Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G041500 Populus trichocarpa HOM05D007434 ORTHO05D009541 2.4e-47 191.8 94 100.0
Ciclev10027106m.g Citrus clementina HOM05D007434 ORTHO05D009541 7.9e-19 97.1 94 57.4
QL06p042177 Quercus lobata HOM05D007434 ORTHO05D009541 4.3e-17 91.3 93 51.6
CiPaw.01G021200 Carya illinoinensis HOM05D007434 ORTHO05D009541 1.4e-15 86.3 93 49.5
Prupe.7G136000 Prunus persica HOM05D007434 ORTHO05D009541 1.2e-14 83.2 100 49.0
Gohir.A02G159900 Gossypium hirsutum HOM05D007434 ORTHO05D009541 7.7e-14 80.5 95 52.6
Gohir.D03G020700 Gossypium hirsutum HOM05D007434 ORTHO05D009541 7.7e-14 80.5 95 52.6
Gorai.003G021800 Gossypium raimondii HOM05D007434 ORTHO05D009541 7.7e-14 80.5 95 52.6
Nn5g30204 Nelumbo nucifera HOM05D007434 ORTHO05D009541 1.7e-13 79.3 96 44.8
FvH4_1g15740 Fragaria vesca HOM05D007434 ORTHO05D009541 3.8e-13 78.2 102 50.0
Glyma.11G057300 Glycine max HOM05D007434 ORTHO05D009541 8.5e-13 77.0 94 50.0
CiPaw.02G009300 Carya illinoinensis HOM05D007434 ORTHO05D009541 2.5e-12 75.5 97 44.3
FAN28G0198 Fragaria x ananassa HOM05D007434 ORTHO05D009541 3.2e-12 75.1 102 49.0
FAN23G2206 Fragaria x ananassa HOM05D007434 ORTHO05D009541 4.2e-12 74.7 103 47.6
Lj2g0026149 Lotus japonicus HOM05D007434 ORTHO05D009541 5.5e-12 74.3 97 49.5
Atru.chr3.392 Acer truncatum HOM05D007434 ORTHO05D009541 9.4e-12 73.6 91 47.3
Nn1g05850 Nelumbo nucifera HOM05D007434 ORTHO05D009541 9.4e-12 73.6 96 41.7
ClCG01G016730 Citrullus lanatus HOM05D007434 ORTHO05D009541 3.6e-11 71.6 105 41.0
Glyma.01G184900 Glycine max HOM05D007434 ORTHO05D009541 4.6e-11 71.2 94 47.9
MD15G1281800 Malus domestica HOM05D007434 ORTHO05D009541 4.6e-11 71.2 87 42.5
CsaV3_6G043150 Cucumis sativus L. HOM05D007434 ORTHO05D009541 1.0e-10 70.1 95 42.1
Manes.12G100200 Manihot esculenta HOM05D007434 ORTHO05D009541 1.8e-10 69.3 92 46.7
Atru.chr3.394 Acer truncatum HOM05D007434 ORTHO05D009541 2.3e-10 68.9 92 43.5
Manes.13G126400 Manihot esculenta HOM05D007434 ORTHO05D009541 2.3e-10 68.9 91 42.9
Phvul.002G020200 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 2.3e-10 68.9 87 43.7
MELO3C007552.2 Cucumis melo HOM05D007434 ORTHO05D009541 3.0e-10 68.6 95 43.2
Sed0015330 Sechium edule HOM05D007434 ORTHO05D009541 3.9e-10 68.2 98 44.9
Haze_15425 Corylus avellana HOM05D007434 ORTHO05D009541 1.5e-09 66.2 72 55.6
Lalb_Chr05g0213231 Lupinus albus HOM05D007434 ORTHO05D009541 2.0e-09 65.9 94 41.5
Gohir.A11G190650 Gossypium hirsutum HOM05D007434 ORTHO05D009541 3.3e-09 65.1 87 44.8
Medtr5g017710 Medicago truncatula HOM05D007434 ORTHO05D009541 3.3e-09 65.1 94 44.7
Gohir.D11G197450 Gossypium hirsutum HOM05D007434 ORTHO05D009541 4.3e-09 64.7 95 45.3
TPR.G21269 Trifolium pratense HOM05D007434 ORTHO05D009541 2.2e-08 62.4 87 46.0
Lalb_Chr05g0226641 Lupinus albus HOM05D007434 ORTHO05D009541 4.8e-08 61.2 94 39.4
Manes.13G126300 Manihot esculenta HOM05D007434 ORTHO05D009541 6.3e-08 60.8 89 42.7
Dinv29971 Davidia involucrata HOM05D008581 ORTHO05D009541 1.1e-07 60.1 71 49.3
Lj4g0021906 Lotus japonicus HOM05D007434 ORTHO05D009541 1.1e-07 60.1 94 43.6
Atru.chr3.391 Acer truncatum HOM05D007434 ORTHO05D009541 2.4e-07 58.9 92 40.2
COL.COLO4_11386 Corchorus olitorius HOM05D007434 ORTHO05D009541 2.4e-07 58.9 97 40.2
arahy.Tifrunner.gnm1.ann1.T0173K Arachis hypogaea HOM05D007434 ORTHO05D009541 4.1e-07 58.2 89 42.7
CDE06G1671 Ceratophyllum demersum HOM05D051429 ORTHO05D009541 5.3e-07 57.8 94 41.5
Ciclev10027212m.g Citrus clementina HOM05D007434 ORTHO05D009541 6.9e-07 57.4 94 39.4
Sed0003827 Sechium edule HOM05D007434 ORTHO05D009541 6.9e-07 57.4 87 42.5
Lalb_Chr09g0323081 Lupinus albus HOM05D007434 ORTHO05D009541 9.1e-07 57.0 94 39.4
Aqoxy6G01381 Aquilegia oxysepala HOM05D007434 ORTHO05D009541 1.5e-06 56.2 80 38.8
Migut.H00450 Erythranthe guttata HOM05D018578 ORTHO05D020597 2.0e-06 55.8 95 33.7
Manes.12G100300 Manihot esculenta HOM05D007434 ORTHO05D009541 2.0e-06 55.8 93 43.0
Nn1g05851 Nelumbo nucifera HOM05D007434 ORTHO05D009541 2.0e-06 55.8 91 40.7
Cpa.g.sc55.176 Carica papaya HOM05D007434 ORTHO05D009541 3.4e-06 55.1 90 38.9
DCAR_010906 Daucus carota HOM05D007434 ORTHO05D009541 4.5e-06 54.7 94 37.2
Lalb_Chr09g0333721 Lupinus albus HOM05D007434 ORTHO05D009541 4.5e-06 54.7 94 36.2
Aqoxy6G01382 Aquilegia oxysepala HOM05D007434 ORTHO05D009541 5.9e-06 54.3 88 37.5
Phvul.003G245500 Phaseolus vulgaris HOM05D007434 ORTHO05D009541 7.7e-06 53.9 89 38.2


User provided reference genes

Program Settings