Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G062061 Populus trichocarpa HOM05D010604 ORTHO05D012476 4.8e-128 461.1 218 100.0
arahy.Tifrunner.gnm1.ann1.KZ3I51 Arachis hypogaea HOM05D010604 ORTHO05D012476 6.9e-58 228.0 196 66.3
VMungo0329G0006 Vigna mungo HOM05D010604 ORTHO05D012476 1.9e-55 219.9 184 64.7
CsaV3_UNG209450 Cucumis sativus L. HOM05D010604 ORTHO05D012476 2.1e-46 189.9 88 98.9
Lsat_1_v5_gn_4_50261 Lactuca sativa HOM05D004291 ORTHO05D005620 2.1e-46 189.9 88 98.9
Lsat_1_v5_gn_5_152921 Lactuca sativa HOM05D010604 ORTHO05D012476 2.1e-46 189.9 88 98.9
SHI37160 Sapria himalayana HOM05D010604 ORTHO05D012476 2.1e-46 189.9 159 65.4
RhsimMtG0000800 Rhododendron simsii HOM05D010604 ORTHO05D012476 6.0e-46 188.3 86 100.0
arahy.Tifrunner.gnm1.ann1.05XESX Arachis hypogaea HOM05D010604 ORTHO05D012476 1.8e-45 186.8 88 97.7
arahy.Tifrunner.gnm1.ann1.0LX666 Arachis hypogaea HOM05D010604 ORTHO05D012476 1.3e-43 180.6 87 96.6
Sopen09g020260 Solanum pennellii HOM05D010604 ORTHO05D012476 3.6e-38 162.5 104 77.9
Solyc09g056100.2 Solanum lycopersicum HOM05D010604 ORTHO05D012476 1.4e-29 134.0 98 66.3
Lsat_1_v5_gn_5_118280 Lactuca sativa HOM05D001030 ORTHO05D003090 1.3e-24 117.5 65 83.1
Nitab4.5_0005831g0060 Nicotiana tabacum HOM05D010604 ORTHO05D012476 1.6e-22 110.5 62 82.3
Hma1.2p1_0159F.1_g070500 Hydrangea macrophylla HOM05D010604 ORTHO05D012476 6.1e-22 108.6 59 84.7
Nitab4.5_0001291g0050 Nicotiana tabacum HOM05D009475 ORTHO05D012476 3.1e-18 96.3 51 88.2
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 3.1e-18 96.3 117 52.1
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.2e-17 94.4 122 49.2
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 2.0e-17 93.6 117 51.3
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 2.0e-17 93.6 117 51.3
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.0e-17 93.6 117 51.3
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 2.0e-17 93.6 117 51.3
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 2.0e-17 93.6 117 51.3
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 2.6e-17 93.2 221 34.8
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 4.5e-17 92.4 126 49.2
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 4.5e-17 92.4 117 50.4
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 7.7e-17 91.7 117 50.4
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 1.0e-16 91.3 117 51.3
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 1.3e-16 90.9 117 50.4
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.2e-16 90.1 117 50.4
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.2e-16 90.1 117 50.4
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.2e-16 90.1 117 50.4
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.9e-16 89.7 117 50.4
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 8.5e-16 88.2 118 50.0
SEGI_10061 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 7.2e-15 85.1 177 35.6
SEGI_13287 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 6.1e-14 82.0 105 44.8
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.0e-13 81.3 126 42.1
SHI37614 Sapria himalayana HOM05D000963 ORTHO05D005131 4.0e-13 79.3 118 46.6
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.7e-13 78.6 70 61.4
VMungo1024G0002 Vigna mungo HOM05D000963 ORTHO05D005131 6.7e-13 78.6 114 43.0
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 8.8e-13 78.2 132 43.2
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 5.7e-12 75.5 70 60.0
SHI47131 Sapria himalayana HOM05D000963 ORTHO05D005131 9.7e-12 74.7 108 47.2
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 2.2e-11 73.6 139 38.8
Nitab4.5_0000017g0110 Nicotiana tabacum HOM05D000963 ORTHO05D005131 2.8e-11 73.2 97 47.4
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 4.8e-11 72.4 118 42.4
TPR.G39817 Trifolium pratense HOM05D010604 ORTHO05D029578 4.8e-11 72.4 36 91.7
SHI42531 Sapria himalayana HOM05D000963 ORTHO05D005131 8.2e-11 71.6 108 44.4
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 1.4e-10 70.9 50 70.0
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 1.4e-10 70.9 50 70.0
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 2.4e-10 70.1 53 66.0
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 2.4e-10 70.1 48 70.8
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 3.1e-10 69.7 51 68.6
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 3.1e-10 69.7 51 68.6
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 3.1e-10 69.7 51 68.6
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 4.1e-10 69.3 49 69.4
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 4.1e-10 69.3 91 46.2
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 4.1e-10 69.3 49 69.4
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 4.1e-10 69.3 48 70.8
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.0e-10 68.6 70 52.9
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.6e-09 67.4 49 67.3
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 2.0e-09 67.0 49 69.4
SGA_v2.0_scaffold400G50819 Striga asiatica HOM05D010604 ORTHO05D029578 2.0e-09 67.0 35 85.7
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 2.7e-09 66.6 48 68.8
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 2.7e-09 66.6 48 68.8
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 3.5e-09 66.2 77 50.6
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 3.5e-09 66.2 118 39.8
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.5e-09 65.9 53 62.3
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 5.9e-09 65.5 57 57.9
Hma1.2p1_0045F.1_g026530 Hydrangea macrophylla HOM05D000963 ORTHO05D005131 5.9e-09 65.5 108 41.7
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.7e-09 65.1 50 66.0
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.7e-09 65.1 50 64.0
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.0e-08 64.7 48 66.7
MELO3C026409.2 Cucumis melo HOM05D010604 ORTHO05D012476 1.3e-08 64.3 37 81.1
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 5.0e-08 62.4 106 44.3
SHI36889 Sapria himalayana HOM05D000963 ORTHO05D005131 6.5e-08 62.0 78 48.7
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 8.5e-08 61.6 49 63.3
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 8.5e-08 61.6 50 62.0
arahy.Tifrunner.gnm1.ann1.VYL27N Arachis hypogaea HOM05D026121 ORTHO05D026928 1.5e-07 60.8 41 73.2
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.9e-07 60.5 48 62.5
Gohir.A01G056250 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.5e-07 60.1 50 58.0
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 4.2e-07 59.3 85 44.7
Sc14g0005060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 5.5e-07 58.9 50 62.0
Prupe.6G021900 Prunus persica HOM05D009377 ORTHO05D011410 7.2e-07 58.5 37 75.7
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 9.4e-07 58.2 59 52.5
FvH4_5g07210 Fragaria vesca HOM05D003221 ORTHO05D029578 2.1e-06 57.0 33 72.7
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 2.1e-06 57.0 50 60.0
SHI36631 Sapria himalayana HOM05D010604 ORTHO05D012476 3.6e-06 56.2 29 82.8
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.7e-06 55.8 74 50.0
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 4.7e-06 55.8 50 58.0
Peaxi162Scf00224g00612 Petunia axillaris HOM05D012761 ORTHO05D013554 4.7e-06 55.8 38 73.7
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 4.7e-06 55.8 38 65.8
Peaxi162Scf00040g00416 Petunia axillaris HOM05D000016 ORTHO05D000109 8.0e-06 55.1 25 96.0
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 8.0e-06 55.1 35 71.4


User provided reference genes

Program Settings