Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 7.5e-52 206.8 100 100.0
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 5.2e-45 184.1 101 89.1
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 9.9e-44 179.9 101 87.1
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 1.3e-43 179.5 101 88.1
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 1.8e-37 159.1 101 76.2
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 3.1e-37 158.3 97 82.5
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 3.1e-37 158.3 97 80.4
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 4.0e-37 157.9 96 81.2
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 5.2e-37 157.5 98 79.6
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 6.8e-37 157.1 96 79.2
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 8.9e-37 156.8 97 79.4
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 8.9e-37 156.8 98 77.6
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 2.0e-36 155.6 99 73.7
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 2.0e-36 155.6 97 77.3
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 2.6e-36 155.2 99 75.8
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 3.4e-36 154.8 98 77.6
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 3.4e-36 154.8 99 74.7
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 4.4e-36 154.5 96 75.0
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 5.8e-36 154.1 98 77.6
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 7.6e-36 153.7 97 74.2
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 7.6e-36 153.7 97 74.2
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 7.6e-36 153.7 97 74.2
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 7.6e-36 153.7 97 74.2
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 7.6e-36 153.7 97 74.2
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 7.6e-36 153.7 99 74.7
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 7.6e-36 153.7 98 76.5
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 7.6e-36 153.7 99 74.7
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 9.9e-36 153.3 98 76.5
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 9.9e-36 153.3 98 76.5
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 9.9e-36 153.3 96 77.1
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 1.3e-35 152.9 97 74.2
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 1.7e-35 152.5 96 74.0
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 2.2e-35 152.1 101 74.3
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 2.2e-35 152.1 96 77.1
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.2e-35 152.1 98 76.5
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 2.2e-35 152.1 98 76.5
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 2.9e-35 151.8 98 76.5
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 3.8e-35 151.4 97 75.3
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 4.9e-35 151.0 98 75.5
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 6.4e-35 150.6 98 77.6
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 8.4e-35 150.2 97 73.2
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 8.4e-35 150.2 97 77.3
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 8.4e-35 150.2 97 72.2
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 8.4e-35 150.2 99 71.7
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 8.4e-35 150.2 96 75.0
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 8.4e-35 150.2 96 75.0
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 8.4e-35 150.2 99 72.7
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 8.4e-35 150.2 96 77.1
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 8.4e-35 150.2 98 76.5
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 1.1e-34 149.8 97 72.2
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 1.1e-34 149.8 97 75.3
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.1e-34 149.8 96 75.0
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 1.9e-34 149.1 101 74.3
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 1.9e-34 149.1 98 72.4
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 1.9e-34 149.1 98 75.5
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 1.9e-34 149.1 96 76.0
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 2.4e-34 148.7 100 71.0
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 3.2e-34 148.3 96 74.0
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 3.2e-34 148.3 96 74.0
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 5.4e-34 147.5 96 75.0
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 5.4e-34 147.5 96 75.0
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 5.4e-34 147.5 100 71.0
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 7.1e-34 147.1 97 72.2
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 9.2e-34 146.7 101 74.3
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 1.2e-33 146.4 93 75.3
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 1.6e-33 146.0 96 77.1
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 2.1e-33 145.6 98 69.4
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 2.1e-33 145.6 100 68.0
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 2.7e-33 145.2 100 70.0
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 3.5e-33 144.8 96 74.0
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 3.5e-33 144.8 97 74.2
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 3.5e-33 144.8 100 67.0
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 3.5e-33 144.8 100 67.0
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 6.0e-33 144.1 100 68.0
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 7.8e-33 143.7 98 70.4
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 7.8e-33 143.7 96 72.9
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.0e-32 143.3 99 68.7
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 1.0e-32 143.3 98 68.4
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 1.3e-32 142.9 96 71.9
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 1.7e-32 142.5 99 67.7
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 1.7e-32 142.5 98 70.4
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 1.7e-32 142.5 105 68.6
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 1.7e-32 142.5 101 69.3
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 2.3e-32 142.1 96 71.9
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 3.0e-32 141.7 100 68.0
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 5.1e-32 141.0 96 71.9
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 6.6e-32 140.6 98 70.4
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 8.7e-32 140.2 101 68.3
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 1.5e-31 139.4 99 65.7
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 1.9e-31 139.0 100 67.0
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 4.3e-31 137.9 97 70.1
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 4.3e-31 137.9 100 66.0
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 5.6e-31 137.5 98 69.4
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 9.6e-31 136.7 96 69.8
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 9.6e-31 136.7 99 69.7
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 4.8e-30 134.4 93 69.9
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 6.2e-30 134.0 93 66.7
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 1.1e-29 133.3 96 69.8
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 1.1e-29 133.3 104 64.4
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 1.4e-29 132.9 97 62.9
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 1.4e-29 132.9 96 64.6
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 2.4e-29 132.1 99 62.6
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 1.2e-28 129.8 91 68.1
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 4.4e-28 127.9 79 78.5
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 9.9e-28 126.7 78 75.6
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 1.7e-27 125.9 98 67.3
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 1.7e-27 125.9 96 67.7
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 5.4e-26 120.9 91 64.8
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 2.5e-23 112.1 73 71.2
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 3.6e-22 108.2 95 53.7
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 4.8e-22 107.8 100 51.0
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 1.3e-19 99.8 100 47.0
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 1.4e-18 96.3 97 46.4
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 1.8e-16 89.4 78 57.7
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 6.7e-16 87.4 88 48.9
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 2.5e-15 85.5 91 47.3
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 1.1e-13 80.1 76 60.5
RcHm_v2.0_Chr3g0487451 Rosa chinensis HOM05D032618 ORTHO05D007999 3.7e-06 55.1 35 65.7


User provided reference genes

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