Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 1.1e-183 646.7 388 100.0
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 2.4e-146 522.7 392 83.9
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 7.8e-121 438.0 396 67.7
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 1.4e-93 347.4 320 69.1
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 1.4e-93 347.4 320 69.1
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 2.3e-72 276.9 392 53.3
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 4.2e-58 229.6 402 47.0
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 5.7e-55 219.2 390 44.9
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 5.7e-55 219.2 391 40.9
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 7.4e-55 218.8 388 42.8
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.4e-53 213.8 390 42.6
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 3.1e-53 213.4 388 42.3
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 1.5e-52 211.1 403 46.4
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 3.5e-52 209.9 384 47.7
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 2.9e-51 206.8 391 44.2
Manes.12G112400 Manihot esculenta HOM05D005407 ORTHO05D006544 3.2e-50 203.4 400 44.8
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 3.9e-48 196.4 406 38.4
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 2.0e-47 194.1 378 44.7
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 3.3e-47 193.4 414 39.4
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 9.7e-47 191.8 379 37.5
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 1.4e-45 188.0 377 41.4
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 3.1e-45 186.8 389 44.0
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 7.0e-45 185.7 393 41.0
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.0e-44 184.1 384 39.6
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.7e-43 181.0 382 41.6
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 5.0e-43 179.5 382 41.4
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 8.5e-43 178.7 385 36.9
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.1e-42 178.3 372 41.4
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 1.1e-42 178.3 339 43.1
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 4.2e-42 176.4 395 40.8
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 9.4e-42 175.3 389 42.9
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 6.1e-41 172.6 354 41.5
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 1.2e-39 168.3 386 42.7
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 2.6e-39 167.2 384 35.4
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 1.1e-37 161.8 374 39.3
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 1.8e-37 161.0 395 39.7
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 4.1e-37 159.8 392 41.6
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 5.9e-36 156.0 349 39.0
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 2.2e-35 154.1 396 40.7
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 8.0e-33 145.6 400 41.2
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 4.0e-32 143.3 391 39.6
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 8.8e-32 142.1 402 35.8
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 3.4e-31 140.2 364 39.8
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 9.8e-31 138.7 347 36.9
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 4.9e-30 136.3 362 36.7
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 4.9e-30 136.3 375 36.0
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 2.7e-28 130.6 374 35.0
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 3.5e-28 130.2 376 34.6
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 7.7e-28 129.0 359 32.3
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 7.7e-28 129.0 358 35.2
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 1.3e-27 128.3 203 46.3
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 2.3e-27 127.5 351 36.8
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 8.6e-27 125.6 400 36.8
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 8.6e-27 125.6 383 36.6
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 1.5e-26 124.8 359 36.5
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 1.9e-26 124.4 396 36.1
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 3.3e-26 123.6 211 44.5
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 3.3e-26 123.6 391 33.0
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 4.2e-26 123.2 371 35.6
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 9.5e-26 122.1 366 41.5
Dinv30062 Davidia involucrata HOM05D005407 ORTHO05D006544 2.8e-25 120.6 282 38.3
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 1.4e-24 118.2 396 35.4
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 2.3e-24 117.5 367 35.4
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 3.0e-24 117.1 367 34.9
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 3.0e-24 117.1 367 34.9
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 3.0e-24 117.1 364 38.7
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 5.2e-24 116.3 381 35.7
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 6.8e-24 115.9 365 32.9
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 8.9e-24 115.5 353 34.6
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 1.5e-23 114.8 369 35.8
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 2.0e-23 114.4 386 32.4
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 2.0e-23 114.4 362 35.1
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 4.4e-23 113.2 380 36.1
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 7.5e-23 112.5 358 31.8
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 9.8e-23 112.1 335 33.1
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 1.3e-22 111.7 389 38.6
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 2.9e-22 110.5 346 30.9
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 6.3e-22 109.4 353 30.9
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.1e-21 108.6 335 32.5
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 2.4e-21 107.5 369 33.1
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 3.2e-21 107.1 349 32.7
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 7.0e-21 105.9 328 34.1
Lalb_Chr16g0389101 Lupinus albus HOM05D005407 ORTHO05D006544 1.2e-20 105.1 274 34.3
Medtr4g095320 Medicago truncatula HOM05D005407 ORTHO05D006544 2.0e-20 104.4 396 33.3
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 2.7e-20 104.0 414 28.7
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 4.6e-20 103.2 337 32.9
AL8G43980 Arabidopsis lyrata HOM05D005407 ORTHO05D006544 2.3e-19 100.9 215 36.7
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 2.3e-19 100.9 367 33.5
AT5G67350 Arabidopsis thaliana HOM05D005407 ORTHO05D006544 2.9e-19 100.5 215 37.7
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 5.0e-19 99.8 379 30.9
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 8.6e-19 99.0 380 30.0
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 1.9e-18 97.8 360 32.5
Phvul.003G237500 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 7.3e-18 95.9 402 36.8
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 1.2e-17 95.1 385 27.8
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 2.8e-17 94.0 245 35.5
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 2.8e-17 94.0 245 35.5
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 2.8e-17 94.0 245 35.5
Carub.0008s2714 Capsella rubella HOM05D005407 ORTHO05D006544 3.6e-17 93.6 199 37.2
Sp2g29310 Schrenkiella parvula HOM05D005407 ORTHO05D006544 1.0e-16 92.0 352 30.1
Peaxi162Scf00365g00076 Petunia axillaris HOM05D005407 ORTHO05D006544 2.3e-16 90.9 354 31.6
A09p09420 Brassica napus HOM05D005407 ORTHO05D006544 3.1e-16 90.5 365 30.1
Thhalv10005384m.g Eutrema salsugineum HOM05D005407 ORTHO05D006544 6.8e-16 89.4 214 35.5
Aa31LG1G15900 Aethionema arabicum HOM05D005407 ORTHO05D006544 2.0e-15 87.8 321 29.6
BolC7t42952H Brassica oleracea HOM05D005407 ORTHO05D006544 2.0e-15 87.8 196 35.7
CARHR280260 Cardamine hirsuta HOM05D005407 ORTHO05D006544 3.4e-15 87.0 214 35.5
C09p11100 Brassica napus HOM05D005407 ORTHO05D006544 2.9e-14 84.0 243 34.6
vmacro17985 Vaccinium macrocarpon HOM05D005407 ORTHO05D006544 2.9e-14 84.0 158 43.0
BolC9t53999H Brassica oleracea HOM05D005407 ORTHO05D006544 4.9e-14 83.2 240 35.0
Rhsim08G0096100 Rhododendron simsii HOM05D005407 ORTHO05D006544 4.9e-14 83.2 173 41.0
TAR376G1145 Trochodendron aralioides HOM05D005407 ORTHO05D006544 4.9e-14 83.2 255 37.3
CSS0012811 Camellia sinensis var. sinensis HOM05D005407 ORTHO05D006544 6.4e-14 82.8 332 31.6
BcaC04g23209 Brassica carinata HOM05D005407 ORTHO05D006544 1.1e-13 82.0 210 36.2
A07p16540 Brassica napus HOM05D005407 ORTHO05D006544 1.1e-13 82.0 198 33.8
BraA07t29378Z Brassica rapa HOM05D005407 ORTHO05D006544 1.1e-13 82.0 198 33.8
BraA09t36591Z Brassica rapa HOM05D005407 ORTHO05D006544 1.4e-13 81.6 387 29.7
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 2.4e-13 80.9 376 30.3
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 7.0e-13 79.3 375 27.7
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.6e-12 78.2 181 40.9
MELO3C020864.2 Cucumis melo HOM05D005407 ORTHO05D006544 2.7e-12 77.4 222 42.3
Sed0011473 Sechium edule HOM05D005407 ORTHO05D006544 4.6e-12 76.6 353 33.1
unitig_52.g17607 Utricularia gibba HOM05D005407 ORTHO05D006544 1.3e-11 75.1 354 28.0
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 1.7e-11 74.7 269 30.5
Peaxi162Scf00264g00321 Petunia axillaris HOM05D005407 ORTHO05D006544 3.9e-11 73.6 207 31.4
BcaB04g20064 Brassica carinata HOM05D005407 ORTHO05D006544 6.6e-11 72.8 376 29.5
CDE04G2817 Ceratophyllum demersum HOM05D005407 ORTHO05D006544 6.6e-11 72.8 209 34.4
unitig_62.g23420 Utricularia gibba HOM05D005407 ORTHO05D006544 8.6e-11 72.4 347 28.2
Solyc03g150114.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 3.3e-10 70.5 190 33.2
HPP92_007853 Vanilla planifolia HOM05D005407 ORTHO05D006544 2.1e-09 67.8 247 27.9
CsaV3_2G016540 Cucumis sativus L. HOM05D005407 ORTHO05D006544 1.1e-08 65.5 350 31.7
ClCG02G012410 Citrullus lanatus HOM05D005407 ORTHO05D006544 2.3e-08 64.3 271 37.6
Migut.H00374 Erythranthe guttata HOM05D005407 ORTHO05D006544 3.4e-07 60.5 357 30.8
SGA_v2.0_scaffold143G35780 Striga asiatica HOM05D005407 ORTHO05D006544 4.4e-07 60.1 243 35.0
ATR0661G396 Amborella trichopoda HOM05D005407 ORTHO05D006544 9.8e-07 58.9 215 30.2


User provided reference genes

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