Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G100500 Populus trichocarpa HOM05D003290 ORTHO05D003866 1.0e-108 396.7 194 100.0
Potri.010G100900 Populus trichocarpa HOM05D003290 ORTHO05D003866 8.6e-44 181.0 101 91.1
Potri.008G140700 Populus trichocarpa HOM05D003290 ORTHO05D003866 2.4e-38 162.9 101 81.2
Sabra08G0106800 Salix brachista HOM05D003290 ORTHO05D003866 1.1e-33 147.5 103 74.8
Dinv07020 Davidia involucrata HOM05D003290 ORTHO05D003866 1.4e-25 120.6 107 62.6
Actinidia12429 Actinidia chinensis HOM05D003290 ORTHO05D003866 2.0e-24 116.7 101 63.4
Haze_10794 Corylus avellana HOM05D003290 ORTHO05D003866 5.8e-24 115.2 103 64.1
Cfa015081 Carpinus fangiana HOM05D003290 ORTHO05D003866 7.6e-24 114.8 99 66.7
Atru.chr11.983 Acer truncatum HOM05D003290 ORTHO05D003866 9.9e-24 114.4 103 61.2
Manes.15G139900 Manihot esculenta HOM05D003290 ORTHO05D003866 2.2e-23 113.2 103 64.1
Prupe.1G339200 Prunus persica HOM05D003290 ORTHO05D003866 2.9e-23 112.8 103 59.2
Ciclev10015265m.g Citrus clementina HOM05D003290 ORTHO05D003866 3.8e-23 112.5 103 63.1
MELO3C005228.2 Cucumis melo HOM05D003290 ORTHO05D003866 4.9e-23 112.1 101 55.4
arahy.Tifrunner.gnm1.ann1.4ZG746 Arachis hypogaea HOM05D003290 ORTHO05D003866 8.4e-23 111.3 104 60.6
arahy.Tifrunner.gnm1.ann1.GST19D Arachis hypogaea HOM05D003290 ORTHO05D003866 8.4e-23 111.3 104 60.6
PGR142G0945 Punica granatum HOM05D003290 ORTHO05D003866 8.4e-23 111.3 103 59.2
FAN22G1284 Fragaria x ananassa HOM05D003290 ORTHO05D003866 1.4e-22 110.5 101 59.4
Lalb_Chr13g0293001 Lupinus albus HOM05D003290 ORTHO05D003866 1.4e-22 110.5 103 59.2
arahy.Tifrunner.gnm1.ann1.P8F85A Arachis hypogaea HOM05D003290 ORTHO05D003866 1.9e-22 110.2 104 59.6
CANSAT78G1043 Cannabis sativa HOM05D003290 ORTHO05D003866 2.4e-22 109.8 113 56.6
MD13G1014100 Malus domestica HOM05D003290 ORTHO05D003866 2.4e-22 109.8 104 59.6
CiPaw.05G160100 Carya illinoinensis HOM05D003290 ORTHO05D003866 3.2e-22 109.4 101 61.4
TAR629G0420 Trochodendron aralioides HOM05D003290 ORTHO05D003866 3.2e-22 109.4 102 60.8
GSVIVG01011573001 Vitis vinifera HOM05D003290 ORTHO05D003866 4.1e-22 109.0 125 52.0
CsaV3_5G017250 Cucumis sativus L. HOM05D003290 ORTHO05D003866 5.4e-22 108.6 101 53.5
Eucgr.G02062 Eucalyptus grandis HOM05D003290 ORTHO05D003866 5.4e-22 108.6 102 56.9
Oeu005355.3 Olea europaea HOM05D003290 ORTHO05D005991 5.4e-22 108.6 103 58.3
ClCG01G006860 Citrullus lanatus HOM05D003290 ORTHO05D003866 7.1e-22 108.2 101 54.5
Sed0007344 Sechium edule HOM05D003290 ORTHO05D003866 9.2e-22 107.8 101 53.5
Lj4g0019755 Lotus japonicus HOM05D003290 ORTHO05D003866 2.1e-21 106.7 113 54.9
Cc11_g05260 Coffea canephora HOM05D003290 ORTHO05D003866 3.5e-21 105.9 120 55.0
Cpa.g.sc2.70 Carica papaya HOM05D003290 ORTHO05D003866 4.6e-21 105.5 102 59.8
Rhsim09G0082800 Rhododendron simsii HOM05D003290 ORTHO05D003866 4.6e-21 105.5 112 54.5
FvH4_4g35880 Fragaria vesca HOM05D003290 ORTHO05D003866 1.0e-20 104.4 101 56.4
FAN12G1356 Fragaria x ananassa HOM05D003290 ORTHO05D003866 1.0e-20 104.4 101 56.4
Glyma.08G092000 Glycine max HOM05D003290 ORTHO05D003866 1.3e-20 104.0 104 59.6
RcHm_v2.0_Chr4g0445491 Rosa chinensis HOM05D003290 ORTHO05D003866 1.3e-20 104.0 114 53.5
QL03p039662 Quercus lobata HOM05D003290 ORTHO05D003866 2.3e-20 103.2 101 59.4
Solyc01g005020.3 Solanum lycopersicum HOM05D003290 ORTHO05D003866 3.0e-20 102.8 103 55.3
Sopen01g001090 Solanum pennellii HOM05D003290 ORTHO05D003866 3.0e-20 102.8 103 55.3
CiPaw.05G159900 Carya illinoinensis HOM05D003290 ORTHO05D003866 8.6e-20 101.3 101 56.4
Ca_18198_v3 Cicer arietinum L. HOM05D003290 ORTHO05D003866 1.1e-19 100.9 103 55.3
DCAR_030317 Daucus carota HOM05D003290 ORTHO05D003866 1.1e-19 100.9 112 49.1
Nitab4.5_0001529g0040 Nicotiana tabacum HOM05D003290 ORTHO05D003866 1.1e-19 100.9 103 54.4
Manes.17G091100 Manihot esculenta HOM05D003290 ORTHO05D003866 1.5e-19 100.5 103 55.3
Peaxi162Scf00349g00111 Petunia axillaris HOM05D003290 ORTHO05D003866 1.5e-19 100.5 103 55.3
TWI74G0523 Tripterygium wilfordii HOM05D003290 ORTHO05D003866 1.5e-19 100.5 100 59.0
Nitab4.5_0007122g0010 Nicotiana tabacum HOM05D003290 ORTHO05D003866 1.9e-19 100.1 103 54.4
Aqoxy3G04046 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 2.5e-19 99.8 107 57.0
TPR.G11847 Trifolium pratense HOM05D003290 ORTHO05D003866 4.3e-19 99.0 103 57.3
Psat7g085560 Pisum sativum HOM05D003290 ORTHO05D003866 5.6e-19 98.6 103 54.4
PGSC0003DMG400022786 Solanum tuberosum HOM05D003290 ORTHO05D003866 5.6e-19 98.6 100 55.0
vmacro10756 Vaccinium macrocarpon HOM05D003290 ORTHO05D003866 2.1e-18 96.7 115 50.4
VMungo0251G2069 Vigna mungo HOM05D003290 ORTHO05D003866 2.8e-18 96.3 103 53.4
CAN.G282.93 Capsicum annuum HOM05D003290 ORTHO05D003866 8.1e-18 94.7 103 52.4
Thecc.02G301400 Theobroma cacao HOM05D003290 ORTHO05D003866 1.4e-17 94.0 111 53.2
CAN.G282.94 Capsicum annuum HOM05D003290 ORTHO05D003866 2.4e-17 93.2 103 52.4
Sc03g0005960 Simmondsia chinensis HOM05D003290 ORTHO05D003866 2.4e-17 93.2 101 52.5
THA.LOC104805106 Tarenaya hassleriana HOM05D003290 ORTHO05D003866 4.0e-17 92.4 112 50.9
Gohir.A03G113800 Gossypium hirsutum HOM05D003290 ORTHO05D003866 5.2e-17 92.0 110 53.6
Phvul.002G185150 Phaseolus vulgaris HOM05D003290 ORTHO05D003866 6.9e-17 91.7 103 52.4
CSS0011262 Camellia sinensis var. sinensis HOM05D003290 ORTHO05D003866 8.9e-17 91.3 102 50.0
Gohir.D02G138100 Gossypium hirsutum HOM05D003290 ORTHO05D003866 1.2e-16 90.9 110 52.7
Gorai.005G154600 Gossypium raimondii HOM05D003290 ORTHO05D003866 1.2e-16 90.9 110 52.7
Hma1.2p1_0197F.1_g085170 Hydrangea macrophylla HOM05D003290 ORTHO05D003866 1.2e-16 90.9 103 56.3
Nn4g24593 Nelumbo nucifera HOM05D003290 ORTHO05D003866 2.0e-16 90.1 105 47.6
Ah.03g147350 Amaranthus hybridus HOM05D003290 ORTHO05D003866 3.4e-16 89.4 100 47.0
MBI13_g17879_MAGBIO Magnolia biondii HOM05D003290 ORTHO05D003866 9.9e-16 87.8 104 51.0
Migut.E00570 Erythranthe guttata HOM05D003290 ORTHO05D003866 2.2e-15 86.7 101 53.5
TWI56G1413 Tripterygium wilfordii HOM05D003290 ORTHO05D003866 2.2e-15 86.7 101 50.5
CDE06G1581 Ceratophyllum demersum HOM05D003290 ORTHO05D003866 4.9e-15 85.5 125 44.0
EL10Ac6g15381 Beta vulgaris HOM05D003290 ORTHO05D003866 6.4e-15 85.1 100 47.0
COL.COLO4_27555 Corchorus olitorius HOM05D003290 ORTHO05D003866 8.4e-15 84.7 111 47.7
CARHR144580 Cardamine hirsuta HOM05D003290 ORTHO05D003866 1.4e-14 84.0 113 46.0
PSO017G1263 Papaver somniferum HOM05D003290 ORTHO05D003866 1.4e-14 84.0 88 46.6
ECA234G2339 Erigeron canadensis HOM05D003290 ORTHO05D003866 3.2e-14 82.8 99 48.5
ATR0598G076 Amborella trichopoda HOM05D003290 ORTHO05D003866 5.4e-14 82.0 126 45.2
Lj6C728G5 Lonicera japonica HOM05D003290 ORTHO05D003866 9.3e-14 81.3 103 47.6
AT2G01980 Arabidopsis thaliana HOM05D003290 ORTHO05D003866 1.6e-13 80.5 113 46.0
SGA_v2.0_scaffold348G49593 Striga asiatica HOM05D003290 ORTHO05D003866 1.6e-13 80.5 103 47.6
AL5G11170 Arabidopsis lyrata HOM05D003290 ORTHO05D003866 2.7e-13 79.7 114 46.5
AUR62003491 Chenopodium quinoa HOM05D003290 ORTHO05D003866 7.8e-13 78.2 103 44.7
Duzib268G0109 Durio zibethinus HOM05D003290 ORTHO05D003866 7.8e-13 78.2 138 42.0
Thhalv10003547m.g Eutrema salsugineum HOM05D003290 ORTHO05D003866 1.3e-12 77.4 106 46.2
Sp2g13410 Schrenkiella parvula HOM05D003290 ORTHO05D003866 1.7e-12 77.0 107 44.9
BcaB07g30722 Brassica carinata HOM05D003290 ORTHO05D003866 3.9e-12 75.9 130 42.3
AUR62017800 Chenopodium quinoa HOM05D003290 ORTHO05D003866 3.9e-12 75.9 108 40.7
Aa31LG2G7940 Aethionema arabicum HOM05D003290 ORTHO05D003866 1.1e-11 74.3 106 43.4
BraA09t37969Z Brassica rapa HOM05D003290 ORTHO05D003866 2.5e-11 73.2 106 44.3
Lj4g0008630 Lotus japonicus HOM05D003290 ORTHO05D003866 4.3e-11 72.4 100 44.0
BolC9t55917H Brassica oleracea HOM05D003290 ORTHO05D003866 7.3e-11 71.6 106 43.4
Carub.0005s0099 Capsella rubella HOM05D003290 ORTHO05D003866 9.6e-11 71.2 113 42.5
BcaC04g21541 Brassica carinata HOM05D003290 ORTHO05D003866 1.3e-10 70.9 106 43.4
A09p23700 Brassica napus HOM05D003290 ORTHO05D003866 1.3e-10 70.9 106 43.4
C09p30540 Brassica napus HOM05D003290 ORTHO05D003866 1.3e-10 70.9 106 43.4
Aqoxy4G00109 Aquilegia oxysepala HOM05D003290 ORTHO05D003866 1.6e-10 70.5 104 45.2
HanXRQChr15g0469331 Helianthus annuus HOM05D003290 ORTHO05D003866 2.8e-10 69.7 102 42.2
Lsat_1_v5_gn_5_35481 Lactuca sativa HOM05D003290 ORTHO05D003866 3.6e-10 69.3 105 44.8
MSTRG.2101 Avicennia marina HOM05D003290 ORTHO05D003866 4.8e-10 68.9 90 45.6
DCAR_030318 Daucus carota HOM05D003290 ORTHO05D003866 4.8e-10 68.9 101 39.6
unitig_699.g19544 Utricularia gibba HOM05D003290 ORTHO05D003866 2.4e-09 66.6 104 40.4
unitig_27.g25301 Utricularia gibba HOM05D003290 ORTHO05D003866 5.3e-09 65.5 104 36.5
Zm00001eb033240 Zea mays HOM05D003290 ORTHO05D003866 5.3e-09 65.5 120 36.7
HPP92_016411 Vanilla planifolia HOM05D003290 ORTHO05D003866 6.9e-09 65.1 113 38.1
FAN07G0883 Fragaria x ananassa HOM05D003290 ORTHO05D003866 1.2e-08 64.3 99 44.4
PSO170G2638 Papaver somniferum HOM05D003290 ORTHO05D003866 1.2e-08 64.3 102 38.2
PSO170G6380 Papaver somniferum HOM05D003290 ORTHO05D003866 3.4e-08 62.8 79 45.6
SEGI_28338 Sequoiadendron giganteum HOM05D003290 ORTHO05D003866 8.4e-07 58.2 108 36.1
PSO729G0139 Papaver somniferum HOM05D003290 ORTHO05D003866 1.1e-06 57.8 74 47.3
CAN.G282.92 Capsicum annuum HOM05D003290 ORTHO05D003866 1.4e-06 57.4 79 45.6


User provided reference genes

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