Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G039901 Populus trichocarpa HOM05D008287 ORTHO05D010110 8.7e-74 280.4 163 100.0
Potri.010G222400 Populus trichocarpa HOM05D008287 ORTHO05D010110 1.7e-16 90.1 92 70.7
Sabra10G0172000 Salix brachista HOM05D008287 ORTHO05D010110 4.9e-16 88.6 90 54.4
Sabra08G0027300 Salix brachista HOM05D008287 ORTHO05D010110 5.0e-13 78.6 163 49.1
Manes.10G045900 Manihot esculenta HOM05D008287 ORTHO05D010110 1.1e-12 77.4 83 48.2
Actinidia38852 Actinidia chinensis HOM05D008287 ORTHO05D010110 2.5e-12 76.3 83 42.2
Atru.chr12.751 Acer truncatum HOM05D008287 ORTHO05D010110 7.3e-12 74.7 87 44.8
MSTRG.9186 Avicennia marina HOM05D008287 ORTHO05D010110 8.0e-11 71.2 83 43.4
Duzib114G0252 Durio zibethinus HOM05D008287 ORTHO05D010110 8.0e-11 71.2 84 41.7
Sopen04g019400 Solanum pennellii HOM05D008287 ORTHO05D010110 1.1e-10 70.9 83 41.0
Atru.chr12.776 Acer truncatum HOM05D008287 ORTHO05D010110 1.8e-10 70.1 93 41.9
Gohir.A13G024200 Gossypium hirsutum HOM05D008287 ORTHO05D010110 1.8e-10 70.1 84 41.7
Ciclev10033160m.g Citrus clementina HOM05D008287 ORTHO05D010110 2.3e-10 69.7 93 51.6
Gorai.013G025800 Gossypium raimondii HOM05D008287 ORTHO05D010110 2.3e-10 69.7 91 40.7
Hma1.2p1_0063F.1_g034480 Hydrangea macrophylla HOM05D008287 ORTHO05D010110 3.1e-10 69.3 83 42.2
Gohir.D13G023100 Gossypium hirsutum HOM05D008287 ORTHO05D010110 4.0e-10 68.9 84 40.5
TAR629G1172 Trochodendron aralioides HOM05D008287 ORTHO05D010110 4.0e-10 68.9 92 40.2
Migut.F02005 Erythranthe guttata HOM05D008287 ORTHO05D010110 6.8e-10 68.2 83 44.6
PGSC0003DMG400012876 Solanum tuberosum HOM05D008287 ORTHO05D010110 6.8e-10 68.2 83 38.6
Nitab4.5_0000575g0160 Nicotiana tabacum HOM05D008287 ORTHO05D010110 1.5e-09 67.0 83 55.4
Thecc.10G073600 Theobroma cacao HOM05D008287 ORTHO05D010110 1.5e-09 67.0 83 41.0
Solyc04g049407.1 Solanum lycopersicum HOM05D008287 ORTHO05D010110 2.6e-09 66.2 97 38.1
Aqoxy1G01238 Aquilegia oxysepala HOM05D008287 ORTHO05D010110 3.4e-09 65.9 90 37.8
Sc09g0006380 Simmondsia chinensis HOM05D008287 ORTHO05D010110 3.4e-09 65.9 89 37.1
HanXRQChr01g0011461 Helianthus annuus HOM05D008287 ORTHO05D010110 7.5e-09 64.7 85 34.1
Nn2g10792 Nelumbo nucifera HOM05D008287 ORTHO05D010110 7.5e-09 64.7 92 37.0
MD01G1108600 Malus domestica HOM05D008287 ORTHO05D010110 1.3e-08 63.9 97 40.2
CiPaw.01G272900 Carya illinoinensis HOM05D008287 ORTHO05D010110 2.2e-08 63.2 97 42.3
Rhsim09G0151900 Rhododendron simsii HOM05D008287 ORTHO05D010110 2.2e-08 63.2 101 34.7
Sabra17G0123100 Salix brachista HOM05D008287 ORTHO05D010110 4.9e-08 62.0 41 70.7
Prupe.2G213800 Prunus persica HOM05D008287 ORTHO05D010110 6.4e-08 61.6 91 35.2
Cc06_g14360 Coffea canephora HOM05D008287 ORTHO05D010110 8.3e-08 61.2 89 48.3
Phvul.004G082500 Phaseolus vulgaris HOM05D008287 ORTHO05D010110 8.3e-08 61.2 83 37.3
TPR.G822 Trifolium pratense HOM05D008287 ORTHO05D010110 8.3e-08 61.2 83 38.6
unitig_899.g14438 Utricularia gibba HOM05D008287 ORTHO05D010110 1.4e-07 60.5 85 35.3
Nitab4.5_0010206g0030 Nicotiana tabacum HOM05D008287 ORTHO05D010110 3.2e-07 59.3 108 46.3
Lsat_1_v5_gn_2_114761 Lactuca sativa HOM05D008287 ORTHO05D010110 5.4e-07 58.5 91 46.2
Lalb_Chr19g0129701 Lupinus albus HOM05D008287 ORTHO05D010110 5.4e-07 58.5 83 33.7
ClCG05G021010 Citrullus lanatus HOM05D008287 ORTHO05D010110 7.1e-07 58.2 91 34.1
Hund12046 Selenicereus undatus HOM05D008287 ORTHO05D010110 7.1e-07 58.2 91 37.4
Glyma.16G154900 Glycine max HOM05D008287 ORTHO05D010110 1.2e-06 57.4 94 37.2
MBI10_g13401_MAGBIO Magnolia biondii HOM05D008287 ORTHO05D010110 1.2e-06 57.4 89 39.3
ECA238G2524 Erigeron canadensis HOM05D008287 ORTHO05D010110 2.7e-06 56.2 93 33.3
Glyma.02G073500 Glycine max HOM05D008287 ORTHO05D010110 3.5e-06 55.8 85 34.1
Eucgr.G02829 Eucalyptus grandis HOM05D055458 ORTHO05D010110 4.6e-06 55.5 88 43.2
CSS0035042 Camellia sinensis var. sinensis HOM05D008287 ORTHO05D010110 6.0e-06 55.1 32 75.0


User provided reference genes

Program Settings