Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 2.2e-81 305.4 142 100.0
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 2.0e-50 202.6 109 89.9
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 2.9e-49 198.7 109 89.0
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 5.5e-48 194.5 109 85.3
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 5.5e-48 194.5 109 83.5
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 1.6e-47 193.0 109 84.4
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 1.6e-47 193.0 109 83.5
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 1.6e-47 193.0 109 83.5
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 2.7e-47 192.2 108 85.2
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 3.6e-47 191.8 109 82.6
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 3.6e-47 191.8 109 83.5
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 3.6e-47 191.8 109 82.6
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 4.6e-47 191.4 109 83.5
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 4.6e-47 191.4 109 82.6
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 4.6e-47 191.4 109 82.6
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 4.6e-47 191.4 109 82.6
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 6.1e-47 191.0 109 82.6
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.0e-46 190.3 109 82.6
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 1.8e-46 189.5 109 81.7
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 2.3e-46 189.1 108 82.4
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 3.0e-46 188.7 109 81.7
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 3.0e-46 188.7 109 81.7
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 3.9e-46 188.3 109 81.7
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 3.9e-46 188.3 109 81.7
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 5.1e-46 188.0 109 81.7
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 6.7e-46 187.6 109 80.7
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 6.7e-46 187.6 109 80.7
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 8.8e-46 187.2 109 79.8
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 8.8e-46 187.2 109 82.6
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 1.1e-45 186.8 109 80.7
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 2.0e-45 186.0 109 80.7
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 2.0e-45 186.0 109 79.8
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 3.3e-45 185.3 109 82.6
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 3.3e-45 185.3 109 82.6
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 3.3e-45 185.3 109 80.7
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 4.4e-45 184.9 109 81.7
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 4.4e-45 184.9 109 79.8
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 5.7e-45 184.5 109 80.7
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 7.4e-45 184.1 109 80.7
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 7.4e-45 184.1 109 79.8
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 7.4e-45 184.1 109 79.8
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 9.7e-45 183.7 109 82.6
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 9.7e-45 183.7 109 78.9
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 9.7e-45 183.7 109 80.7
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 1.3e-44 183.3 109 80.7
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 1.3e-44 183.3 109 80.7
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 1.3e-44 183.3 109 80.7
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 1.3e-44 183.3 109 79.8
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 1.3e-44 183.3 109 79.8
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 1.7e-44 183.0 109 80.7
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 1.7e-44 183.0 109 79.8
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 2.2e-44 182.6 109 80.7
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 2.2e-44 182.6 109 81.7
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 2.8e-44 182.2 109 78.9
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 2.8e-44 182.2 109 79.8
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 2.8e-44 182.2 109 79.8
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 3.7e-44 181.8 109 80.7
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 3.7e-44 181.8 109 78.9
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 4.8e-44 181.4 109 78.9
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 4.8e-44 181.4 109 78.9
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 6.3e-44 181.0 109 80.7
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 8.2e-44 180.6 109 79.8
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 1.1e-43 180.3 109 78.9
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 1.4e-43 179.9 138 66.7
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 1.8e-43 179.5 108 78.7
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 2.4e-43 179.1 109 76.1
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 2.4e-43 179.1 138 66.7
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 3.1e-43 178.7 109 76.1
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 3.1e-43 178.7 109 78.0
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 4.1e-43 178.3 109 77.1
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 4.1e-43 178.3 109 81.7
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 4.1e-43 178.3 108 77.8
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 4.1e-43 178.3 112 73.2
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 5.3e-43 177.9 109 76.1
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 5.3e-43 177.9 109 76.1
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 5.3e-43 177.9 109 76.1
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 5.3e-43 177.9 109 81.7
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 5.3e-43 177.9 109 81.7
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 6.9e-43 177.6 138 65.9
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 6.9e-43 177.6 109 79.8
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 6.9e-43 177.6 108 78.7
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 6.9e-43 177.6 120 73.3
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 9.1e-43 177.2 109 75.2
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 9.1e-43 177.2 138 65.9
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 9.1e-43 177.2 109 76.1
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 1.2e-42 176.8 108 78.7
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 1.2e-42 176.8 108 78.7
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 1.5e-42 176.4 109 75.2
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 2.6e-42 175.6 108 75.0
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 3.4e-42 175.3 137 66.4
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 4.5e-42 174.9 109 76.1
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 5.9e-42 174.5 109 75.2
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 5.9e-42 174.5 109 75.2
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 7.7e-42 174.1 109 77.1
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 7.7e-42 174.1 138 65.2
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 1.0e-41 173.7 138 65.2
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 1.0e-41 173.7 108 76.9
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 1.0e-41 173.7 109 76.1
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 1.3e-41 173.3 109 74.3
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 1.3e-41 173.3 109 75.2
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 2.2e-41 172.6 109 74.3
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 6.5e-41 171.0 109 73.4
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 6.5e-41 171.0 109 73.4
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 6.5e-41 171.0 109 73.4
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 1.1e-40 170.2 109 72.5
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 1.4e-40 169.9 109 73.4
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.4e-40 169.9 109 74.3
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 1.9e-40 169.5 109 72.5
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 3.2e-40 168.7 108 75.0
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 3.2e-40 168.7 109 73.4
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 3.2e-40 168.7 109 73.4
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 4.2e-40 168.3 109 73.4
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 4.2e-40 168.3 108 74.1
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 5.5e-40 167.9 108 74.1
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 5.5e-40 167.9 108 75.0
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 9.4e-40 167.2 109 73.4
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 1.6e-39 166.4 107 74.8
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 3.6e-39 165.2 136 64.0
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 1.4e-38 163.3 149 59.1
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 2.6e-37 159.1 195 47.2
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 1.3e-36 156.8 118 72.0
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 4.5e-34 148.3 136 61.0
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 2.1e-31 139.4 109 65.1
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 5.2e-30 134.8 110 63.6
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 1.2e-29 133.7 84 77.4
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 6.3e-28 127.9 79 77.2
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 1.4e-27 126.7 64 92.2
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 1.9e-24 116.3 76 76.3
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 2.3e-22 109.4 106 51.9
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 1.2e-21 107.1 298 29.9
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 7.5e-21 104.4 64 78.1
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 1.4e-19 100.1 107 51.4
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 3.1e-19 99.0 95 55.8
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 1.6e-18 96.7 139 39.6
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 3.3e-16 89.0 56 73.2
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 1.8e-14 83.2 41 85.4
Peaxi162Scf00959g00416 Petunia axillaris HOM05D005215 ORTHO05D006382 1.2e-10 70.5 42 78.6
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 5.0e-09 65.1 31 93.5
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 6.1e-07 58.2 30 83.3


User provided reference genes

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