Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G043200 Populus trichocarpa HOM05D007198 ORTHO05D008969 3.1e-106 388.7 224 100.0
Sabra07G0038100 Salix brachista HOM05D007198 ORTHO05D008969 6.1e-94 347.8 231 81.8
Dinv39859 Davidia involucrata HOM05D007198 ORTHO05D008969 3.1e-69 265.8 227 64.8
Prupe.7G134300 Prunus persica HOM05D007198 ORTHO05D008969 5.2e-69 265.0 230 65.7
MD02G1301600 Malus domestica HOM05D007198 ORTHO05D008969 1.5e-68 263.5 230 65.7
CiPaw.01G018700 Carya illinoinensis HOM05D007198 ORTHO05D008969 9.8e-68 260.8 225 66.2
TWI09G1591 Tripterygium wilfordii HOM05D007198 ORTHO05D008969 1.3e-67 260.4 229 65.1
Manes.12G101406 Manihot esculenta HOM05D007198 ORTHO05D008969 1.7e-67 260.0 238 63.9
QL06p041746 Quercus lobata HOM05D007198 ORTHO05D008969 4.9e-67 258.5 224 63.8
Haze_15409 Corylus avellana HOM05D007198 ORTHO05D008969 8.3e-67 257.7 253 60.1
RcHm_v2.0_Chr2g0105351 Rosa chinensis HOM05D007198 ORTHO05D008969 8.3e-67 257.7 225 65.3
Sed0013660 Sechium edule HOM05D007198 ORTHO05D008969 1.4e-66 256.9 224 64.7
ClCG01G016780 Citrullus lanatus HOM05D007198 ORTHO05D008969 2.4e-66 256.1 222 65.3
Actinidia16498 Actinidia chinensis HOM05D007198 ORTHO05D008969 4.1e-66 255.4 221 63.8
Nn1g04876 Nelumbo nucifera HOM05D007198 ORTHO05D008969 5.4e-66 255.0 227 63.0
CsaV3_6G043210 Cucumis sativus L. HOM05D007198 ORTHO05D008969 7.1e-66 254.6 222 65.3
CSS0000534 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 9.2e-66 254.2 226 63.3
CSS0048673 Camellia sinensis var. sinensis HOM05D007198 ORTHO05D008969 9.2e-66 254.2 226 63.3
PSO210G2416 Papaver somniferum HOM05D007198 ORTHO05D008969 9.2e-66 254.2 213 65.7
Eucgr.H01658 Eucalyptus grandis HOM05D007198 ORTHO05D008969 2.1e-65 253.1 225 62.7
FvH4_1g15950 Fragaria vesca HOM05D007198 ORTHO05D008969 4.6e-65 251.9 225 64.4
TAR628G0194 Trochodendron aralioides HOM05D007198 ORTHO05D008969 4.6e-65 251.9 205 66.3
PSO170G6483 Papaver somniferum HOM05D007198 ORTHO05D008969 7.8e-65 251.1 213 64.8
COL.COLO4_11404 Corchorus olitorius HOM05D007198 ORTHO05D008969 1.0e-64 250.8 226 62.8
ECA232G0395 Erigeron canadensis HOM05D007198 ORTHO05D008969 1.7e-64 250.0 226 61.9
Gohir.A12G069000 Gossypium hirsutum HOM05D007198 ORTHO05D008969 3.9e-64 248.8 226 62.8
MD02G1301800 Malus domestica HOM05D007198 ORTHO05D008969 3.9e-64 248.8 229 62.0
Gorai.008G075300 Gossypium raimondii HOM05D007198 ORTHO05D008969 5.1e-64 248.4 225 61.8
CANSAT01G0326 Cannabis sativa HOM05D007198 ORTHO05D008969 1.1e-63 247.3 228 63.2
Gohir.D12G068800 Gossypium hirsutum HOM05D007198 ORTHO05D008969 1.1e-63 247.3 220 63.2
GSVIVG01022140001 Vitis vinifera HOM05D007198 ORTHO05D008969 1.1e-63 247.3 216 63.9
FAN19G3022 Fragaria x ananassa HOM05D007198 ORTHO05D008969 7.3e-63 244.6 233 62.2
Hma1.2p1_0461F.1_g157845 Hydrangea macrophylla HOM05D007198 ORTHO05D008969 1.2e-62 243.8 219 62.6
Rhsim08G0101100 Rhododendron simsii HOM05D007198 ORTHO05D008969 2.8e-62 242.7 204 64.2
HanXRQChr07g0191591 Helianthus annuus HOM05D007198 ORTHO05D008969 1.4e-61 240.4 206 63.1
Aqoxy6G01332 Aquilegia oxysepala HOM05D007198 ORTHO05D008969 2.3e-61 239.6 227 62.6
MSTRG.2886 Avicennia marina HOM05D007198 ORTHO05D008969 2.3e-61 239.6 217 60.4
Cc07_g05960 Coffea canephora HOM05D007198 ORTHO05D008969 2.3e-61 239.6 221 60.6
PGR102G0107 Punica granatum HOM05D007198 ORTHO05D008969 2.3e-61 239.6 216 58.8
AL7G13790 Arabidopsis lyrata HOM05D007198 ORTHO05D008969 8.9e-61 237.7 224 57.1
Ciclev10026429m.g Citrus clementina HOM05D007198 ORTHO05D008969 8.9e-61 237.7 223 60.1
AUR62003873 Chenopodium quinoa HOM05D007198 ORTHO05D008969 1.2e-60 237.3 228 59.2
Migut.H00436 Erythranthe guttata HOM05D007198 ORTHO05D008969 1.5e-60 236.9 217 60.4
Sc16g0004690 Simmondsia chinensis HOM05D007198 ORTHO05D008969 1.5e-60 236.9 221 59.3
Carub.0007s0322 Capsella rubella HOM05D007198 ORTHO05D008969 4.4e-60 235.3 203 61.1
Atru.BG.94.p Acer truncatum HOM05D007198 ORTHO05D008969 5.8e-60 235.0 200 66.0
Thhalv10026229m.g Eutrema salsugineum HOM05D007198 ORTHO05D008969 5.8e-60 235.0 226 58.0
Sp7g34740 Schrenkiella parvula HOM05D007198 ORTHO05D008969 7.6e-60 234.6 219 58.0
DCAR_010899 Daucus carota HOM05D007198 ORTHO05D008969 2.2e-59 233.0 215 58.6
AT4G37020 Arabidopsis thaliana HOM05D007198 ORTHO05D008969 3.7e-59 232.3 226 57.1
Lsat_1_v5_gn_4_166740 Lactuca sativa HOM05D007198 ORTHO05D008969 6.4e-59 231.5 225 56.4
MBI02_g02990_MAGBIO Magnolia biondii HOM05D007198 ORTHO05D008969 6.4e-59 231.5 189 65.1
CARHR245490 Cardamine hirsuta HOM05D007198 ORTHO05D008969 1.4e-58 230.3 223 56.5
AUR62001938 Chenopodium quinoa HOM05D000362 ORTHO05D008969 1.9e-58 229.9 227 57.7
BcaC01g00428 Brassica carinata HOM05D007198 ORTHO05D008969 2.4e-58 229.6 224 55.8
BcaB03g12356 Brassica carinata HOM05D007198 ORTHO05D008969 1.6e-57 226.9 225 55.6
Peaxi162Scf00450g00621 Petunia axillaris HOM05D007198 ORTHO05D008969 2.1e-57 226.5 225 56.4
Glyma.01G185700 Glycine max HOM05D007198 ORTHO05D008969 2.7e-57 226.1 225 53.3
VMungo1215G1587 Vigna mungo HOM05D007198 ORTHO05D008969 7.8e-57 224.6 205 57.1
Phvul.002G019200 Phaseolus vulgaris HOM05D007198 ORTHO05D008969 1.0e-56 224.2 205 56.1
Solyc02g090750.4 Solanum lycopersicum HOM05D007198 ORTHO05D008969 1.3e-56 223.8 220 58.2
CDE04G0918 Ceratophyllum demersum HOM05D007198 ORTHO05D008969 3.0e-56 222.6 225 53.3
TPR.G21270 Trifolium pratense HOM05D007198 ORTHO05D008969 5.1e-56 221.9 229 54.1
Medtr5g017490 Medicago truncatula HOM05D007198 ORTHO05D008969 1.5e-55 220.3 228 53.1
Sopen02g035380 Solanum pennellii HOM05D007198 ORTHO05D008969 2.5e-55 219.5 215 58.1
SGA_v2.0_scaffold15G07292 Striga asiatica HOM05D007198 ORTHO05D008969 2.5e-55 219.5 211 58.8
EL10Ac6g15754 Beta vulgaris HOM05D007198 ORTHO05D008969 4.3e-55 218.8 215 57.2
Aa31LG6G13950 Aethionema arabicum HOM05D007198 ORTHO05D008969 9.6e-55 217.6 238 50.8
BraA08t34210Z Brassica rapa HOM05D007198 ORTHO05D008969 1.6e-54 216.9 198 56.1
Duzib264G0904 Durio zibethinus HOM05D007198 ORTHO05D008969 2.1e-54 216.5 225 56.4
ATR0753G086 Amborella trichopoda HOM05D007198 ORTHO05D008969 4.0e-53 212.2 207 57.0
Lj2g0004070 Lotus japonicus HOM05D007198 ORTHO05D008969 4.0e-53 212.2 225 52.9
Zm00001eb223810 Zea mays HOM05D007198 ORTHO05D008969 1.2e-52 210.7 215 55.8
Os10g0388900 Oryza sativa ssp. japonica HOM05D007198 ORTHO05D008969 2.0e-52 209.9 225 55.1
CAN.G836.78 Capsicum annuum HOM05D007198 ORTHO05D008969 4.4e-52 208.8 221 53.8
BolC3t20215H Brassica oleracea HOM05D007198 ORTHO05D008969 5.8e-52 208.4 224 51.3
MELO3C007557.2 Cucumis melo HOM05D007198 ORTHO05D008969 2.4e-50 203.0 179 62.6
Lalb_Chr09g0323151 Lupinus albus HOM05D007198 ORTHO05D008969 4.2e-50 202.2 203 54.2
arahy.Tifrunner.gnm1.ann1.VZ1EEZ Arachis hypogaea HOM05D007198 ORTHO05D008969 4.6e-49 198.7 204 53.9
Psat2g167000 Pisum sativum HOM05D007198 ORTHO05D008969 1.0e-48 197.6 190 55.3
Cpa.g.sc55.159 Carica papaya HOM05D007198 ORTHO05D008969 2.3e-48 196.4 163 62.6
Thecc.01G054900 Theobroma cacao HOM05D007198 ORTHO05D008969 3.0e-48 196.1 203 55.7
arahy.Tifrunner.gnm1.ann1.ETA9G6 Arachis hypogaea HOM05D007198 ORTHO05D008969 6.6e-48 194.9 211 50.2
Nitab4.5_0001034g0170 Nicotiana tabacum HOM05D007198 ORTHO05D008969 8.7e-48 194.5 213 55.4
FAN23G1494 Fragaria x ananassa HOM05D007198 ORTHO05D008969 1.1e-45 187.6 192 56.2
Hund16328 Selenicereus undatus HOM05D007198 ORTHO05D008969 2.3e-40 169.9 174 56.3
Ca_24774_v3 Cicer arietinum L. HOM05D007198 ORTHO05D008969 1.9e-39 166.8 191 48.2
MD10G1272600 Malus domestica HOM05D007198 ORTHO05D008969 5.3e-37 158.7 142 61.3
MD14G1074900 Malus domestica HOM05D007198 ORTHO05D008969 5.8e-36 155.2 143 60.1
Lj4A144T46 Lonicera japonica HOM05D007198 ORTHO05D008969 3.8e-35 152.5 145 57.2
Pp3c12_24960 Physcomitrium patens HOM05D007198 ORTHO05D008969 3.8e-35 152.5 236 41.1
Nitab4.5_0002016g0040 Nicotiana tabacum HOM05D007198 ORTHO05D008969 3.2e-34 149.4 161 52.2
Mapoly0001s0095 Marchantia polymorpha HOM05D007198 ORTHO05D008969 3.5e-33 146.0 217 41.9
Glyma.11G056400 Glycine max HOM05D007198 ORTHO05D008969 1.9e-31 140.2 204 43.6
SMO146G0205 Selaginella moellendorffii HOM05D007198 ORTHO05D008969 6.2e-30 135.2 199 39.7
PGSC0003DMG402015781 Solanum tuberosum HOM05D007198 ORTHO05D008969 1.4e-29 134.0 88 78.4
Oeu024300.1 Olea europaea HOM05D007198 ORTHO05D008969 6.5e-27 125.2 130 50.8
C03p79670 Brassica napus HOM05D001349 ORTHO05D008727 7.9e-25 118.2 110 55.5
A08p22530 Brassica napus HOM05D001349 ORTHO05D008727 5.1e-24 115.5 110 54.5
unitig_899.g14658 Utricularia gibba HOM05D007198 ORTHO05D008969 1.1e-23 114.4 196 38.3
Actinidia03790 Actinidia chinensis HOM05D007198 ORTHO05D008969 2.0e-20 103.6 122 49.2
vmacro17948 Vaccinium macrocarpon HOM05D007198 ORTHO05D008969 3.3e-15 86.3 87 57.5
Ah.03g144920 Amaranthus hybridus HOM05D007198 ORTHO05D008969 4.8e-14 82.4 81 56.8
SEGI_34131 Sequoiadendron giganteum HOM05D007198 ORTHO05D008969 6.3e-14 82.0 133 38.3
CBR_g37151 Chara braunii HOM05D007198 ORTHO05D008969 9.0e-13 78.2 170 30.6
Ah.03g144890 Amaranthus hybridus HOM05D007198 ORTHO05D008969 2.2e-11 73.6 92 47.8
Hund16330 Selenicereus undatus HOM05D007198 ORTHO05D008969 2.2e-11 73.6 47 74.5
Cre01.g037900 Chlamydomonas reinhardtii HOM05D007198 ORTHO05D008969 3.8e-11 72.8 227 25.1
MD07G1022300 Malus domestica HOM05D007198 ORTHO05D008969 1.2e-09 67.8 48 66.7
RcHm_v2.0_Chr3g0472951 Rosa chinensis HOM05D007198 ORTHO05D008969 1.0e-08 64.7 57 56.1
MD17G1282900 Malus domestica HOM05D007198 ORTHO05D008969 3.9e-08 62.8 49 63.3
FvH4_6g49900 Fragaria vesca HOM05D000250 ORTHO05D000625 2.8e-06 56.6 206 24.8
FAN09G0778 Fragaria x ananassa HOM05D000250 ORTHO05D000625 2.8e-06 56.6 206 24.8
Aqoxy1G01483 Aquilegia oxysepala HOM05D000250 ORTHO05D000625 4.8e-06 55.8 206 23.3
Lalb_Chr15g0083881 Lupinus albus HOM05D000250 ORTHO05D000625 6.3e-06 55.5 206 24.3
Lalb_Chr18g0052211 Lupinus albus HOM05D000250 ORTHO05D000625 6.3e-06 55.5 206 24.3
C02p45650 Brassica napus HOM05D027276 ORTHO05D024192 8.2e-06 55.1 34 79.4
Glyma.09G052500 Glycine max HOM05D000250 ORTHO05D000625 8.2e-06 55.1 206 24.3
Glyma.15G158800 Glycine max HOM05D000250 ORTHO05D000625 8.2e-06 55.1 206 24.3
Phvul.009G241200 Phaseolus vulgaris HOM05D000250 ORTHO05D000625 8.2e-06 55.1 206 24.3
VMungo1309G1877 Vigna mungo HOM05D000250 ORTHO05D000625 8.2e-06 55.1 206 24.3


User provided reference genes

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