Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G042000 Populus trichocarpa HOM05D008581 ORTHO05D009966 6.1e-55 217.2 109 100.0
Sabra07G0037300 Salix brachista HOM05D008581 ORTHO05D009966 4.0e-38 161.4 110 74.5
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 9.7e-37 156.8 109 74.3
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 1.0e-17 93.6 118 47.5
Manes.12G100000 Manihot esculenta HOM05D008581 ORTHO05D009966 1.3e-17 93.2 121 47.9
Dinv39871 Davidia involucrata HOM05D008581 ORTHO05D009966 1.5e-16 89.7 121 47.9
Ciclev10027209m.g Citrus clementina HOM05D008581 ORTHO05D009966 2.8e-15 85.5 120 48.3
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 2.8e-15 85.5 116 49.1
Atru.chr3.367 Acer truncatum HOM05D008581 ORTHO05D009966 4.7e-15 84.7 120 44.2
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 8.0e-15 84.0 118 47.5
QL06p042132 Quercus lobata HOM05D008581 ORTHO05D009966 1.0e-14 83.6 118 43.2
Atru.chr3.365 Acer truncatum HOM05D008581 ORTHO05D009966 2.3e-14 82.4 124 45.2
QL06p042091 Quercus lobata HOM05D008581 ORTHO05D009966 5.2e-14 81.3 118 42.4
Lj7C64T2 Lonicera japonica HOM05D008581 ORTHO05D009966 6.8e-14 80.9 118 44.1
QL06p042046 Quercus lobata HOM05D008581 ORTHO05D009966 6.8e-14 80.9 118 42.4
Hma1.2p1_0200F.1_g086080 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 8.9e-14 80.5 124 46.0
Peaxi162Scf00916g00007 Petunia axillaris HOM05D012691 ORTHO05D009966 9.8e-13 77.0 118 40.7
Eucgr.I00950 Eucalyptus grandis HOM05D022674 ORTHO05D009966 1.7e-12 76.3 125 42.4
Hma1.2p1_1415F.1_g282020 Hydrangea macrophylla HOM05D008581 ORTHO05D009966 2.4e-11 72.4 126 41.3
Gohir.A12G070300 Gossypium hirsutum HOM05D013202 ORTHO05D009966 3.2e-11 72.0 115 44.3
Lj7C67G2 Lonicera japonica HOM05D008581 ORTHO05D009966 4.1e-11 71.6 115 40.0
Rhsim10G0119400 Rhododendron simsii HOM05D008581 ORTHO05D009966 1.6e-10 69.7 129 39.5
Duzib264G0703 Durio zibethinus HOM05D008581 ORTHO05D009966 2.0e-10 69.3 120 40.8
Duzib264G0396 Durio zibethinus HOM05D013202 ORTHO05D009966 2.7e-10 68.9 111 41.4
COL.COLO4_11388 Corchorus olitorius HOM05D008581 ORTHO05D009966 4.6e-10 68.2 117 42.7
Gohir.D12G088501 Gossypium hirsutum HOM05D013202 ORTHO05D009966 7.8e-10 67.4 115 44.3
Psat4g087360 Pisum sativum HOM05D008581 ORTHO05D011864 1.0e-09 67.0 112 38.4
Gohir.D03G020800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 2.3e-09 65.9 111 45.0
Gorai.003G022000 Gossypium raimondii HOM05D013202 ORTHO05D009966 2.3e-09 65.9 111 45.0
Lj7C67T3 Lonicera japonica HOM05D008581 ORTHO05D009966 2.3e-09 65.9 113 37.2
Gorai.008G074700 Gossypium raimondii HOM05D013202 ORTHO05D009966 3.0e-09 65.5 112 43.8
Nitab4.5_0000310g0110 Nicotiana tabacum HOM05D012691 ORTHO05D009966 3.9e-09 65.1 122 34.4
Lj7C67T5 Lonicera japonica HOM05D008581 ORTHO05D009966 5.0e-09 64.7 122 37.7
Oeu050767.1 Olea europaea HOM05D028002 ORTHO05D009966 5.0e-09 64.7 105 37.1
Gohir.A02G159800 Gossypium hirsutum HOM05D013202 ORTHO05D009966 6.6e-09 64.3 111 43.2
Gorai.003G022200 Gossypium raimondii HOM05D013202 ORTHO05D009966 6.6e-09 64.3 111 44.1
Gohir.A02G159700 Gossypium hirsutum HOM05D013202 ORTHO05D009966 8.6e-09 63.9 111 38.7
Nitab4.5_0013032g0010 Nicotiana tabacum HOM05D012691 ORTHO05D009966 8.6e-09 63.9 126 38.1
CiPaw.01G020300 Carya illinoinensis HOM05D015383 ORTHO05D009966 1.1e-08 63.5 106 38.7
Nitab4.5_0000033g0450 Nicotiana tabacum HOM05D012691 ORTHO05D009966 1.1e-08 63.5 124 35.5
Nitab4.5_0001064g0010 Nicotiana tabacum HOM05D012691 ORTHO05D009966 1.1e-08 63.5 124 36.3
CiPaw.01G020500 Carya illinoinensis HOM05D015383 ORTHO05D009966 1.5e-08 63.2 125 38.4
CiPaw.01G021000 Carya illinoinensis HOM05D015383 ORTHO05D009966 1.9e-08 62.8 116 40.5
Ca_21178_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 2.5e-08 62.4 122 37.7
Ca_22185_v3 Cicer arietinum L. HOM05D008581 ORTHO05D009966 2.5e-08 62.4 122 37.7
DCAR_025723 Daucus carota HOM05D008581 ORTHO05D009966 2.5e-08 62.4 120 39.2
TPR.G745 Trifolium pratense HOM05D008581 ORTHO05D009966 3.3e-08 62.0 123 40.7
MSTRG.2893 Avicennia marina HOM05D008581 ORTHO05D009966 5.6e-08 61.2 113 37.2
Gorai.003G022300 Gossypium raimondii HOM05D013202 ORTHO05D009966 5.6e-08 61.2 111 36.9
Lj7C64T0 Lonicera japonica HOM05D008581 ORTHO05D009966 7.3e-08 60.8 110 40.0
Eucgr.I00949 Eucalyptus grandis HOM05D022674 ORTHO05D009966 2.1e-07 59.3 125 37.6
Manes.13G126300 Manihot esculenta HOM05D007434 ORTHO05D009541 2.1e-07 59.3 110 40.0
PGSC0003DMG400040657 Solanum tuberosum HOM05D012691 ORTHO05D017744 2.1e-07 59.3 105 37.1
CsaV3_6G043150 Cucumis sativus L. HOM05D007434 ORTHO05D009541 2.8e-07 58.9 121 35.5
Oeu050765.1 Olea europaea HOM05D028002 ORTHO05D009966 4.7e-07 58.2 108 37.0
Gohir.D03G021000 Gossypium hirsutum HOM05D013202 ORTHO05D009966 6.2e-07 57.8 109 38.5
FAN23G2206 Fragaria x ananassa HOM05D007434 ORTHO05D009541 8.0e-07 57.4 99 40.4
Lalb_Chr05g0213241 Lupinus albus HOM05D008581 ORTHO05D011864 8.0e-07 57.4 116 39.7
Nn5g30206 Nelumbo nucifera HOM05D062348 ORTHO05D009966 8.0e-07 57.4 109 33.0
Phvul.002G020000 Phaseolus vulgaris HOM05D008581 ORTHO05D011864 8.0e-07 57.4 115 40.0
Glyma.11G057100 Glycine max HOM05D008581 ORTHO05D011864 1.1e-06 57.0 111 38.7
Ciclev10027212m.g Citrus clementina HOM05D007434 ORTHO05D009541 1.4e-06 56.6 111 36.9
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 1.4e-06 56.6 116 38.8
ClCG01G016730 Citrullus lanatus HOM05D007434 ORTHO05D009541 1.8e-06 56.2 118 36.4
Gorai.003G022400 Gossypium raimondii HOM05D013202 ORTHO05D009966 1.8e-06 56.2 109 38.5
QL06p042049 Quercus lobata HOM05D008581 ORTHO05D009966 1.8e-06 56.2 112 38.4
Lalb_Chr16g0378261 Lupinus albus HOM05D008581 ORTHO05D011864 3.1e-06 55.5 114 38.6
Lalb_Chr16g0378441 Lupinus albus HOM05D008581 ORTHO05D011864 3.1e-06 55.5 114 38.6
Sed0015330 Sechium edule HOM05D007434 ORTHO05D009541 3.1e-06 55.5 99 38.4
FvH4_1g15760 Fragaria vesca HOM05D018300 ORTHO05D020671 4.0e-06 55.1 107 39.3
Manes.12G100300 Manihot esculenta HOM05D007434 ORTHO05D009541 5.2e-06 54.7 99 41.4
Solyc03g044580.1 Solanum lycopersicum HOM05D012691 ORTHO05D009966 5.2e-06 54.7 118 36.4
COL.COLO4_11385 Corchorus olitorius HOM05D007434 ORTHO05D009541 6.8e-06 54.3 112 37.5
FAN28G0198 Fragaria x ananassa HOM05D007434 ORTHO05D009541 6.8e-06 54.3 99 40.4
CiPaw.01G020900 Carya illinoinensis HOM05D015383 ORTHO05D009966 8.9e-06 53.9 117 35.0
Eucgr.F04318 Eucalyptus grandis HOM05D022674 ORTHO05D009966 8.9e-06 53.9 125 36.8
Eucgr.I00948 Eucalyptus grandis HOM05D022674 ORTHO05D009966 8.9e-06 53.9 125 36.0
FvH4_1g15740 Fragaria vesca HOM05D007434 ORTHO05D009541 8.9e-06 53.9 99 40.4
Glyma.01G185100 Glycine max HOM05D008581 ORTHO05D009966 8.9e-06 53.9 111 38.7
QL06p042147 Quercus lobata HOM05D008581 ORTHO05D009966 8.9e-06 53.9 114 37.7


User provided reference genes

Program Settings