Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G062542 Populus trichocarpa HOM05D008194 ORTHO05D010811 5.2e-27 123.6 62 100.0
RcHm_v2.0_MTg0498491 Rosa chinensis HOM05D008194 ORTHO05D010811 1.7e-25 118.6 64 96.9
Lsat_1_v5_gn_0_38140 Lactuca sativa HOM05D008194 ORTHO05D010811 1.4e-24 115.5 64 95.3
CsaV3_UNG208120 Cucumis sativus L. HOM05D008194 ORTHO05D010811 4.1e-24 114.0 62 96.8
Hma1.2p1_0580F.1_g182760 Hydrangea macrophylla HOM05D008194 ORTHO05D010811 4.1e-24 114.0 64 93.8
Peaxi162Scf00040g01212 Petunia axillaris HOM05D008194 ORTHO05D010811 7.0e-24 113.2 64 93.8
LjContig00439g0001200 Lotus japonicus HOM05D008194 ORTHO05D010811 1.2e-23 112.5 64 93.8
LjContig00439g0021834 Lotus japonicus HOM05D008194 ORTHO05D010811 1.2e-23 112.5 64 93.8
arahy.Tifrunner.gnm1.ann1.6G4HZT Arachis hypogaea HOM05D008194 ORTHO05D010811 1.0e-22 109.4 64 90.6
arahy.Tifrunner.gnm1.ann1.C43PR6 Arachis hypogaea HOM05D008194 ORTHO05D010811 1.0e-22 109.4 64 90.6
arahy.Tifrunner.gnm1.ann1.L892YY Arachis hypogaea HOM05D008194 ORTHO05D010811 1.0e-22 109.4 64 90.6
Peaxi162Scf00373g00823 Petunia axillaris HOM05D008194 ORTHO05D010811 1.7e-22 108.6 62 93.5
Lalb_Chr10g0094521 Lupinus albus HOM05D008194 ORTHO05D010811 3.0e-22 107.8 64 89.1
CDE02G4414 Ceratophyllum demersum HOM05D006493 ORTHO05D009864 2.1e-20 101.7 61 90.2
Solyc00g244290.1 Solanum lycopersicum HOM05D008194 ORTHO05D010811 1.4e-19 99.0 57 93.0
Solyc00g500316.1 Solanum lycopersicum HOM05D008194 ORTHO05D010811 1.4e-19 99.0 57 93.0
Sopen00g013510 Solanum pennellii HOM05D008194 ORTHO05D010811 1.2e-18 95.9 57 91.2
Nitab4.5_0000172g1570 Nicotiana tabacum HOM05D008194 ORTHO05D010811 3.7e-17 90.9 61 80.3
PGR069G0009 Punica granatum HOM05D006493 ORTHO05D009864 3.7e-17 90.9 51 94.1
Oeu025165.1 Olea europaea HOM05D008194 ORTHO05D010811 4.9e-17 90.5 54 90.7
Nn1g10151 Nelumbo nucifera HOM05D006493 ORTHO05D009864 6.4e-17 90.1 51 94.1
Glyma.01G136800 Glycine max HOM05D008194 ORTHO05D010811 8.3e-17 89.7 64 73.4
Aa31csc239G70 Aethionema arabicum HOM05D008194 ORTHO05D010811 5.4e-16 87.0 48 95.8
Nitab4.5_0000172g0130 Nicotiana tabacum HOM05D008194 ORTHO05D010811 9.2e-16 86.3 57 80.7
Thhalv10015951m.g Eutrema salsugineum HOM05D006493 ORTHO05D009864 7.8e-15 83.2 48 91.7
Nitab4.5_0000172g1790 Nicotiana tabacum HOM05D008194 ORTHO05D010811 1.0e-14 82.8 55 81.8
Nitab4.5_0008300g0050 Nicotiana tabacum HOM05D008194 ORTHO05D010811 1.0e-14 82.8 58 74.1
HanXRQChr07g0188931 Helianthus annuus HOM05D006493 ORTHO05D009864 1.3e-14 82.4 52 86.5
GSVIVG01007203001 Vitis vinifera HOM05D006493 ORTHO05D009864 1.7e-14 82.0 48 89.6
Mapoly0157s0028 Marchantia polymorpha HOM05D008466 ORTHO05D010817 5.0e-14 80.5 56 76.8
Nitab4.5_0008300g0040 Nicotiana tabacum HOM05D008194 ORTHO05D010811 2.1e-12 75.1 58 69.0
Peaxi162Scf00286g00017 Petunia axillaris HOM05D008194 ORTHO05D010811 3.6e-12 74.3 44 90.9
SHI34940 Sapria himalayana HOM05D008194 ORTHO05D010811 2.9e-09 64.7 60 61.7
Nitab4.5_0000055g0320 Nicotiana tabacum HOM05D008194 ORTHO05D010811 3.7e-09 64.3 58 67.2
HanXRQMTg0579071 Helianthus annuus HOM05D006493 ORTHO05D009864 1.0e-06 56.2 30 96.7
Nitab4.5_0001781g0110 Nicotiana tabacum HOM05D001560 ORTHO05D010811 1.7e-06 55.5 30 93.3


User provided reference genes

Program Settings