Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G062262 Populus trichocarpa HOM05D002965 ORTHO05D010536 3.9e-44 181.0 87 100.0
SabraMtG0009900 Salix brachista HOM05D002965 ORTHO05D010536 3.9e-44 181.0 87 100.0
Aqoxy3G01134 Aquilegia oxysepala HOM05D002965 ORTHO05D010536 2.3e-25 118.6 88 70.5
Gohir.D06G053851 Gossypium hirsutum HOM05D002965 ORTHO05D010536 2.0e-24 115.5 89 67.4
Solyc00g500226.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 2.6e-24 115.2 76 69.7
Solyc00g500262.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 2.6e-24 115.2 76 69.7
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 9.9e-24 113.2 75 69.3
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 9.9e-24 113.2 75 69.3
PGSC0003DMG400010573 Solanum tuberosum HOM05D002965 ORTHO05D010536 9.9e-24 113.2 76 68.4
Solyc06g074585.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 1.3e-23 112.8 76 68.4
BNapus_Darmor_BZH_scaffold_234p00050 Brassica napus HOM05D002965 ORTHO05D010536 8.3e-23 110.2 77 67.5
BolSC28t60357H Brassica oleracea HOM05D002965 ORTHO05D010536 8.3e-23 110.2 77 67.5
BraSC48t46254Z Brassica rapa HOM05D002965 ORTHO05D010536 8.3e-23 110.2 77 67.5
Solyc00g500114.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 4.1e-22 107.8 76 67.1
Lj6A7T8 Lonicera japonica HOM05D002965 ORTHO05D010536 3.5e-21 104.8 77 62.3
Ca_28560_v3 Cicer arietinum L. HOM05D002965 ORTHO05D010536 3.0e-20 101.7 73 67.1
AL3G44420 Arabidopsis lyrata HOM05D002965 ORTHO05D010536 5.1e-20 100.9 77 61.0
AT2G07674 Arabidopsis thaliana HOM05D002965 ORTHO05D010536 5.1e-20 100.9 77 61.0
ATMG01010 Arabidopsis thaliana HOM05D002965 ORTHO05D010536 5.1e-20 100.9 77 61.0
Sopen11g012750 Solanum pennellii HOM05D002660 ORTHO05D003902 5.1e-20 100.9 75 61.3
EL10Ac5g12181 Beta vulgaris HOM05D002965 ORTHO05D010536 1.5e-19 99.4 82 61.0
Sopen11g024950 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-19 99.4 74 62.2
CARHR283260 Cardamine hirsuta HOM05D002965 ORTHO05D010536 2.5e-19 98.6 77 59.7
Solyc11g045430.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 2.5e-19 98.6 76 60.5
Eucgr.I01860 Eucalyptus grandis HOM05D002965 ORTHO05D010536 4.3e-19 97.8 75 62.7
PGR028G0005 Punica granatum HOM05D002965 ORTHO05D010536 6.2e-18 94.0 71 63.4
PGR069G0002 Punica granatum HOM05D002965 ORTHO05D010536 6.2e-18 94.0 71 63.4
PGR069G0012 Punica granatum HOM05D002965 ORTHO05D010536 6.2e-18 94.0 71 63.4
PGR069G0018 Punica granatum HOM05D002965 ORTHO05D010536 6.2e-18 94.0 71 63.4
PGR071G0002 Punica granatum HOM05D002965 ORTHO05D010536 6.2e-18 94.0 71 63.4
Hma1.2p1_0290F.1_g114710 Hydrangea macrophylla HOM05D002965 ORTHO05D010536 2.4e-17 92.0 76 56.6
Hma1.2p1_0290F.1_g114715 Hydrangea macrophylla HOM05D002965 ORTHO05D010536 2.4e-17 92.0 76 56.6
SalBow1G3342 Salvia bowleyana HOM05D002965 ORTHO05D010536 2.4e-17 92.0 63 69.8
Aa31csc464G20 Aethionema arabicum HOM05D000743 ORTHO05D000580 3.1e-17 91.7 78 60.3
PGR028G0001 Punica granatum HOM05D002864 ORTHO05D007972 3.1e-17 91.7 77 59.7
CAN.G362.38 Capsicum annuum HOM05D002965 ORTHO05D010994 2.0e-16 89.0 72 56.9
ECA003G0005 Erigeron canadensis HOM05D002965 ORTHO05D000580 2.0e-16 89.0 75 58.7
ECA039G0005 Erigeron canadensis HOM05D002965 ORTHO05D010536 2.0e-16 89.0 75 58.7
HanXRQMTg0579151 Helianthus annuus HOM05D002965 ORTHO05D010536 2.6e-16 88.6 76 56.6
Thhalv10023135m.g Eutrema salsugineum HOM05D002965 ORTHO05D010536 3.4e-16 88.2 53 75.5
Glyma.17G186200 Glycine max HOM05D002965 ORTHO05D010536 3.4e-16 88.2 77 54.5
HanXRQChr07g0188971 Helianthus annuus HOM05D002965 ORTHO05D010536 9.9e-16 86.7 65 63.1
HanXRQChr10g0297161 Helianthus annuus HOM05D002965 ORTHO05D010536 2.9e-15 85.1 73 54.8
Gorai.001G160200 Gossypium raimondii HOM05D003783 ORTHO05D004568 6.4e-15 84.0 48 83.3
VMungo0251G1451 Vigna mungo HOM05D002965 ORTHO05D010536 8.4e-15 83.6 62 62.9
BcaC05g26887 Brassica carinata HOM05D002965 ORTHO05D010536 1.4e-14 82.8 58 65.5
Psat0s4951g0200 Pisum sativum HOM05D002965 ORTHO05D010812 5.4e-14 80.9 55 72.7
Gorai.013G137600 Gossypium raimondii HOM05D002965 ORTHO05D010536 1.2e-13 79.7 46 84.8
HanXRQChr02g0035251 Helianthus annuus HOM05D002965 ORTHO05D010536 2.1e-13 79.0 56 66.1
Psat0s7112g0120 Pisum sativum HOM05D002965 ORTHO05D010536 3.5e-13 78.2 55 70.9
TPR.G28262 Trifolium pratense HOM05D002965 ORTHO05D010536 8.7e-12 73.6 57 61.4
Peaxi162Scf00348g00058 Petunia axillaris HOM05D002965 ORTHO05D010994 3.3e-11 71.6 56 58.9
Solyc00g025300.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 4.3e-11 71.2 47 72.3
arahy.Tifrunner.gnm1.ann1.8LYJ6L Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-11 70.9 60 53.3
arahy.Tifrunner.gnm1.ann1.LH5L6M Arachis hypogaea HOM05D002965 ORTHO05D010536 5.6e-11 70.9 60 53.3
arahy.Tifrunner.gnm1.ann1.Y9PUBE Arachis hypogaea HOM05D004291 ORTHO05D005620 5.6e-11 70.9 60 53.3
Aa31csc1081G40 Aethionema arabicum HOM05D002965 ORTHO05D010536 2.1e-10 68.9 57 54.4
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 2.8e-10 68.6 41 75.6
HanXRQChr05g0134431 Helianthus annuus HOM05D002965 ORTHO05D010536 4.0e-09 64.7 57 54.4
arahy.Tifrunner.gnm1.ann1.5L8EUV Arachis hypogaea HOM05D007099 ORTHO05D009081 5.3e-09 64.3 44 72.7
arahy.Tifrunner.gnm1.ann1.S21A07 Arachis hypogaea HOM05D008923 ORTHO05D011423 5.3e-09 64.3 44 72.7
HanXRQChr11g0327841 Helianthus annuus HOM05D002965 ORTHO05D010536 1.5e-08 62.8 57 52.6
Nitab4.5_0002493g0010 Nicotiana tabacum HOM05D002965 ORTHO05D010536 1.5e-08 62.8 42 64.3
arahy.Tifrunner.gnm1.ann1.86CJ1T Arachis hypogaea HOM05D004291 ORTHO05D005620 5.8e-08 60.8 48 54.2
Solyc05g018800.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 7.6e-08 60.5 45 60.0
arahy.Tifrunner.gnm1.ann1.N1QJ6Q Arachis hypogaea HOM05D007099 ORTHO05D009081 6.4e-07 57.4 39 74.4
Solyc09g057840.1 Solanum lycopersicum HOM05D002965 ORTHO05D390637 9.3e-06 53.5 45 55.6


User provided reference genes

Program Settings