Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G062322 Populus trichocarpa HOM05D008793 ORTHO05D012151 2.9e-47 191.4 89 100.0
Lalb_Chr00c21g0406041 Lupinus albus HOM05D008793 ORTHO05D012151 9.4e-46 186.4 89 97.8
Lalb_Chr00c39g0409041 Lupinus albus HOM05D008793 ORTHO05D012151 9.4e-46 186.4 89 97.8
Lalb_Chr00c39g0409221 Lupinus albus HOM05D008793 ORTHO05D012151 9.4e-46 186.4 89 97.8
Lalb_Chr00c51g0413131 Lupinus albus HOM05D008793 ORTHO05D012151 9.4e-46 186.4 89 97.8
Aa31csc1081G10 Aethionema arabicum HOM05D008793 ORTHO05D012151 3.0e-44 181.4 89 95.5
Lsat_1_v5_gn_5_16580 Lactuca sativa HOM05D008793 ORTHO05D012151 5.1e-44 180.6 89 94.4
RcHm_v2.0_Chr1g0312971 Rosa chinensis HOM05D008793 ORTHO05D012151 2.0e-43 178.7 90 95.6
BolSC28t60404H Brassica oleracea HOM05D008793 ORTHO05D012151 1.0e-39 166.4 90 91.1
BraSC77t46637Z Brassica rapa HOM05D008793 ORTHO05D014415 1.0e-39 166.4 90 91.1
Nitab4.5_0012260g0050 Nicotiana tabacum HOM05D008793 ORTHO05D010994 1.7e-39 165.6 88 89.8
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 1.2e-37 159.5 82 91.5
MBI11_g09046_MAGBIO Magnolia biondii HOM05D008793 ORTHO05D012151 8.0e-37 156.8 88 85.2
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 3.0e-36 154.8 78 93.6
Nitab4.5_0000886g0220 Nicotiana tabacum HOM05D008793 ORTHO05D010994 2.8e-34 148.3 85 83.5
Nitab4.5_0001506g0030 Nicotiana tabacum HOM05D008793 ORTHO05D013999 6.5e-31 137.1 68 94.1
unitig_87.g27958 Utricularia gibba HOM05D008793 ORTHO05D012151 3.2e-30 134.8 66 95.5
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 5.5e-30 134.0 81 81.5
Nitab4.5_0000307g0310 Nicotiana tabacum HOM05D011634 ORTHO05D012151 7.2e-30 133.7 76 81.6
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 2.7e-29 131.7 69 89.9
SHI46362 Sapria himalayana HOM05D008793 ORTHO05D012151 2.7e-24 115.2 62 91.9
CDE02G0896 Ceratophyllum demersum HOM05D008793 ORTHO05D012151 7.7e-24 113.6 58 91.4
SHI49909 Sapria himalayana HOM05D008793 ORTHO05D012151 1.3e-23 112.8 90 70.0
SHI36773 Sapria himalayana HOM05D001560 ORTHO05D010994 1.9e-22 109.0 59 88.1
SHI36784 Sapria himalayana HOM05D001560 ORTHO05D010994 1.9e-22 109.0 59 88.1
SHI38215 Sapria himalayana HOM05D000743 ORTHO05D000580 4.2e-22 107.8 58 91.4
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 9.4e-22 106.7 55 92.7
SHI46273 Sapria himalayana HOM05D008793 ORTHO05D012151 8.0e-21 103.6 89 65.2
GSVIVG01031611001 Vitis vinifera HOM05D001560 ORTHO05D003613 1.4e-20 102.8 79 65.8
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 3.0e-20 101.7 57 86.0
SHI36973 Sapria himalayana HOM05D001560 ORTHO05D003613 6.8e-20 100.5 78 70.5
SHI39121 Sapria himalayana HOM05D000743 ORTHO05D000580 6.8e-20 100.5 55 85.5
Nitab4.5_0000844g0180 Nicotiana tabacum HOM05D008793 ORTHO05D010994 2.6e-19 98.6 79 63.3
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 3.4e-19 98.2 59 79.7
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 3.4e-19 98.2 59 79.7
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 4.4e-19 97.8 57 84.2
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 5.7e-19 97.4 56 83.9
SHI44092 Sapria himalayana HOM05D001560 ORTHO05D010994 5.7e-19 97.4 51 88.2
SHI36937 Sapria himalayana HOM05D008793 ORTHO05D012151 7.5e-19 97.1 56 83.9
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 3.7e-18 94.7 52 88.5
SHI50439 Sapria himalayana HOM05D001560 ORTHO05D010994 4.8e-18 94.4 51 88.2
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 6.3e-18 94.0 49 89.8
Sopen11g024950 Solanum pennellii HOM05D000004 ORTHO05D000002 8.3e-18 93.6 48 91.7
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-17 92.4 54 85.2
SHI37011 Sapria himalayana HOM05D000743 ORTHO05D000580 1.8e-17 92.4 52 86.5
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-17 90.9 53 83.0
SHI38100 Sapria himalayana HOM05D008793 ORTHO05D012151 2.7e-16 88.6 50 86.0
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-16 88.2 46 91.3
SHI35452 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-16 87.4 50 82.0
SHI43389 Sapria himalayana HOM05D000743 ORTHO05D000580 5.9e-16 87.4 55 81.8
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 7.7e-16 87.0 50 86.0
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-15 86.3 46 89.1
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-15 86.3 46 89.1
SHI43452 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-15 85.9 52 86.5
SHI36624 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-15 85.1 47 87.2
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 3.8e-15 84.7 48 85.4
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 3.8e-15 84.7 46 89.1
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 3.8e-15 84.7 50 82.0
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 8.6e-15 83.6 43 90.7
SHI36585 Sapria himalayana HOM05D001560 ORTHO05D003613 8.6e-15 83.6 50 84.0
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-14 82.8 46 84.8
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 1.9e-14 82.4 50 82.0
SHI40903 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-14 82.4 47 80.9
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-14 81.3 43 88.4
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 7.2e-14 80.5 46 84.8
BolSC28t60435H Brassica oleracea HOM05D008793 ORTHO05D012151 1.6e-13 79.3 45 88.9
BraSC77t46659Z Brassica rapa HOM05D008793 ORTHO05D012151 1.6e-13 79.3 45 88.9
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 2.1e-13 79.0 46 76.1
SalBow1G2595 Salvia bowleyana HOM05D009805 ORTHO05D010994 6.1e-13 77.4 39 92.3
SHI36018 Sapria himalayana HOM05D000743 ORTHO05D000580 6.1e-13 77.4 50 80.0
SHI39990 Sapria himalayana HOM05D001560 ORTHO05D010994 6.1e-13 77.4 43 83.7
arahy.Tifrunner.gnm1.ann1.WM32N3 Arachis hypogaea HOM05D009805 ORTHO05D010994 8.0e-13 77.0 36 91.7
Solyc11g045430.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 4.0e-12 74.7 52 69.2
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 6.8e-12 73.9 42 85.7
Nitab4.5_0000280g0180 Nicotiana tabacum HOM05D008793 ORTHO05D012151 8.9e-12 73.6 50 74.0
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 8.9e-12 73.6 63 65.1
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-11 72.8 45 80.0
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 4.4e-11 71.2 43 79.1
SHI37166 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-10 69.7 38 89.5
arahy.Tifrunner.gnm1.ann1.IE22H8 Arachis hypogaea HOM05D009805 ORTHO05D010994 3.7e-10 68.2 37 81.1
arahy.Tifrunner.gnm1.ann1.KWS21K Arachis hypogaea HOM05D009805 ORTHO05D010994 3.7e-10 68.2 37 81.1
SHI44330 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-09 66.6 38 84.2
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.4e-09 66.2 29 96.6
SHI35235 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-09 66.2 39 84.6
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-09 65.5 37 86.5
SHI31533 Sapria himalayana HOM05D000743 ORTHO05D000580 3.1e-09 65.1 42 76.2
SHI39078 Sapria himalayana HOM05D001560 ORTHO05D003613 3.1e-09 65.1 51 66.7
C01p35010 Brassica napus HOM05D008793 ORTHO05D014415 2.0e-08 62.4 37 83.8
Nitab4.5_0000172g0590 Nicotiana tabacum HOM05D008793 ORTHO05D012151 2.0e-08 62.4 36 80.6
SHI39754 Sapria himalayana HOM05D001560 ORTHO05D012151 4.5e-08 61.2 37 83.8
SHI36572 Sapria himalayana HOM05D001560 ORTHO05D010994 5.9e-08 60.8 37 83.8
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 3.3e-06 55.1 37 73.0


User provided reference genes

Program Settings