Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 9.9e-46 186.4 94 100.0
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 3.8e-29 131.3 76 84.2
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 6.7e-26 120.6 76 80.3
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 1.8e-23 112.5 76 73.7
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.2e-22 109.8 76 72.4
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 4.9e-21 104.4 83 67.5
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 1.4e-20 102.8 76 69.7
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.9e-20 102.4 77 71.4
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 1.6e-19 99.4 75 66.7
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 3.5e-19 98.2 77 62.3
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 4.6e-19 97.8 75 64.0
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 1.0e-18 96.7 81 65.4
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 1.0e-18 96.7 81 64.2
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 1.3e-18 96.3 80 63.8
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 1.3e-18 96.3 79 65.8
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 2.3e-18 95.5 80 61.2
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 3.0e-18 95.1 79 65.8
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 3.9e-18 94.7 79 60.8
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 5.1e-18 94.4 77 62.3
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 1.1e-17 93.2 79 63.3
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 1.1e-17 93.2 79 62.0
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 1.9e-17 92.4 77 63.6
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 1.9e-17 92.4 80 62.5
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.9e-17 92.4 79 64.6
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.9e-17 92.4 79 64.6
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 1.9e-17 92.4 79 64.6
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 1.9e-17 92.4 78 64.1
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 2.5e-17 92.0 80 62.5
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 2.5e-17 92.0 77 63.6
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 4.3e-17 91.3 76 63.2
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 4.3e-17 91.3 74 64.9
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 5.7e-17 90.9 79 63.3
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 5.7e-17 90.9 76 61.8
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 5.7e-17 90.9 76 60.5
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 7.4e-17 90.5 75 61.3
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 7.4e-17 90.5 76 57.9
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 9.7e-17 90.1 79 60.8
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 9.7e-17 90.1 76 61.8
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 1.6e-16 89.4 79 58.2
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 2.2e-16 89.0 79 57.0
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 2.8e-16 88.6 78 59.0
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 3.7e-16 88.2 78 59.0
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 4.8e-16 87.8 77 57.1
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 6.3e-16 87.4 78 60.3
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 1.1e-15 86.7 84 59.5
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.4e-15 86.3 82 56.1
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 2.4e-15 85.5 82 61.0
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 3.1e-15 85.1 81 58.0
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 4.1e-15 84.7 82 54.9
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 4.1e-15 84.7 81 56.8
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 6.9e-15 84.0 66 60.6
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 6.9e-15 84.0 75 58.7
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 9.0e-15 83.6 78 51.3
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 9.0e-15 83.6 79 58.2
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 9.0e-15 83.6 76 59.2
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 1.2e-14 83.2 78 59.0
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 1.2e-14 83.2 77 55.8
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 1.5e-14 82.8 78 56.4
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 1.5e-14 82.8 79 57.0
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 2.0e-14 82.4 78 55.1
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 2.0e-14 82.4 81 58.0
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 2.0e-14 82.4 77 54.5
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 2.0e-14 82.4 77 54.5
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 2.6e-14 82.0 80 57.5
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 2.6e-14 82.0 81 61.7
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 2.6e-14 82.0 81 61.7
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.4e-14 81.6 80 57.5
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 4.5e-14 81.3 77 54.5
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.0e-13 80.1 77 57.1
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 1.0e-13 80.1 76 53.9
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 2.9e-13 78.6 78 53.8
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 3.8e-13 78.2 79 55.7
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 3.8e-13 78.2 79 55.7
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 3.8e-13 78.2 78 57.7
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 5.0e-13 77.8 82 51.2
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 1.1e-12 76.6 77 53.2
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 1.4e-12 76.3 74 54.1
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 2.5e-12 75.5 73 57.5
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 2.5e-12 75.5 73 52.1
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 2.5e-12 75.5 73 52.1
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 3.2e-12 75.1 73 52.1
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 3.2e-12 75.1 78 48.7
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 4.2e-12 74.7 71 50.7
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 1.2e-11 73.2 76 51.3
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 2.1e-11 72.4 82 52.4
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 3.6e-11 71.6 66 53.0
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 7.9e-11 70.5 127 39.4
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.0e-10 70.1 127 39.4
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 2.3e-10 68.9 81 45.7
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.9e-10 68.2 79 50.6
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 5.1e-10 67.8 76 47.4
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.1e-09 66.6 75 52.0
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 4.3e-09 64.7 74 50.0
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 2.2e-08 62.4 72 48.6
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 2.8e-08 62.0 73 46.6
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 3.7e-08 61.6 70 52.9
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 8.2e-08 60.5 61 50.8
DCAR_011494 Daucus carota HOM05D006522 ORTHO05D008183 2.6e-06 55.5 64 51.6


User provided reference genes

Program Settings