69.7 201 32.8
Gorai.013G026500 Gossypium raimondii HOM05D010162 ORTHO05D010383 3.3e-10 69.7 231 29.9
CsaV3_5G025880 Cucumis sativus L. HOM05D040659 ORTHO05D010383 4.3e-10 69.3 222 33.3
Eucgr.G02810 Eucalyptus grandis HOM05D010935 ORTHO05D010383 4.3e-10 69.3 224 30.8
FAN03G3034 Fragaria x ananassa HOM05D010935 ORTHO05D010383 4.3e-10 69.3 219 28.3
Gohir.D13G023650 Gossypium hirsutum HOM05D010162 ORTHO05D010383 5.6e-10 68.9 229 30.1
MELO3C002880.2 Cucumis melo HOM05D040659 ORTHO05D010383 7.3e-10 68.6 213 32.9
FAN06G0306 Fragaria x ananassa HOM05D010935 ORTHO05D010383 7.3e-10 68.6 219 28.3
Gohir.D01G117600 Gossypium hirsutum HOM05D010162 ORTHO05D010383 7.3e-10 68.6 201 32.3
Manes.10G044100 Manihot esculenta HOM05D010162 ORTHO05D010383 1.6e-09 67.4 214 31.8
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 2.8e-09 66.6 250 27.2
Manes.10G043800 Manihot esculenta HOM05D010162 ORTHO05D010383 6.2e-09 65.5 219 31.5
Atru.chr12.703 Acer truncatum HOM05D043902 ORTHO05D010383 8.0e-09 65.1 111 37.8
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 1.0e-08 64.7 234 28.6
Atru.chr12.713 Acer truncatum HOM05D043902 ORTHO05D010383 1.8e-08 63.9 111 36.9
FAN10G0666 Fragaria x ananassa HOM05D010935 ORTHO05D010383 1.8e-08 63.9 222 28.8
Cpa.g.sc53.28 Carica papaya HOM05D003020 ORTHO05D003226 4.0e-08 62.8 268 28.0
Gohir.D13G023750 Gossypium hirsutum HOM05D010162 ORTHO05D010383 5.2e-08 62.4 239 30.1
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 8.9e-08 61.6 229 30.6
Manes.10G043400 Manihot esculenta HOM05D010935 ORTHO05D010383 1.2e-07 61.2 214 30.4
FAN01G2770 Fragaria x ananassa HOM05D010935 ORTHO05D010383 1.5e-07 60.8 212 28.3
Gohir.D13G023725 Gossypium hirsutum HOM05D010162 ORTHO05D010383 1.5e-07 60.8 239 29.7
Actinidia02960 Actinidia chinensis HOM05D003020 ORTHO05D003226 2.0e-07 60.5 200 28.5
Gohir.A13G024950 Gossypium hirsutum HOM05D010162 ORTHO05D010383 2.0e-07 60.5 231 29.0
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.0e-07 60.5 253 29.6
Gorai.013G026700 Gossypium raimondii HOM05D010162 ORTHO05D010383 3.4e-07 59.7 240 30.4
Actinidia02961 Actinidia chinensis HOM05D003020 ORTHO05D003226 4.4e-07 59.3 237 27.8
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 7.5e-07 58.5 251 29.1
Lalb_Chr03g0036011 Lupinus albus HOM05D003020 ORTHO05D003226 7.5e-07 58.5 174 30.5
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.5e-07 58.5 257 27.2
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 9.8e-07 58.2 230 27.4
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 1.7e-06 57.4 210 30.0
Dinv11798 Davidia involucrata HOM05D003020 ORTHO05D003226 2.2e-06 57.0 222 27.9
Hma1.2p1_2080F.1_g313480 Hydrangea macrophylla HOM05D011460 ORTHO05D010383 4.9e-06 55.8 238 26.5
Nitab4.5_0021955g0010 Nicotiana tabacum HOM05D011460 ORTHO05D010383 6.4e-06 55.5 183 25.1


User provided reference genes

Program Settings