Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G008626 Populus trichocarpa HOM05D001448 ORTHO05D005781 1.3e-244 849.4 434 100.0
Potri.002G041300 Populus trichocarpa HOM05D001448 ORTHO05D005781 1.3e-44 184.9 167 59.3
Sabra02G0032900 Salix brachista HOM05D001448 ORTHO05D005781 3.6e-42 176.8 208 50.0
Manes.05G087700 Manihot esculenta HOM05D001448 ORTHO05D005781 6.4e-39 166.0 199 49.7
RcHm_v2.0_Chr6g0288861 Rosa chinensis HOM05D001448 ORTHO05D005781 7.8e-37 159.1 257 44.0
Duzib138G0307 Durio zibethinus HOM05D001448 ORTHO05D005781 1.5e-35 154.8 195 49.2
Atru.chr5.1640 Acer truncatum HOM05D001448 ORTHO05D005781 1.9e-35 154.5 182 50.5
Thecc.01G262000 Theobroma cacao HOM05D001448 ORTHO05D005781 1.6e-34 151.4 220 45.5
Cpa.g.sc50.45 Carica papaya HOM05D001448 ORTHO05D005781 2.1e-34 151.0 206 46.6
QL09p037774 Quercus lobata HOM05D001448 ORTHO05D005781 2.1e-34 151.0 197 45.7
Prupe.8G227600 Prunus persica HOM05D001448 ORTHO05D005781 6.2e-34 149.4 221 45.2
Haze_24590 Corylus avellana HOM05D001448 ORTHO05D005781 1.1e-33 148.7 220 43.2
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 1.8e-33 147.9 223 42.2
TWI18G1036 Tripterygium wilfordii HOM05D001448 ORTHO05D005781 2.4e-33 147.5 177 50.8
Haze_24594 Corylus avellana HOM05D001448 ORTHO05D005781 3.1e-33 147.1 220 42.7
Ciclev10018683m.g Citrus clementina HOM05D001448 ORTHO05D005781 4.0e-33 146.7 228 45.2
Actinidia09565 Actinidia chinensis HOM05D001448 ORTHO05D005781 2.0e-32 144.4 204 43.1
Gohir.D11G134900 Gossypium hirsutum HOM05D001448 ORTHO05D005781 2.6e-32 144.1 228 42.5
Gohir.A11G129066 Gossypium hirsutum HOM05D001448 ORTHO05D005781 7.6e-32 142.5 228 41.7
GSVIVG01028296001 Vitis vinifera HOM05D001448 ORTHO05D005781 7.6e-32 142.5 184 47.3
Cfa002395 Carpinus fangiana HOM05D001448 ORTHO05D005781 1.3e-31 141.7 218 43.1
MD10G1187800 Malus domestica HOM05D001448 ORTHO05D005781 2.9e-31 140.6 168 49.4
Gorai.007G144300 Gossypium raimondii HOM05D001448 ORTHO05D005781 6.4e-31 139.4 228 42.5
THA.LOC104800882 Tarenaya hassleriana HOM05D001448 ORTHO05D005781 6.4e-31 139.4 202 42.1
Duzib211G0273 Durio zibethinus HOM05D001448 ORTHO05D005781 8.4e-31 139.0 228 43.4
MD05G1201000 Malus domestica HOM05D001448 ORTHO05D005781 1.1e-30 138.7 190 45.8
MELO3C024039.2 Cucumis melo HOM05D001448 ORTHO05D005781 1.4e-30 138.3 191 46.6
ClCG07G000910 Citrullus lanatus HOM05D001448 ORTHO05D005781 1.9e-30 137.9 191 47.1
Lalb_Chr01g0019731 Lupinus albus HOM05D001448 ORTHO05D005781 5.4e-30 136.3 169 47.9
CSS0017569 Camellia sinensis var. sinensis HOM05D001448 ORTHO05D005781 1.6e-29 134.8 187 42.8
CSS0028913 Camellia sinensis var. sinensis HOM05D001448 ORTHO05D005781 1.6e-29 134.8 187 42.8
Aa31LG5G5640 Aethionema arabicum HOM05D001448 ORTHO05D005781 2.1e-29 134.4 188 41.0
CsaV3_3G022600 Cucumis sativus L. HOM05D001448 ORTHO05D005781 2.1e-29 134.4 204 44.6
Nn1g02698 Nelumbo nucifera HOM05D001448 ORTHO05D005781 2.7e-29 134.0 186 43.0
CANSAT01G0590 Cannabis sativa HOM05D001448 ORTHO05D005781 3.5e-29 133.7 163 46.6
Glyma.19G162800 Glycine max HOM05D001448 ORTHO05D005781 1.3e-28 131.7 167 45.5
Lj1g0021166 Lotus japonicus HOM05D001448 ORTHO05D005781 1.7e-28 131.3 232 42.2
Sc24g0003080 Simmondsia chinensis HOM05D001448 ORTHO05D005781 3.0e-28 130.6 214 41.6
BcaB02g10384 Brassica carinata HOM05D001448 ORTHO05D005781 3.9e-28 130.2 209 42.1
Sp4g13800 Schrenkiella parvula HOM05D001448 ORTHO05D005781 3.9e-28 130.2 206 40.3
VMungo1383G0732 Vigna mungo HOM05D001448 ORTHO05D005781 3.9e-28 130.2 229 41.9
COL.COLO4_05599 Corchorus olitorius HOM05D001448 ORTHO05D005781 5.1e-28 129.8 221 38.9
Eucgr.K03285 Eucalyptus grandis HOM05D001448 ORTHO05D005781 5.1e-28 129.8 231 36.4
Sed0017037 Sechium edule HOM05D001448 ORTHO05D005781 5.1e-28 129.8 204 43.1
AT2G31320 Arabidopsis thaliana HOM05D001448 ORTHO05D005781 6.6e-28 129.4 165 43.6
Carub.0004s1263 Capsella rubella HOM05D001448 ORTHO05D005781 6.6e-28 129.4 165 44.8
Lj2C1155G3 Lonicera japonica HOM05D001448 ORTHO05D005781 6.6e-28 129.4 218 38.1
ClCG07G000900 Citrullus lanatus HOM05D001448 ORTHO05D005781 1.1e-27 128.6 191 45.0
PGR044G0051 Punica granatum HOM05D001448 ORTHO05D005781 1.1e-27 128.6 205 41.0
AL4G26550 Arabidopsis lyrata HOM05D001448 ORTHO05D005781 1.5e-27 128.3 223 38.1
Medtr7g096520 Medicago truncatula HOM05D001448 ORTHO05D005781 1.9e-27 127.9 237 39.7
Glyma.03G161300 Glycine max HOM05D001448 ORTHO05D005781 3.3e-27 127.1 166 45.2
CARHR124940 Cardamine hirsuta HOM05D001448 ORTHO05D005781 4.3e-27 126.7 165 43.0
Sc24g0002470 Simmondsia chinensis HOM05D001448 ORTHO05D005781 5.6e-27 126.3 214 41.1
arahy.Tifrunner.gnm1.ann1.84CV5L Arachis hypogaea HOM05D001448 ORTHO05D005781 1.3e-26 125.2 225 40.9
arahy.Tifrunner.gnm1.ann1.BU3W1C Arachis hypogaea HOM05D001448 ORTHO05D005781 1.6e-26 124.8 225 40.9
TPR.G16288 Trifolium pratense HOM05D001448 ORTHO05D005781 1.6e-26 124.8 202 40.6
Dinv22438 Davidia involucrata HOM05D001448 ORTHO05D005781 2.8e-26 124.0 190 39.5
BolC4t23436H Brassica oleracea HOM05D001448 ORTHO05D005781 4.8e-26 123.2 167 45.5
Aqoxy5G00274 Aquilegia oxysepala HOM05D001448 ORTHO05D005781 8.1e-26 122.5 206 37.4
Ah.02g111820 Amaranthus hybridus HOM05D001448 ORTHO05D005781 1.4e-25 121.7 238 36.1
Ca_08659_v3 Cicer arietinum L. HOM05D001448 ORTHO05D005781 1.4e-25 121.7 173 43.4
DCAR_018467 Daucus carota HOM05D001448 ORTHO05D005781 1.4e-25 121.7 169 40.8
FAN24G2205 Fragaria x ananassa HOM05D001448 ORTHO05D005781 1.8e-25 121.3 254 37.4
Thhalv10016190m.g Eutrema salsugineum HOM05D001448 ORTHO05D005781 3.1e-25 120.6 168 42.3
Sopen03g036870 Solanum pennellii HOM05D001448 ORTHO05D005781 5.3e-25 119.8 204 37.7
Rhsim01G0266300 Rhododendron simsii HOM05D001448 ORTHO05D005781 6.9e-25 119.4 224 38.4
Phvul.001G159200 Phaseolus vulgaris HOM05D001448 ORTHO05D005781 9.0e-25 119.0 206 39.8
BcaC02g11226 Brassica carinata HOM05D001448 ORTHO05D005781 1.2e-24 118.6 165 43.6
COL.COLO4_05598 Corchorus olitorius HOM05D001448 ORTHO05D005781 2.0e-24 117.9 172 44.2
Nitab4.5_0004192g0040 Nicotiana tabacum HOM05D001448 ORTHO05D005781 3.4e-24 117.1 208 37.5
BraA05t20358Z Brassica rapa HOM05D001448 ORTHO05D005781 4.4e-24 116.7 212 37.3
vmacro14854 Vaccinium macrocarpon HOM05D001448 ORTHO05D005781 7.6e-24 115.9 240 36.7
CAN.G461.11 Capsicum annuum HOM05D001448 ORTHO05D005781 9.9e-24 115.5 204 36.3
Psat3g059080 Pisum sativum HOM05D001448 ORTHO05D005781 9.9e-24 115.5 176 40.9
Nitab4.5_0000086g0180 Nicotiana tabacum HOM05D001448 ORTHO05D005781 1.3e-23 115.2 208 37.5
A05p14280 Brassica napus HOM05D001448 ORTHO05D005781 2.9e-23 114.0 212 36.3
EL10Ac5g10426 Beta vulgaris HOM05D001448 ORTHO05D005781 4.9e-23 113.2 189 36.5
C04p19030 Brassica napus HOM05D001448 ORTHO05D005781 6.4e-23 112.8 165 42.4
Peaxi162Scf00134g00123 Petunia axillaris HOM05D001448 ORTHO05D005781 8.4e-23 112.5 205 37.6
Migut.D00407 Erythranthe guttata HOM05D001448 ORTHO05D005781 1.1e-22 112.1 255 34.1
PSO017G5465 Papaver somniferum HOM05D001448 ORTHO05D005781 1.1e-22 112.1 210 32.4
FAN15G0786 Fragaria x ananassa HOM05D001448 ORTHO05D005781 1.9e-22 111.3 117 53.8
PSO063G1607 Papaver somniferum HOM05D001448 ORTHO05D005781 2.4e-22 110.9 210 33.3
FvH4_2g21980 Fragaria vesca HOM05D001448 ORTHO05D005781 3.2e-22 110.5 169 40.8
Hund09588 Selenicereus undatus HOM05D001448 ORTHO05D005781 3.2e-22 110.5 164 38.4
Lsat_1_v5_gn_9_8981 Lactuca sativa HOM05D001448 ORTHO05D005781 4.2e-22 110.2 168 41.1
Dinv03004 Davidia involucrata HOM05D001448 ORTHO05D005781 1.2e-21 108.6 197 37.6
MBI18_g10480_MAGBIO Magnolia biondii HOM05D001448 ORTHO05D005781 1.6e-21 108.2 196 38.8
TWI18G1083 Tripterygium wilfordii HOM05D001448 ORTHO05D005781 2.7e-21 107.5 98 57.1
MBI18_g10474_MAGBIO Magnolia biondii HOM05D001448 ORTHO05D005781 7.9e-21 105.9 176 41.5
FAN20G0519 Fragaria x ananassa HOM05D001448 ORTHO05D005781 1.7e-20 104.8 117 51.3
Lj2g0018286 Lotus japonicus HOM05D001448 ORTHO05D005781 2.5e-19 100.9 231 35.9
HanXRQChr10g0281131 Helianthus annuus HOM05D001448 ORTHO05D005781 5.6e-19 99.8 175 34.9
SalBow4G1745 Salvia bowleyana HOM05D001448 ORTHO05D005781 5.6e-19 99.8 220 33.2
Cc01_g18530 Coffea canephora HOM05D001448 ORTHO05D005781 1.6e-18 98.2 227 33.0
Peaxi162Scf00751g00223 Petunia axillaris HOM05D001448 ORTHO05D005781 2.1e-18 97.8 209 35.9
SalBow4G1626 Salvia bowleyana HOM05D001448 ORTHO05D005781 3.6e-18 97.1 220 32.7
ATR0680G113 Amborella trichopoda HOM05D001448 ORTHO05D005781 6.2e-18 96.3 173 31.2
SGA_v2.0_scaffold138G35260 Striga asiatica HOM05D001448 ORTHO05D005781 3.1e-17 94.0 144 38.2
ECA247G2778 Erigeron canadensis HOM05D001448 ORTHO05D005781 4.5e-16 90.1 196 32.7
PSO782G0756 Papaver somniferum HOM05D001448 ORTHO05D005781 1.4e-14 85.1 236 29.7
FAN27G1373 Fragaria x ananassa HOM05D001448 ORTHO05D005781 5.5e-14 83.2 120 45.0
Os07g0413700 Oryza sativa ssp. japonica HOM05D001448 ORTHO05D005781 1.0e-12 79.0 195 30.8
AUR62024743 Chenopodium quinoa HOM05D001448 ORTHO05D005781 1.3e-12 78.6 143 32.2
Zm00001eb094840 Zea mays HOM05D001448 ORTHO05D005781 1.3e-12 78.6 194 28.9
CDE09G1103 Ceratophyllum demersum HOM05D001448 ORTHO05D005781 6.7e-12 76.3 257 28.4
SEGI_22534 Sequoiadendron giganteum HOM05D001448 ORTHO05D005781 2.2e-07 61.2 225 24.4
Mapoly0154s0015 Marchantia polymorpha HOM05D001448 ORTHO05D005781 2.9e-07 60.8 196 29.1
Mapoly0030s0138 Marchantia polymorpha HOM05D001448 ORTHO05D005781 1.1e-06 58.9 142 35.2


User provided reference genes

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