Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 1.4e-148 529.6 276 100.0
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 3.5e-115 418.7 273 83.5
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 7.3e-73 278.1 278 57.6
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 9.9e-62 241.1 267 54.3
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 3.9e-58 229.2 279 49.1
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 1.1e-57 227.6 271 53.5
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 1.5e-57 227.3 267 52.4
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 1.3e-56 224.2 261 53.3
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 3.7e-56 222.6 257 52.1
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 4.0e-55 219.2 264 51.5
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 5.3e-55 218.8 269 51.3
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 4.9e-53 212.2 270 50.4
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 6.5e-53 211.8 244 52.5
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 2.5e-52 209.9 272 51.5
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 3.2e-52 209.5 258 51.2
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 4.2e-52 209.1 275 49.5
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 1.2e-51 207.6 234 55.1
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 2.1e-51 206.8 275 47.6
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 2.1e-51 206.8 222 55.4
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 3.5e-51 206.1 279 48.7
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 3.9e-50 202.6 281 47.7
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 3.9e-50 202.6 281 47.7
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 3.9e-50 202.6 281 47.7
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 6.7e-50 201.8 285 44.9
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 1.9e-49 200.3 283 44.2
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 1.9e-49 200.3 260 46.9
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 2.5e-49 199.9 235 52.3
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 4.3e-49 199.1 247 49.4
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 5.7e-49 198.7 282 46.8
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 1.6e-48 197.2 159 62.9
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 3.7e-48 196.1 239 48.5
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 3.7e-48 196.1 287 45.3
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 8.2e-48 194.9 236 52.1
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 8.2e-48 194.9 235 50.2
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 8.2e-48 194.9 235 51.5
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 8.2e-48 194.9 274 45.6
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.1e-47 194.5 243 48.1
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 1.8e-47 193.7 266 47.4
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 1.8e-47 193.7 262 47.7
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.4e-47 193.4 230 51.7
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 3.1e-47 193.0 244 44.7
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 4.1e-47 192.6 250 45.6
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 4.1e-47 192.6 281 46.6
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 4.1e-47 192.6 173 59.0
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 5.3e-47 192.2 186 56.5
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 6.9e-47 191.8 277 46.2
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 3.4e-46 189.5 269 45.0
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 7.7e-46 188.3 231 50.2
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 7.7e-46 188.3 260 45.0
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 1.3e-45 187.6 270 45.6
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 1.7e-45 187.2 169 58.0
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 2.9e-45 186.4 269 45.0
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 5.0e-45 185.7 277 45.8
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 8.5e-45 184.9 189 55.0
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 8.5e-45 184.9 153 64.1
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 3.2e-44 183.0 354 36.7
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 5.5e-44 182.2 239 50.2
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 7.2e-44 181.8 270 47.0
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 7.2e-44 181.8 265 43.4
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 1.2e-43 181.0 241 49.0
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 1.2e-43 181.0 136 65.4
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 1.2e-43 181.0 224 49.6
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 4.6e-43 179.1 236 50.4
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 7.9e-43 178.3 248 46.4
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 1.4e-42 177.6 236 47.5
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 6.7e-42 175.3 253 47.0
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 7.4e-41 171.8 227 48.0
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 1.3e-40 171.0 230 44.8
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 3.7e-40 169.5 234 48.7
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 6.3e-40 168.7 235 46.0
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 1.8e-39 167.2 217 47.9
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 9.1e-39 164.9 141 61.0
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 3.4e-38 162.9 229 42.8
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 1.3e-37 161.0 127 63.0
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 1.7e-37 160.6 184 49.5
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 1.7e-37 160.6 135 60.7
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 1.9e-36 157.1 237 40.9
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 2.1e-35 153.7 123 59.3
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 3.9e-34 149.4 156 50.0
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 2.6e-33 146.7 122 59.8
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 4.1e-31 139.4 268 36.2
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 1.5e-30 137.5 117 55.6
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 1.5e-30 137.5 149 49.0
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 1.1e-28 131.3 233 36.9
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 7.2e-28 128.6 147 46.9
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 3.6e-27 126.3 234 36.8
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.1e-25 121.3 196 42.3
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 1.1e-23 114.8 245 34.7
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 1.8e-23 114.0 234 32.9
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 4.1e-23 112.8 159 39.6
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 5.0e-21 105.9 139 48.9
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 1.9e-20 104.0 238 32.4
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 2.1e-19 100.5 114 46.5
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 1.4e-18 97.8 185 34.6
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 7.5e-17 92.0 156 41.0
FAN10G3703 Fragaria x ananassa HOM05D007702 ORTHO05D009736 8.3e-16 88.6 170 38.2
FAN02G1843 Fragaria x ananassa HOM05D007702 ORTHO05D009736 1.0e-13 81.6 154 37.7
FAN07G0391 Fragaria x ananassa HOM05D007702 ORTHO05D009736 7.2e-12 75.5 158 40.5
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 2.8e-08 63.5 67 47.8
AL3G14490 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 2.8e-08 63.5 62 50.0


User provided reference genes

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