Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 1.8e-117 426.0 223 100.0
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 5.5e-103 377.9 260 80.8
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 7.4e-100 367.5 218 85.3
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 9.7e-100 367.1 218 85.3
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 6.3e-99 364.4 219 85.4
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 4.1e-98 361.7 219 84.5
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 4.1e-98 361.7 219 83.6
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 3.5e-97 358.6 219 84.0
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 2.2e-96 355.9 219 82.6
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 5.0e-96 354.8 223 81.2
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 8.5e-96 354.0 207 87.0
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 1.5e-95 353.2 223 81.6
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.5e-95 352.4 219 82.2
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.2e-94 350.1 221 79.2
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 1.2e-94 350.1 219 81.7
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 1.6e-94 349.7 225 80.4
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 2.7e-94 349.0 222 78.8
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 4.7e-94 348.2 219 84.5
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 1.4e-93 346.7 224 78.1
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 1.8e-93 346.3 214 81.8
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 2.3e-93 345.9 219 80.8
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 2.3e-93 345.9 219 80.8
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 3.0e-93 345.5 213 83.1
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 8.8e-93 344.0 225 80.0
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 1.5e-92 343.2 219 80.4
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 2.0e-92 342.8 219 79.5
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 4.4e-92 341.7 215 80.5
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 4.4e-92 341.7 215 81.4
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 7.5e-92 340.9 216 78.7
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 7.5e-92 340.9 236 75.8
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 1.7e-91 339.7 218 77.5
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 1.7e-91 339.7 223 78.9
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 1.7e-91 339.7 220 78.2
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 2.2e-91 339.3 220 78.6
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 3.7e-91 338.6 214 79.0
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 4.8e-91 338.2 219 80.4
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 8.2e-91 337.4 216 78.2
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 8.2e-91 337.4 221 77.4
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 1.1e-90 337.0 220 80.0
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 1.1e-90 337.0 220 80.0
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 1.1e-90 337.0 212 80.2
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.1e-90 337.0 220 77.7
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 1.1e-90 337.0 220 79.1
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 1.8e-90 336.3 221 77.8
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 3.1e-90 335.5 220 79.5
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 5.3e-90 334.7 218 78.9
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 5.3e-90 334.7 217 77.4
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 7.0e-90 334.3 219 77.2
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 9.1e-90 334.0 219 78.1
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 9.1e-90 334.0 220 77.7
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 3.5e-89 332.0 222 77.9
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 7.7e-89 330.9 225 76.4
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 1.7e-88 329.7 218 77.5
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 2.9e-88 328.9 220 78.2
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 2.9e-88 328.9 220 78.2
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 5.0e-88 328.2 218 75.7
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 5.5e-87 324.7 218 76.6
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 9.4e-87 323.9 218 76.6
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 1.6e-86 323.2 223 74.9
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.6e-86 323.2 244 70.1
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 2.7e-86 322.4 218 76.1
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 3.6e-86 322.0 218 76.1
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 4.7e-86 321.6 223 77.6
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 1.8e-85 319.7 221 77.8
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 1.8e-85 319.7 216 75.9
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.3e-85 319.3 212 76.9
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 3.0e-85 318.9 215 76.3
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 3.0e-85 318.9 218 75.2
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.2e-84 317.0 221 76.0
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 2.6e-84 315.8 219 79.9
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 3.4e-84 315.5 220 76.4
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 4.4e-84 315.1 219 73.1
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 2.2e-83 312.8 220 75.9
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 5.4e-82 308.1 215 78.1
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 4.5e-81 305.1 221 72.4
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 1.5e-79 300.1 246 66.7
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 2.5e-79 299.3 202 77.7
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 3.2e-79 298.9 199 77.9
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 7.2e-79 297.7 193 78.2
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 1.6e-78 296.6 218 69.3
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 3.6e-78 295.4 218 69.3
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 6.1e-78 294.7 189 78.8
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 3.0e-77 292.4 219 71.2
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.3e-75 287.0 211 72.0
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 2.8e-75 285.8 213 69.0
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 5.4e-74 281.6 254 65.4
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 1.6e-73 280.0 220 68.6
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 3.5e-73 278.9 228 68.4
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 1.0e-72 277.3 241 63.9
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 6.6e-72 274.6 178 77.5
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.1e-71 273.9 214 67.8
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 2.1e-70 269.6 220 65.0
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 8.0e-70 267.7 225 64.4
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 2.2e-67 259.6 205 67.3
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 6.6e-64 248.1 153 85.0
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 6.2e-62 241.5 217 59.0
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 2.0e-60 236.5 203 67.5
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 5.8e-60 235.0 154 76.0
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.3e-59 233.8 264 56.8
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 6.0e-57 224.9 160 71.9
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 3.9e-56 222.2 208 60.1
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 3.9e-56 222.2 218 53.7
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 1.2e-54 217.2 225 54.2
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 1.7e-48 196.8 219 50.7
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 3.9e-48 195.7 313 41.5
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 1.2e-46 190.7 143 66.4
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 3.6e-46 189.1 199 58.8
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 2.4e-42 176.4 218 46.8
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 4.7e-38 162.2 150 53.3
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 5.8e-36 155.2 85 92.9
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 1.1e-34 151.0 382 31.9
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.9e-34 150.2 105 77.1
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 1.4e-26 124.0 84 69.0
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 2.3e-24 116.7 70 78.6
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 6.2e-22 108.6 139 48.9
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 2.6e-20 103.2 98 55.1
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 4.9e-19 99.0 51 90.2
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 1.9e-18 97.1 60 85.0
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 3.2e-18 96.3 71 78.9
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 1.9e-15 87.0 60 81.7
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.4e-13 80.1 58 74.1
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 5.3e-13 79.0 193 33.2
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 7.6e-12 75.1 51 78.4
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.7e-11 73.9 52 76.9
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.9e-10 70.5 85 45.9
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 5.5e-10 68.9 53 67.9
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.6e-09 67.4 41 78.0


User provided reference genes

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