Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G049400 Populus trichocarpa HOM05D008343 ORTHO05D009841 7.3e-40 166.8 85 100.0
Manes.12G110633 Manihot esculenta HOM05D008343 ORTHO05D009841 2.8e-15 85.1 68 64.7
QL06p040048 Quercus lobata HOM05D008343 ORTHO05D009841 1.5e-13 79.3 90 52.2
GSVIVG01032935001 Vitis vinifera HOM05D000114 ORTHO05D000075 5.5e-11 70.9 89 50.6
Potri.007G049500 Populus trichocarpa HOM05D008343 ORTHO05D009841 1.2e-10 69.7 75 56.0
GSVIVG01000214001 Vitis vinifera HOM05D008343 ORTHO05D009841 2.1e-10 68.9 70 55.7
CSS0015714 Camellia sinensis var. sinensis HOM05D008343 ORTHO05D009841 2.7e-10 68.6 71 60.6
Dinv30037 Davidia involucrata HOM05D008343 ORTHO05D009841 3.6e-10 68.2 70 57.1
Potri.016G015600 Populus trichocarpa HOM05D008343 ORTHO05D009841 1.4e-09 66.2 84 50.0
Haze_15346 Corylus avellana HOM05D008343 ORTHO05D009841 2.3e-09 65.5 57 68.4
Dinv26871 Davidia involucrata HOM05D008343 ORTHO05D009841 3.9e-09 64.7 72 58.3
Dinv30038 Davidia involucrata HOM05D008343 ORTHO05D009841 6.7e-09 63.9 66 62.1
Potri.006G008066 Populus trichocarpa HOM05D008343 ORTHO05D009841 6.7e-09 63.9 79 51.9
CiPaw.02G005800 Carya illinoinensis HOM05D008343 ORTHO05D009841 8.8e-09 63.5 66 56.1
TAR376G0584 Trochodendron aralioides HOM05D008343 ORTHO05D009841 2.5e-08 62.0 70 57.1
QL06p040052 Quercus lobata HOM05D008343 ORTHO05D009841 3.3e-08 61.6 57 57.9
MD02G1179300 Malus domestica HOM05D008343 ORTHO05D009841 4.3e-08 61.2 60 61.7
Cfa004065 Carpinus fangiana HOM05D008343 ORTHO05D009841 5.7e-08 60.8 57 63.2
Eucgr.H02236 Eucalyptus grandis HOM05D008343 ORTHO05D009841 5.7e-08 60.8 58 62.1
Potri.005G142900 Populus trichocarpa HOM05D008343 ORTHO05D009841 9.7e-08 60.1 78 48.7
Hma1.2p1_0239F.1_g099990 Hydrangea macrophylla HOM05D008343 ORTHO05D009841 1.3e-07 59.7 58 56.9
CSS0026698 Camellia sinensis var. sinensis HOM05D008343 ORTHO05D009841 2.8e-07 58.5 81 49.4
Prupe.6G228500 Prunus persica HOM05D008343 ORTHO05D009841 2.8e-07 58.5 66 53.0
Eucgr.H02233 Eucalyptus grandis HOM05D008343 ORTHO05D009841 3.7e-07 58.2 66 56.1
Nn1g04695 Nelumbo nucifera HOM05D008343 ORTHO05D009841 3.7e-07 58.2 85 50.6
RcHm_v2.0_Chr1g0340091 Rosa chinensis HOM05D014781 ORTHO05D009841 3.7e-07 58.2 64 57.8
MELO3C007588.2 Cucumis melo HOM05D024155 ORTHO05D010780 4.8e-07 57.8 82 46.3
TAR376G0451 Trochodendron aralioides HOM05D008343 ORTHO05D009841 1.1e-06 56.6 44 68.2
Ciclev10027017m.g Citrus clementina HOM05D008343 ORTHO05D009841 1.4e-06 56.2 78 50.0
THA.LOC104813832 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 1.4e-06 56.2 56 51.8
Prupe.3G151900 Prunus persica HOM05D008343 ORTHO05D009841 1.8e-06 55.8 50 58.0
Eucgr.H02234 Eucalyptus grandis HOM05D008343 ORTHO05D009841 2.4e-06 55.5 47 57.4
Eucgr.H02237 Eucalyptus grandis HOM05D008343 ORTHO05D009841 2.4e-06 55.5 47 57.4
Eucgr.H02240 Eucalyptus grandis HOM05D008343 ORTHO05D009841 2.4e-06 55.5 47 57.4
THA.LOC104807602 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 2.4e-06 55.5 56 51.8
THA.LOC109116433 Tarenaya hassleriana HOM05D008734 ORTHO05D010780 2.4e-06 55.5 56 51.8
Eucgr.H01293 Eucalyptus grandis HOM05D008343 ORTHO05D009841 3.1e-06 55.1 54 57.4
MD15G1289400 Malus domestica HOM05D014781 ORTHO05D009841 3.1e-06 55.1 60 55.0
TAR376G0088 Trochodendron aralioides HOM05D008343 ORTHO05D009841 3.1e-06 55.1 46 65.2
TAR376G1160 Trochodendron aralioides HOM05D008343 ORTHO05D009841 4.1e-06 54.7 47 66.0
Thecc.01G063900 Theobroma cacao HOM05D018273 ORTHO05D009841 5.3e-06 54.3 80 56.2
CiPaw.01G012500 Carya illinoinensis HOM05D008343 ORTHO05D009841 6.9e-06 53.9 63 54.0
Eucgr.H02229 Eucalyptus grandis HOM05D008343 ORTHO05D009841 6.9e-06 53.9 71 45.1
Lj4g0017585 Lotus japonicus HOM05D008343 ORTHO05D009841 9.1e-06 53.5 79 48.1
Nn1g04690 Nelumbo nucifera HOM05D008343 ORTHO05D271030 9.1e-06 53.5 73 53.4


User provided reference genes

Program Settings