Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G113150 Populus trichocarpa HOM05D009780 ORTHO05D011385 4.3e-13 76.6 37 100.0
Migut.N01092 Erythranthe guttata HOM05D009780 ORTHO05D011385 3.4e-10 67.0 37 86.5
Cc02_g21000 Coffea canephora HOM05D009780 ORTHO05D011385 4.5e-10 66.6 37 83.8
Migut.B00562 Erythranthe guttata HOM05D009780 ORTHO05D011385 1.0e-09 65.5 37 81.1
Glyma.13G258400 Glycine max HOM05D009780 ORTHO05D011385 1.3e-09 65.1 37 73.0
Glyma.15G057000 Glycine max HOM05D009780 ORTHO05D011385 2.2e-09 64.3 37 73.0
Potri.002G104450 Populus trichocarpa HOM05D009780 ORTHO05D011385 3.8e-09 63.5 37 75.7
Gohir.A02G078100 Gossypium hirsutum HOM05D009780 ORTHO05D011385 6.5e-09 62.8 37 75.7
CiPaw.05G030800 Carya illinoinensis HOM05D009780 ORTHO05D011385 1.4e-08 61.6 37 75.7
CsaV3_7G006990 Cucumis sativus L. HOM05D029440 ORTHO05D011385 1.4e-08 61.6 37 75.7
Gohir.D02G085300 Gossypium hirsutum HOM05D009780 ORTHO05D011385 1.4e-08 61.6 37 75.7
Gorai.005G096100 Gossypium raimondii HOM05D009780 ORTHO05D011385 1.4e-08 61.6 37 75.7
Prupe.1G529600 Prunus persica HOM05D009780 ORTHO05D011385 1.9e-08 61.2 37 73.0
Haze_10541 Corylus avellana HOM05D002856 ORTHO05D003246 5.5e-08 59.7 36 77.8
Potri.017G047750 Populus trichocarpa HOM05D009780 ORTHO05D011385 2.1e-07 57.8 32 87.5
ClCG11G014510 Citrullus lanatus HOM05D009780 ORTHO05D011385 3.6e-07 57.0 37 67.6
RhsimUnG0008500 Rhododendron simsii HOM05D002856 ORTHO05D003246 3.6e-07 57.0 31 80.6
Cc10_g15740 Coffea canephora HOM05D009780 ORTHO05D011385 7.9e-07 55.8 37 70.3
Dinv15991 Davidia involucrata HOM05D002856 ORTHO05D003246 7.9e-07 55.8 32 75.0
Dinv24158 Davidia involucrata HOM05D002856 ORTHO05D003246 1.4e-06 55.1 32 71.9
MBI02_g04226_MAGBIO Magnolia biondii HOM05D002856 ORTHO05D003246 1.8e-06 54.7 32 84.4
Glyma.06G093800 Glycine max HOM05D009780 ORTHO05D011385 2.3e-06 54.3 37 64.9
Manes.07G036700 Manihot esculenta HOM05D002856 ORTHO05D003246 2.3e-06 54.3 32 78.1
Phvul.009G144000 Phaseolus vulgaris HOM05D009780 ORTHO05D011385 3.0e-06 53.9 37 64.9
Carub.0002s0650 Capsella rubella HOM05D009780 ORTHO05D011385 3.9e-06 53.5 37 62.2
Glyma.02G213300 Glycine max HOM05D009780 ORTHO05D011385 3.9e-06 53.5 37 64.9
Gohir.A05G265000 Gossypium hirsutum HOM05D009780 ORTHO05D011385 3.9e-06 53.5 37 67.6
Gohir.D05G267300 Gossypium hirsutum HOM05D009780 ORTHO05D011385 3.9e-06 53.5 37 67.6
BraA09t37480Z Brassica rapa HOM05D031240 ORTHO05D011385 6.7e-06 52.8 37 62.2
Medtr3g100550 Medicago truncatula HOM05D002856 ORTHO05D003246 6.7e-06 52.8 35 65.7
GSVIVG01009154001 Vitis vinifera HOM05D002856 ORTHO05D003246 6.7e-06 52.8 33 75.8


User provided reference genes

Program Settings