Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 2.1e-149 532.3 267 100.0
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 5.7e-139 497.7 267 92.5
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 8.6e-103 377.5 268 72.8
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 6.2e-93 344.7 261 68.6
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 3.1e-92 342.4 271 65.3
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 4.0e-92 342.0 207 79.7
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.5e-91 340.1 233 72.5
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 2.0e-91 339.7 212 79.7
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 5.6e-86 321.6 217 71.9
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 7.3e-86 321.2 220 70.0
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 2.8e-85 319.3 218 70.6
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 6.8e-84 314.7 220 69.1
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 8.9e-84 314.3 252 61.5
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.5e-83 313.5 207 71.0
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 4.4e-83 312.0 249 62.2
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 1.3e-82 310.5 207 75.4
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 1.3e-82 310.5 207 75.4
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 1.7e-82 310.1 269 57.2
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 6.4e-82 308.1 255 62.0
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 6.4e-82 308.1 269 59.1
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 6.4e-82 308.1 264 58.7
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 8.4e-82 307.8 207 70.0
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 1.1e-81 307.4 254 60.6
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 1.1e-81 307.4 264 58.7
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 1.1e-81 307.4 241 62.7
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 1.4e-81 307.0 206 69.4
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 2.4e-81 306.2 263 60.8
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 3.2e-81 305.8 232 64.2
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 4.2e-81 305.4 209 71.3
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 5.4e-81 305.1 209 69.4
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 7.1e-81 304.7 209 68.4
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 9.3e-81 304.3 247 63.2
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 1.6e-80 303.5 209 70.3
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.6e-80 303.5 232 65.5
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 2.1e-80 303.1 209 69.9
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 2.7e-80 302.8 232 63.8
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 3.5e-80 302.4 209 69.9
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 3.5e-80 302.4 207 68.1
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 3.5e-80 302.4 247 62.8
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 7.8e-80 301.2 233 63.1
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 7.8e-80 301.2 205 71.2
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 1.0e-79 300.8 261 57.5
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 1.0e-79 300.8 207 72.0
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 3.0e-79 299.3 211 65.4
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 5.1e-79 298.5 218 67.0
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 8.7e-79 297.7 194 74.7
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 1.1e-78 297.4 207 67.1
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 1.5e-78 297.0 239 61.1
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.9e-78 296.6 201 70.1
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.9e-78 296.6 225 64.9
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 7.3e-78 294.7 218 66.1
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 1.3e-77 293.9 277 56.3
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 1.6e-77 293.5 243 60.5
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 1.6e-77 293.5 201 69.7
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 2.8e-77 292.7 254 59.1
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 3.6e-77 292.4 236 64.4
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.1e-76 290.8 264 56.4
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 1.1e-76 290.8 218 65.6
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 2.4e-76 289.7 223 61.9
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 3.1e-76 289.3 218 65.1
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 4.0e-76 288.9 208 66.8
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 9.0e-76 287.7 212 64.6
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 4.4e-75 285.4 251 58.2
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 9.9e-75 284.3 263 56.7
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 4.9e-74 282.0 253 55.7
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 1.9e-73 280.0 209 69.4
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 7.1e-73 278.1 227 57.3
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 2.1e-72 276.6 206 63.1
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 6.6e-71 271.6 181 72.4
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 1.8e-68 263.5 232 61.6
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.2e-67 260.8 181 68.0
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 2.2e-66 256.5 228 57.0
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 2.9e-66 256.1 207 59.9
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 4.9e-66 255.4 240 57.9
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 4.6e-64 248.8 226 58.0
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 4.6e-64 248.8 196 62.2
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 1.0e-63 247.7 186 64.5
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 2.3e-63 246.5 166 71.1
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 1.9e-62 243.4 232 53.9
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 1.6e-61 240.4 230 53.9
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 2.9e-58 229.6 220 55.5
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 6.5e-58 228.4 186 65.1
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 4.3e-54 215.7 199 51.3
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 1.4e-52 210.7 273 43.6
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.5e-51 207.2 140 70.7
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 1.0e-50 204.5 205 50.2
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 1.7e-50 203.8 218 48.2
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.9e-49 200.3 212 45.8
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 5.1e-47 192.2 185 50.3
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 1.3e-45 187.6 140 64.3
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 3.3e-38 162.9 124 61.3
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.7e-37 160.6 154 57.1
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 8.8e-31 138.3 200 38.0
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 2.0e-30 137.1 98 69.4
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 2.8e-29 133.3 167 43.1
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 5.9e-27 125.6 104 56.7
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 7.7e-27 125.2 145 44.1
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 9.4e-25 118.2 88 59.1
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 8.0e-24 115.2 208 38.9
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.0e-22 110.5 102 55.9
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 1.6e-19 100.9 80 57.5
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 2.3e-15 87.0 196 29.6
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.3e-10 71.2 77 45.5
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 1.7e-10 70.9 40 77.5
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 8.5e-10 68.6 56 58.9
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 2.7e-08 63.5 41 61.0
QL04p088276 Quercus lobata HOM05D037085 ORTHO05D009162 1.2e-06 58.2 36 69.4


User provided reference genes

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