Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G116400 Populus trichocarpa HOM05D006528 ORTHO05D008117 1.9e-47 192.2 97 100.0
Sabra07G0094700 Salix brachista HOM05D006528 ORTHO05D008117 1.3e-45 186.0 97 95.9
Atru.chr6.1284 Acer truncatum HOM05D006528 ORTHO05D008117 2.4e-39 165.2 89 89.9
Thecc.02G128200 Theobroma cacao HOM05D006528 ORTHO05D008117 1.6e-38 162.5 90 88.9
Rhsim11G0141900 Rhododendron simsii HOM05D006528 ORTHO05D008117 2.1e-38 162.2 97 85.6
TWI14G0454 Tripterygium wilfordii HOM05D006528 ORTHO05D008117 7.8e-38 160.2 98 84.7
Dinv16007 Davidia involucrata HOM05D006528 ORTHO05D008117 1.0e-37 159.8 97 85.6
MD10G1054900 Malus domestica HOM05D006528 ORTHO05D008117 1.3e-37 159.5 90 87.8
Sed0017031 Sechium edule HOM05D006528 ORTHO05D008117 1.3e-37 159.5 95 83.2
Prupe.8G071000 Prunus persica HOM05D006528 ORTHO05D008117 2.3e-37 158.7 93 87.1
PSO541G2139 Papaver somniferum HOM05D006528 ORTHO05D008117 3.0e-37 158.3 89 88.8
PSO675G1859 Papaver somniferum HOM05D006528 ORTHO05D008117 3.0e-37 158.3 89 88.8
COL.COLO4_32404 Corchorus olitorius HOM05D006528 ORTHO05D008117 3.9e-37 157.9 92 84.8
ClCG10G009640 Citrullus lanatus HOM05D006528 ORTHO05D008117 6.6e-37 157.1 95 84.2
MD05G1048500 Malus domestica HOM05D006528 ORTHO05D008117 6.6e-37 157.1 88 87.5
CiPaw.05G028900 Carya illinoinensis HOM05D006528 ORTHO05D008117 1.5e-36 156.0 96 83.3
vmacro01866 Vaccinium macrocarpon HOM05D006528 ORTHO05D008117 1.5e-36 156.0 97 82.5
Ciclev10029672m.g Citrus clementina HOM05D006528 ORTHO05D008117 2.5e-36 155.2 82 92.7
MELO3C018053.2 Cucumis melo HOM05D006528 ORTHO05D008117 2.5e-36 155.2 95 83.2
Dinv24144 Davidia involucrata HOM05D006528 ORTHO05D008117 3.3e-36 154.8 97 83.5
Migut.B00544 Erythranthe guttata HOM05D006528 ORTHO05D008117 4.3e-36 154.5 86 89.5
Aqoxy6G00830 Aquilegia oxysepala HOM05D006528 ORTHO05D008117 5.6e-36 154.1 94 84.0
Manes.07G041500 Manihot esculenta HOM05D006528 ORTHO05D008117 5.6e-36 154.1 85 89.4
RcHm_v2.0_Chr6g0270691 Rosa chinensis HOM05D006528 ORTHO05D008117 9.6e-36 153.3 87 87.4
Oeu027056.1 Olea europaea HOM05D006528 ORTHO05D008117 1.6e-35 152.5 97 81.4
CSS0011274 Camellia sinensis var. sinensis HOM05D006528 ORTHO05D008117 2.1e-35 152.1 88 86.4
Cc02_g20840 Coffea canephora HOM05D006528 ORTHO05D008117 2.1e-35 152.1 93 84.9
Haze_10502 Corylus avellana HOM05D006528 ORTHO05D008117 2.1e-35 152.1 97 81.4
FvH4_2g11550 Fragaria vesca HOM05D006528 ORTHO05D008117 2.1e-35 152.1 87 86.2
FAN15G1663 Fragaria x ananassa HOM05D006528 ORTHO05D008117 2.1e-35 152.1 87 86.2
FAN24G2600 Fragaria x ananassa HOM05D006528 ORTHO05D008117 2.1e-35 152.1 87 86.2
FAN27G2089 Fragaria x ananassa HOM05D006528 ORTHO05D008117 2.1e-35 152.1 87 86.2
CANSAT21G1972 Cannabis sativa HOM05D006528 ORTHO05D008117 2.8e-35 151.8 97 79.4
Hma1.2p1_1093F.1_g256310 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 2.8e-35 151.8 86 89.5
Actinidia02398 Actinidia chinensis HOM05D006528 ORTHO05D008117 4.8e-35 151.0 97 82.5
Duzib248G1107 Durio zibethinus HOM05D006528 ORTHO05D008117 6.2e-35 150.6 84 88.1
FAN20G2769 Fragaria x ananassa HOM05D006528 ORTHO05D008117 8.1e-35 150.2 87 85.1
DCAR_003600 Daucus carota HOM05D006528 ORTHO05D008117 1.8e-34 149.1 79 91.1
Gohir.D13G049300 Gossypium hirsutum HOM05D006528 ORTHO05D008117 2.4e-34 148.7 89 82.0
CAN.G31.4 Capsicum annuum HOM05D006528 ORTHO05D008117 3.1e-34 148.3 79 93.7
Gohir.A13G050500 Gossypium hirsutum HOM05D006528 ORTHO05D008117 3.1e-34 148.3 92 81.5
Sopen11g019700 Solanum pennellii HOM05D006528 ORTHO05D008117 3.1e-34 148.3 79 93.7
PGSC0003DMG400025320 Solanum tuberosum HOM05D006528 ORTHO05D008117 3.1e-34 148.3 79 93.7
PGSC0003DMG400039300 Solanum tuberosum HOM05D006528 ORTHO05D008117 3.1e-34 148.3 79 93.7
Eucgr.I02615 Eucalyptus grandis HOM05D006528 ORTHO05D008117 4.0e-34 147.9 92 82.6
GSVIVG01012516001 Vitis vinifera HOM05D006528 ORTHO05D008117 5.3e-34 147.5 82 86.6
Peaxi162Scf00152g00928 Petunia axillaris HOM05D006528 ORTHO05D008117 6.9e-34 147.1 92 80.4
Ah.01g007370 Amaranthus hybridus HOM05D006528 ORTHO05D008117 9.0e-34 146.7 95 77.9
HPP92_001604 Vanilla planifolia HOM05D006528 ORTHO05D008117 9.0e-34 146.7 90 81.1
Zm00001eb053530 Zea mays HOM05D006528 ORTHO05D008117 9.0e-34 146.7 89 85.4
Glyma.08G067300 Glycine max HOM05D006528 ORTHO05D008117 1.2e-33 146.4 91 80.2
EL10Ac9g22060 Beta vulgaris HOM05D006528 ORTHO05D008117 1.5e-33 146.0 91 78.0
Glyma.07G182600 Glycine max HOM05D006528 ORTHO05D008117 1.5e-33 146.0 89 82.0
PGR142G2367 Punica granatum HOM05D006528 ORTHO05D008117 1.5e-33 146.0 86 83.7
TAR628G0148 Trochodendron aralioides HOM05D006528 ORTHO05D008117 1.5e-33 146.0 81 87.7
arahy.Tifrunner.gnm1.ann1.AY2SMN Arachis hypogaea HOM05D006528 ORTHO05D008117 2.0e-33 145.6 86 82.6
Lsat_1_v5_gn_7_82720 Lactuca sativa HOM05D006528 ORTHO05D008117 2.0e-33 145.6 86 82.6
Os03g0690000 Oryza sativa ssp. japonica HOM05D006528 ORTHO05D008117 2.0e-33 145.6 89 83.1
arahy.Tifrunner.gnm1.ann1.P7ITSZ Arachis hypogaea HOM05D006528 ORTHO05D008117 2.6e-33 145.2 86 82.6
Medtr2g009660 Medicago truncatula HOM05D006528 ORTHO05D008117 2.6e-33 145.2 86 82.6
Nitab4.5_0001093g0020 Nicotiana tabacum HOM05D006528 ORTHO05D008117 2.6e-33 145.2 92 79.3
Psat1g213920 Pisum sativum HOM05D006528 ORTHO05D008117 2.6e-33 145.2 89 82.0
AUR62027098 Chenopodium quinoa HOM05D006528 ORTHO05D008117 3.4e-33 144.8 92 78.3
AUR62030940 Chenopodium quinoa HOM05D006528 ORTHO05D008117 4.5e-33 144.4 97 76.3
Ca_00167_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 9.9e-33 143.3 78 89.7
Lj9A347T51 Lonicera japonica HOM05D006528 ORTHO05D008117 9.9e-33 143.3 89 84.3
Lalb_Chr09g0326921 Lupinus albus HOM05D006528 ORTHO05D008117 9.9e-33 143.3 86 82.6
Potri.017G042432 Populus trichocarpa HOM05D006528 ORTHO05D008117 9.9e-33 143.3 93 79.6
Hund06469 Selenicereus undatus HOM05D006528 ORTHO05D008117 9.9e-33 143.3 85 82.4
Nn5g29836 Nelumbo nucifera HOM05D006528 ORTHO05D008117 1.3e-32 142.9 88 79.5
Nitab4.5_0000001g0270 Nicotiana tabacum HOM05D006528 ORTHO05D008117 1.3e-32 142.9 89 80.9
Phvul.002G213700 Phaseolus vulgaris HOM05D006528 ORTHO05D008117 1.3e-32 142.9 89 83.1
QL11p025380 Quercus lobata HOM05D006528 ORTHO05D008117 1.3e-32 142.9 122 67.2
Sc05g0005550 Simmondsia chinensis HOM05D006528 ORTHO05D008117 1.3e-32 142.9 93 73.1
Carub.0007s0679 Capsella rubella HOM05D006528 ORTHO05D008117 1.7e-32 142.5 92 75.0
HanXRQChr08g0227171 Helianthus annuus HOM05D006528 ORTHO05D008117 1.7e-32 142.5 89 82.0
Lalb_Chr16g0382981 Lupinus albus HOM05D006528 ORTHO05D008117 1.7e-32 142.5 85 82.4
Sed0022924 Sechium edule HOM05D006528 ORTHO05D008117 2.2e-32 142.1 93 78.5
Lj4g0001130 Lotus japonicus HOM05D006528 ORTHO05D008117 2.9e-32 141.7 89 82.0
Nn1g05616 Nelumbo nucifera HOM05D006528 ORTHO05D008117 2.9e-32 141.7 80 85.0
Lsat_1_v5_gn_5_110181 Lactuca sativa HOM05D006528 ORTHO05D008117 3.8e-32 141.4 81 85.2
THA.LOC104819510 Tarenaya hassleriana HOM05D006528 ORTHO05D008117 3.8e-32 141.4 79 84.8
CARHR241740 Cardamine hirsuta HOM05D006528 ORTHO05D008117 6.4e-32 140.6 92 75.0
ECA234G2655 Erigeron canadensis HOM05D006528 ORTHO05D008117 6.4e-32 140.6 82 81.7
SEGI_09895 Sequoiadendron giganteum HOM05D006528 ORTHO05D008117 6.4e-32 140.6 94 75.5
Ah.01g023880 Amaranthus hybridus HOM05D006528 ORTHO05D008117 8.4e-32 140.2 89 78.7
arahy.Tifrunner.gnm1.ann1.UT9VTR Arachis hypogaea HOM05D006528 ORTHO05D008117 8.4e-32 140.2 82 82.9
BcaC09g52175 Brassica carinata HOM05D006528 ORTHO05D008117 8.4e-32 140.2 90 74.4
C01p05070 Brassica napus HOM05D006528 ORTHO05D008117 8.4e-32 140.2 90 74.4
BolC1t00489H Brassica oleracea HOM05D006528 ORTHO05D008117 8.4e-32 140.2 90 74.4
Ca_18387_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 1.1e-31 139.8 82 84.1
ATR0767G170 Amborella trichopoda HOM05D006528 ORTHO05D008117 1.9e-31 139.0 84 81.0
Cfa004847 Carpinus fangiana HOM05D006528 ORTHO05D008117 1.9e-31 139.0 82 84.1
Aa31sc21G60 Aethionema arabicum HOM05D006528 ORTHO05D008117 3.2e-31 138.3 89 74.2
arahy.Tifrunner.gnm1.ann1.QJC347 Arachis hypogaea HOM05D006528 ORTHO05D008117 5.4e-31 137.5 82 81.7
A01p04680 Brassica napus HOM05D006528 ORTHO05D008117 7.1e-31 137.1 82 79.3
BraA01t00451Z Brassica rapa HOM05D006528 ORTHO05D008117 7.1e-31 137.1 82 79.3
HanXRQChr10g0297761 Helianthus annuus HOM05D006528 ORTHO05D008117 7.1e-31 137.1 81 80.2
Medtr4g093660 Medicago truncatula HOM05D006528 ORTHO05D008117 7.1e-31 137.1 86 79.1
SMO358G0255 Selaginella moellendorffii HOM05D006528 ORTHO05D008117 7.1e-31 137.1 78 84.6
MBI16_g06019_MAGBIO Magnolia biondii HOM05D006528 ORTHO05D008117 1.6e-30 136.0 103 69.9
unitig_0.g617 Utricularia gibba HOM05D006528 ORTHO05D008117 3.5e-30 134.8 79 84.8
Psat7g101760 Pisum sativum HOM05D006528 ORTHO05D008117 4.6e-30 134.4 82 79.3
CDE07G0501 Ceratophyllum demersum HOM05D006528 ORTHO05D008117 6.0e-30 134.0 91 74.7
AT4G33640 Arabidopsis thaliana HOM05D006528 ORTHO05D008117 2.3e-29 132.1 82 76.8
AL7G17860 Arabidopsis lyrata HOM05D006528 ORTHO05D008117 3.0e-29 131.7 79 79.7
Thhalv10026671m.g Eutrema salsugineum HOM05D006528 ORTHO05D008117 3.9e-29 131.3 79 79.7
Sp7g31370 Schrenkiella parvula HOM05D006528 ORTHO05D008117 3.9e-29 131.3 79 79.7
VMungo0251G1582 Vigna mungo HOM05D006528 ORTHO05D008117 1.9e-28 129.0 103 68.9
Mapoly0189s0006 Marchantia polymorpha HOM05D006528 ORTHO05D008117 5.6e-28 127.5 81 76.5
ECA236G0856 Erigeron canadensis HOM05D006528 ORTHO05D008117 1.2e-25 119.8 68 86.8
SalBow6G4989 Salvia bowleyana HOM05D006528 ORTHO05D008117 4.5e-25 117.9 145 50.3
MCO12G136 Micromonas commoda HOM05D006528 ORTHO05D008117 5.8e-25 117.5 78 70.5
SalBow6G1122 Salvia bowleyana HOM05D006528 ORTHO05D008117 7.6e-25 117.1 139 50.4
Pp3c17_23010 Physcomitrium patens HOM05D006528 ORTHO05D008117 1.3e-24 116.3 78 70.5
Solyc11g044230.3 Solanum lycopersicum HOM05D006528 ORTHO05D008117 2.2e-24 115.5 62 91.9
CsaV3_4G014760 Cucumis sativus L. HOM05D006528 ORTHO05D008117 2.4e-23 112.1 70 80.0
Hma1.2p1_0160F.1_g070933 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 3.4e-17 91.7 56 82.1
Hma1.2p1_1174F.1_g263935 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 3.4e-17 91.7 56 82.1
Hma1.2p1_1518F.1_g288560 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 3.4e-17 91.7 56 82.1
PRCOL_00002361 Prasinoderma coloniale HOM05D006528 ORTHO05D008117 5.5e-15 84.3 85 51.8
Actinidia00310 Actinidia chinensis HOM05D006528 ORTHO05D008117 3.9e-13 78.2 59 69.5
Gorai.013G055100 Gossypium raimondii HOM05D006528 ORTHO05D008117 2.0e-09 65.9 43 74.4


User provided reference genes

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