Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.7e-174 615.9 307 100.0
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 5.0e-147 524.6 307 83.4
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 2.5e-146 522.3 307 81.8
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 3.2e-146 521.9 307 80.8
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 2.1e-145 519.2 307 80.8
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 6.1e-145 517.7 307 81.4
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 6.1e-145 517.7 293 89.8
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 1.4e-144 516.5 307 80.8
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 1.4e-144 516.5 307 81.1
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 3.0e-144 515.4 307 81.1
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 4.0e-144 515.0 307 79.5
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 6.8e-144 514.2 304 80.6
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 1.2e-143 513.5 307 81.4
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 2.6e-143 512.3 307 79.5
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 4.4e-143 511.5 307 80.5
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 2.2e-142 509.2 307 80.8
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 4.9e-142 508.1 307 80.1
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 1.1e-141 506.9 307 80.1
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 2.4e-141 505.8 307 80.8
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 9.2e-141 503.8 307 79.5
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 9.2e-141 503.8 307 79.8
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 1.2e-140 503.4 307 79.5
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 1.2e-140 503.4 307 79.5
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 5.9e-140 501.1 307 79.2
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 5.9e-140 501.1 307 78.8
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 7.7e-140 500.7 307 79.5
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 7.7e-140 500.7 307 79.5
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 1.0e-139 500.4 307 78.8
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 1.3e-139 500.0 307 78.2
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.7e-139 499.6 307 78.5
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 1.7e-139 499.6 307 78.5
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 2.9e-139 498.8 307 79.8
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.9e-139 498.8 307 77.9
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 3.8e-139 498.4 307 78.2
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 5.0e-139 498.0 307 80.1
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 5.0e-139 498.0 307 77.9
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 1.1e-138 496.9 307 77.2
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.5e-138 496.5 307 78.2
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 3.3e-138 495.4 307 79.2
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.3e-138 495.0 323 75.9
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 4.3e-138 495.0 307 79.8
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 4.3e-138 495.0 307 75.9
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 9.5e-138 493.8 307 79.2
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 1.6e-137 493.0 307 79.2
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 2.8e-137 492.3 307 78.2
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 2.8e-137 492.3 307 79.2
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 4.7e-137 491.5 307 76.9
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 4.7e-137 491.5 307 78.5
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 6.1e-137 491.1 307 78.5
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 8.0e-137 490.7 307 78.2
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 1.4e-136 490.0 307 76.9
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 1.8e-136 489.6 307 79.2
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 6.8e-136 487.6 307 76.2
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 8.9e-136 487.3 307 76.5
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 1.2e-135 486.9 307 76.2
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 2.0e-135 486.1 307 75.6
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 2.6e-135 485.7 288 80.9
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 3.7e-134 481.9 307 78.2
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 4.9e-134 481.5 307 77.9
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 3.2e-133 478.8 391 64.5
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 3.5e-132 475.3 306 74.5
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 5.9e-132 474.6 306 74.2
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 2.3e-131 472.6 358 67.6
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 3.0e-131 472.2 307 72.0
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 8.6e-131 470.7 307 73.3
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 1.9e-130 469.5 307 73.6
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 6.2e-129 464.5 307 72.6
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 6.2e-129 464.5 307 75.9
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 1.4e-128 463.4 307 71.7
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 1.4e-128 463.4 370 64.3
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 1.2e-127 460.3 371 62.8
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 5.8e-127 458.0 307 72.3
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.4e-125 453.4 306 74.5
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 9.2e-125 450.7 277 79.4
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 6.0e-124 448.0 276 79.3
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 7.8e-124 447.6 314 72.9
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 8.9e-120 434.1 277 74.7
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 4.4e-119 431.8 278 74.8
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.4e-117 426.8 277 74.4
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 5.1e-115 418.3 307 66.4
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 5.2e-112 408.3 312 63.5
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 5.8e-111 404.8 243 81.5
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 6.0e-108 394.8 235 81.7
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 3.6e-105 385.6 310 60.3
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 2.6e-103 379.4 307 63.5
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 1.0e-99 367.5 297 59.9
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.5e-98 363.6 236 75.0
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 1.9e-98 363.2 306 55.6
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 2.0e-79 300.1 316 48.7
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 4.6e-76 288.9 268 57.8
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 5.5e-69 265.4 190 65.3
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 6.9e-56 221.9 185 64.9
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 2.0e-55 220.3 282 42.2
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 2.6e-55 219.9 135 78.5
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 3.4e-55 219.5 310 41.3
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.1e-53 214.5 148 71.6
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 1.2e-52 211.1 564 28.7
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 9.2e-24 115.2 88 70.5
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.9e-21 107.5 222 32.4
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 1.6e-20 104.4 77 62.3
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 4.4e-18 96.3 72 68.1
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 1.3e-17 94.7 95 45.3
Cre06.g298950 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D143024 4.6e-07 59.7 164 31.7
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 2.3e-06 57.4 34 79.4
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 5.0e-06 56.2 39 71.8


User provided reference genes

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