Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G061661 Populus trichocarpa HOM05D008204 ORTHO05D010378 6.9e-45 183.7 101 100.0
Potri.007G062622 Populus trichocarpa HOM05D008204 ORTHO05D010378 6.9e-45 183.7 101 100.0
CANSAT16G0035 Cannabis sativa HOM05D008204 ORTHO05D010378 2.1e-41 172.2 101 96.0
Sed0011989 Sechium edule HOM05D008204 ORTHO05D010378 2.1e-41 172.2 101 96.0
Sed0024014 Sechium edule HOM05D008204 ORTHO05D010378 2.1e-41 172.2 101 96.0
BraSC48t46233Z Brassica rapa HOM05D008204 ORTHO05D010378 2.8e-38 161.8 101 91.1
CARHR283010 Cardamine hirsuta HOM05D008204 ORTHO05D010378 2.8e-38 161.8 101 91.1
Thhalv10023053m.g Eutrema salsugineum HOM05D008204 ORTHO05D010378 8.2e-38 160.2 101 90.1
C01p34800 Brassica napus HOM05D008204 ORTHO05D010378 2.4e-37 158.7 101 89.1
BolC1t03448H Brassica oleracea HOM05D008204 ORTHO05D010378 2.4e-37 158.7 101 89.1
ATMG00650 Arabidopsis thaliana HOM05D008204 ORTHO05D010378 4.1e-37 157.9 101 90.1
TPR.G39971 Trifolium pratense HOM05D008204 ORTHO05D010378 2.0e-36 155.6 100 90.0
CAN.G2446.2 Capsicum annuum HOM05D008204 ORTHO05D010378 2.6e-36 155.2 101 89.1
CAN.G2792.2 Capsicum annuum HOM05D008204 ORTHO05D010378 2.6e-36 155.2 101 89.1
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 7.6e-36 153.7 85 98.8
BraSC48t46321Z Brassica rapa HOM05D008204 ORTHO05D010378 1.9e-31 139.0 88 89.8
Lalb_Chr00c21g0405851 Lupinus albus HOM05D008204 ORTHO05D010378 1.3e-30 136.3 91 90.1
Lalb_Chr00c24g0407001 Lupinus albus HOM05D008204 ORTHO05D010378 1.3e-30 136.3 91 90.1
RcHm_v2.0_MTg0498341 Rosa chinensis HOM05D008204 ORTHO05D010378 1.3e-30 136.3 91 90.1
Glyma.17G186100 Glycine max HOM05D008204 ORTHO05D010378 1.6e-30 136.0 91 89.0
Nn1g09977 Nelumbo nucifera HOM05D008204 ORTHO05D010378 1.6e-30 136.0 90 90.0
Nn1g10041 Nelumbo nucifera HOM05D008204 ORTHO05D010378 1.6e-30 136.0 90 90.0
DCAR_032454 Daucus carota HOM05D008204 ORTHO05D010378 6.3e-30 134.0 91 89.0
HanXRQChr16g0504421 Helianthus annuus HOM05D008204 ORTHO05D010378 6.3e-30 134.0 91 89.0
HanXRQMTg0579141 Helianthus annuus HOM05D008204 ORTHO05D010378 6.3e-30 134.0 91 89.0
Aqoxy1G02968 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 1.4e-29 132.9 88 88.6
Aqoxy23s009 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 1.4e-29 132.9 88 88.6
arahy.Tifrunner.gnm1.ann1.13YUNC Arachis hypogaea HOM05D008204 ORTHO05D010378 4.1e-29 131.3 85 89.4
arahy.Tifrunner.gnm1.ann1.CN6S56 Arachis hypogaea HOM05D008204 ORTHO05D010378 4.1e-29 131.3 85 89.4
arahy.Tifrunner.gnm1.ann1.TNUC9A Arachis hypogaea HOM05D008204 ORTHO05D010378 4.1e-29 131.3 85 89.4
Ah.10g028140 Amaranthus hybridus HOM05D008204 ORTHO05D010378 5.3e-29 131.0 84 91.7
arahy.Tifrunner.gnm1.ann1.4CE1ET Arachis hypogaea HOM05D008204 ORTHO05D010378 5.3e-29 131.0 84 90.5
LjContig00439g0017375 Lotus japonicus HOM05D008204 ORTHO05D010378 5.3e-29 131.0 84 90.5
Aqoxy12s023 Aquilegia oxysepala HOM05D008204 ORTHO05D010378 1.5e-28 129.4 84 90.5
Dinv06665 Davidia involucrata HOM05D008204 ORTHO05D010378 2.0e-28 129.0 85 88.2
Lsat_1_v5_gn_0_35040 Lactuca sativa HOM05D008204 ORTHO05D010378 3.4e-28 128.3 83 90.4
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.3e-27 126.3 85 87.1
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.3e-27 126.3 85 87.1
CDE02G0407 Ceratophyllum demersum HOM05D008466 ORTHO05D010817 2.9e-27 125.2 87 86.2
Gorai.001G160700 Gossypium raimondii HOM05D008204 ORTHO05D010378 8.5e-27 123.6 81 91.4
Nitab4.5_0012599g0060 Nicotiana tabacum HOM05D008204 ORTHO05D010378 4.2e-26 121.3 86 83.7
HanXRQChr07g0188981 Helianthus annuus HOM05D008204 ORTHO05D010378 5.5e-26 120.9 88 84.1
Nitab4.5_0010333g0030 Nicotiana tabacum HOM05D008204 ORTHO05D010378 5.5e-26 120.9 85 83.5
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 2.5e-23 112.1 72 90.3
ClCG06G013560 Citrullus lanatus HOM05D005029 ORTHO05D006052 4.3e-23 111.3 87 75.9
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 4.3e-23 111.3 74 89.2
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 4.3e-23 111.3 74 89.2
Lsat_1_v5_gn_5_43061 Lactuca sativa HOM05D008204 ORTHO05D010378 1.3e-22 109.8 70 90.0
SEGI_24171 Sequoiadendron giganteum HOM05D008204 ORTHO05D010378 1.3e-22 109.8 100 71.0
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 4.8e-22 107.8 63 96.8
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 4.8e-22 107.8 70 90.0
FAN20G2339 Fragaria x ananassa HOM05D007533 ORTHO05D010378 1.4e-21 106.3 70 88.6
Aa31csc1168G40 Aethionema arabicum HOM05D008204 ORTHO05D010378 2.4e-21 105.5 64 93.8
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 2.6e-20 102.1 70 87.1
SHI54418 Sapria himalayana HOM05D008204 ORTHO05D010378 8.5e-19 97.1 71 84.5
SHI41393 Sapria himalayana HOM05D008204 ORTHO05D010378 1.9e-18 95.9 63 84.1
HanXRQChr11g0327851 Helianthus annuus HOM05D008204 ORTHO05D010378 4.2e-18 94.7 69 84.1
SHI51809 Sapria himalayana HOM05D008204 ORTHO05D010378 3.6e-17 91.7 62 87.1
SHI19534 Sapria himalayana HOM05D007533 ORTHO05D010378 7.4e-15 84.0 69 72.5
BraSC54t46364Z Brassica rapa HOM05D008204 ORTHO05D010378 1.1e-13 80.1 46 95.7
BolSC28t60309H Brassica oleracea HOM05D007533 ORTHO05D009622 1.4e-13 79.7 45 95.6
BolSC28t60365H Brassica oleracea HOM05D007533 ORTHO05D009622 1.4e-13 79.7 45 95.6
PSO764G0230 Papaver somniferum HOM05D017042 ORTHO05D018469 2.4e-13 79.0 55 80.0
Peaxi162Scf01098g00002 Petunia axillaris HOM05D007533 ORTHO05D009622 3.1e-13 78.6 63 79.4
HanXRQChr07g0189011 Helianthus annuus HOM05D008204 ORTHO05D010378 7.0e-13 77.4 54 85.2
unitig_87.g27951 Utricularia gibba HOM05D008204 ORTHO05D010378 2.2e-11 72.4 45 91.1
Mapoly0002s0163 Marchantia polymorpha HOM05D008204 ORTHO05D010378 2.9e-11 72.0 45 88.9
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 6.1e-09 64.3 54 70.4
SEGI_26273 Sequoiadendron giganteum HOM05D008204 ORTHO05D010378 8.0e-09 63.9 67 65.7
SHI23927 Sapria himalayana HOM05D007533 ORTHO05D009622 6.7e-08 60.8 50 72.0
Nitab4.5_0000172g1780 Nicotiana tabacum HOM05D008204 ORTHO05D010378 1.1e-07 60.1 43 79.1
Cre09.g402552 Chlamydomonas reinhardtii HOM05D008204 ORTHO05D010378 5.7e-07 57.8 88 38.6


User provided reference genes

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