Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 5.6e-62 240.7 118 100.0
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 8.6e-39 163.7 83 91.6
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 3.5e-32 141.7 83 77.1
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 4.6e-32 141.4 81 76.5
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 4.6e-32 141.4 81 77.8
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 2.5e-30 135.6 84 70.2
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 3.3e-30 135.2 82 72.0
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 7.3e-30 134.0 81 74.1
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 7.3e-30 134.0 83 71.1
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 9.6e-30 133.7 109 59.6
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 1.2e-29 133.3 82 70.7
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 1.6e-29 132.9 82 70.7
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.6e-29 132.9 82 70.7
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 1.6e-29 132.9 81 76.5
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 1.6e-29 132.9 82 68.3
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 2.1e-29 132.5 81 74.1
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 4.7e-29 131.3 83 71.1
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 4.7e-29 131.3 82 68.3
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 4.7e-29 131.3 82 69.5
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 4.7e-29 131.3 80 72.5
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 6.2e-29 131.0 82 69.5
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 6.2e-29 131.0 82 68.3
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 8.1e-29 130.6 82 70.7
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 8.1e-29 130.6 83 66.3
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 8.1e-29 130.6 81 70.4
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 8.1e-29 130.6 81 70.4
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 1.1e-28 130.2 82 68.3
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 1.1e-28 130.2 82 68.3
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 1.1e-28 130.2 82 68.3
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 1.1e-28 130.2 82 70.7
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.1e-28 130.2 82 68.3
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 1.1e-28 130.2 80 66.2
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 1.4e-28 129.8 79 72.2
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 1.4e-28 129.8 80 70.0
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 1.8e-28 129.4 82 69.5
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 1.8e-28 129.4 82 70.7
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.8e-28 129.4 83 69.9
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 1.8e-28 129.4 80 70.0
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 2.4e-28 129.0 82 69.5
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 2.4e-28 129.0 83 69.9
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 2.4e-28 129.0 83 69.9
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 3.1e-28 128.6 83 67.5
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 3.1e-28 128.6 81 66.7
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 3.1e-28 128.6 83 67.5
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 5.2e-28 127.9 80 68.8
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 5.2e-28 127.9 82 69.5
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 5.2e-28 127.9 81 69.1
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 5.2e-28 127.9 80 67.5
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 6.9e-28 127.5 83 71.1
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 6.9e-28 127.5 81 71.6
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 8.9e-28 127.1 83 68.7
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 8.9e-28 127.1 83 68.7
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 1.2e-27 126.7 82 67.1
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 1.2e-27 126.7 82 67.1
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 1.2e-27 126.7 79 68.4
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 2.0e-27 125.9 81 65.4
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 2.0e-27 125.9 83 68.7
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 2.6e-27 125.6 81 66.7
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 2.6e-27 125.6 79 68.4
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 3.4e-27 125.2 83 67.5
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 3.4e-27 125.2 81 65.4
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 3.4e-27 125.2 88 67.0
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 4.4e-27 124.8 83 67.5
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 5.8e-27 124.4 83 65.1
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 5.8e-27 124.4 80 66.2
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 7.6e-27 124.0 81 66.7
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 1.3e-26 123.2 83 63.9
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 1.3e-26 123.2 81 64.2
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 1.7e-26 122.9 79 65.8
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 2.2e-26 122.5 80 72.5
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 2.2e-26 122.5 83 68.7
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 2.9e-26 122.1 80 66.2
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 2.9e-26 122.1 81 69.1
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 2.9e-26 122.1 79 67.1
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 3.8e-26 121.7 81 67.9
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 6.4e-26 120.9 80 66.2
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 6.4e-26 120.9 81 63.0
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 6.4e-26 120.9 81 69.1
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 8.4e-26 120.6 81 66.7
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 1.4e-25 119.8 83 67.5
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 1.9e-25 119.4 81 64.2
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 1.9e-25 119.4 81 63.0
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 3.2e-25 118.6 83 66.3
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 3.2e-25 118.6 84 61.9
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 7.1e-25 117.5 79 64.6
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 1.2e-24 116.7 81 66.7
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 2.7e-24 115.5 81 60.5
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 4.6e-24 114.8 80 67.5
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 1.7e-23 112.8 80 62.5
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.1e-22 110.2 82 58.5
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 9.0e-20 100.5 80 56.2
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 9.0e-20 100.5 80 57.5
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 9.0e-20 100.5 81 56.8
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 1.2e-19 100.1 82 54.9
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.6e-19 99.0 79 57.0
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 9.9e-19 97.1 79 55.7
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 2.4e-17 92.4 79 53.2
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 9.3e-17 90.5 63 66.7
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 1.2e-16 90.1 63 65.1
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 1.5e-14 83.2 96 45.8
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 2.2e-10 69.3 49 63.3
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 1.9e-09 66.2 37 78.4
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.1e-08 62.8 45 60.0
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 4.6e-08 61.6 38 68.4
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 8.7e-07 57.4 50 54.0


User provided reference genes

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