Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 4.9e-193 677.9 423 100.0
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 1.4e-134 483.8 362 84.5
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 4.2e-112 409.1 368 73.4
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 4.8e-100 369.0 368 69.6
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 7.3e-64 248.8 378 44.4
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 1.9e-59 234.2 341 44.9
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 1.9e-56 224.2 387 43.4
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 2.7e-50 203.8 409 39.9
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 6.0e-50 202.6 398 39.2
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.3e-49 201.4 398 39.2
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 2.3e-49 200.7 386 40.9
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 3.9e-49 199.9 400 38.0
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 5.6e-48 196.1 349 41.8
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.3e-47 194.9 339 41.3
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 6.2e-47 192.6 378 41.3
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 1.4e-46 191.4 395 39.7
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 2.4e-46 190.7 392 38.8
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 1.5e-45 188.0 381 39.1
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 2.0e-45 187.6 356 40.2
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 9.3e-43 178.7 321 40.2
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 1.5e-40 171.4 389 37.8
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.6e-39 167.9 332 38.9
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 1.6e-39 167.9 392 34.4
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 8.1e-39 165.6 331 40.5
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 1.8e-38 164.5 372 37.9
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 1.8e-38 164.5 392 36.2
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 4.0e-38 163.3 296 40.9
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 9.0e-38 162.2 401 35.2
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.2e-37 161.8 415 34.9
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 1.2e-37 161.8 381 34.4
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 7.6e-37 159.1 269 42.4
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 1.3e-36 158.3 357 37.3
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 1.7e-36 157.9 342 37.4
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 2.9e-36 157.1 315 37.5
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.9e-36 157.1 381 37.0
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 6.4e-36 156.0 306 38.6
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 6.4e-36 156.0 338 34.0
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 1.1e-35 155.2 345 36.5
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 1.4e-35 154.8 295 39.0
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 1.4e-35 154.8 379 36.7
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 2.5e-35 154.1 393 34.6
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 5.5e-35 152.9 382 34.6
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 7.1e-35 152.5 285 38.2
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 9.3e-35 152.1 365 38.9
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 4.6e-34 149.8 307 39.4
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 6.0e-34 149.4 364 37.4
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 6.0e-34 149.4 386 36.0
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 1.3e-33 148.3 334 37.1
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 1.3e-33 148.3 337 35.9
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.8e-33 147.9 324 37.7
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 2.3e-33 147.5 379 35.1
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 5.1e-33 146.4 384 33.6
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 6.7e-33 146.0 353 36.5
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 6.7e-33 146.0 400 34.5
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 8.7e-33 145.6 355 35.5
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 8.7e-33 145.6 356 37.9
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 8.7e-33 145.6 340 35.6
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 1.5e-32 144.8 353 36.5
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 1.9e-32 144.4 325 36.0
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 1.6e-31 141.4 346 34.1
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 4.8e-31 139.8 293 36.2
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 8.2e-31 139.0 379 35.9
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 3.1e-30 137.1 391 36.1
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 6.9e-30 136.0 308 34.7
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 1.5e-29 134.8 324 36.1
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 2.6e-29 134.0 385 33.5
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 7.6e-29 132.5 382 34.3
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.0e-28 132.1 359 34.8
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 2.9e-28 130.6 332 38.9
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 4.9e-28 129.8 362 34.0
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 4.2e-27 126.7 405 33.3
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 4.2e-27 126.7 364 32.7
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 5.5e-27 126.3 330 33.6
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 7.1e-27 125.9 274 36.1
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 9.3e-27 125.6 342 34.8
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 1.2e-26 125.2 336 36.6
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 1.6e-26 124.8 286 33.9
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 2.1e-26 124.4 369 36.6
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 2.7e-26 124.0 380 36.6
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 1.0e-25 122.1 343 33.8
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 1.0e-25 122.1 329 35.3
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 2.3e-25 120.9 340 33.2
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 6.7e-25 119.4 341 32.8
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 6.7e-25 119.4 321 38.6
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 1.5e-24 118.2 303 34.3
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 1.9e-24 117.9 330 32.4
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 4.3e-24 116.7 304 33.9
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 2.2e-23 114.4 348 32.2
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.8e-23 114.0 414 31.9
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 1.1e-22 112.1 372 28.2
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 3.1e-22 110.5 360 31.4
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 5.3e-22 109.8 291 33.7
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 5.3e-22 109.8 337 34.1
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 1.5e-21 108.2 305 30.5
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 1.7e-20 104.8 325 29.5
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 5.0e-20 103.2 357 34.2
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 6.5e-20 102.8 338 33.1
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 2.5e-19 100.9 258 36.0
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 5.5e-19 99.8 231 35.9
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 1.2e-18 98.6 259 32.8
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 8.5e-12 75.9 261 26.8
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 5.5e-11 73.2 317 28.1
BcaB05g23323 Brassica carinata HOM05D006718 ORTHO05D008492 3.3e-08 63.9 135 34.8
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 7.4e-08 62.8 110 41.8
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 1.1e-06 58.9 303 24.4
CBR_g22941 Chara braunii HOM05D006718 ORTHO05D008492 3.1e-06 57.4 282 25.9


User provided reference genes

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