Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 5.6e-85 317.8 185 100.0
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 1.5e-69 266.5 192 83.3
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 1.5e-61 240.0 185 74.6
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 1.5e-50 203.4 179 64.8
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 1.2e-47 193.7 187 62.6
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 1.6e-47 193.4 185 61.1
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 2.1e-47 193.0 179 61.5
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 2.3e-46 189.5 186 60.2
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 3.9e-46 188.7 185 61.1
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 3.9e-46 188.7 181 60.2
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 1.5e-45 186.8 185 61.1
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 9.7e-45 184.1 180 59.4
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 1.1e-43 180.6 179 59.2
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 1.1e-43 180.6 185 58.9
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 1.4e-43 180.3 185 57.3
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 1.4e-43 180.3 189 59.8
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 3.1e-43 179.1 180 59.4
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 5.3e-43 178.3 186 58.1
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 5.3e-43 178.3 184 58.2
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 1.2e-42 177.2 185 55.1
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 3.4e-42 175.6 184 57.1
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 1.3e-41 173.7 184 58.2
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 1.7e-41 173.3 186 55.9
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 5.0e-41 171.8 184 56.5
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 6.5e-41 171.4 184 57.1
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 6.5e-41 171.4 184 59.2
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 1.1e-40 170.6 179 58.7
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 1.4e-40 170.2 186 57.0
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.5e-40 169.5 186 55.9
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 7.2e-40 167.9 184 58.7
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 9.4e-40 167.5 179 56.4
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 2.1e-39 166.4 179 57.5
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 4.6e-39 165.2 181 56.4
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 4.6e-39 165.2 186 52.7
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 3.0e-38 162.5 186 51.6
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 8.8e-38 161.0 190 52.6
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 1.5e-37 160.2 181 53.6
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 2.0e-37 159.8 185 57.8
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 2.6e-37 159.5 185 53.5
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 2.6e-37 159.5 181 53.0
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 3.3e-37 159.1 253 42.7
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 4.4e-37 158.7 189 55.6
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 5.7e-37 158.3 186 49.5
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 9.7e-37 157.5 185 51.9
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 9.7e-37 157.5 190 51.6
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 9.7e-37 157.5 185 54.1
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 2.8e-36 156.0 187 55.6
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 3.7e-36 155.6 186 50.5
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 6.3e-36 154.8 185 53.0
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 6.3e-36 154.8 185 49.7
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 4.1e-35 152.1 183 53.0
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 5.3e-35 151.8 185 49.7
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 6.9e-35 151.4 180 52.8
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 9.1e-35 151.0 186 53.8
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 1.2e-34 150.6 181 53.0
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.0e-34 149.8 185 51.9
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 2.6e-34 149.4 190 53.2
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 3.4e-34 149.1 186 48.9
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 7.7e-34 147.9 180 52.2
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 2.2e-33 146.4 192 48.4
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 3.8e-33 145.6 180 51.1
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 1.4e-30 137.1 184 48.9
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 1.8e-30 136.7 277 38.6
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 2.3e-30 136.3 186 47.8
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 1.5e-29 133.7 190 46.8
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 2.0e-29 133.3 183 50.8
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 3.3e-29 132.5 186 48.4
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 4.4e-29 132.1 143 58.0
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 7.4e-29 131.3 178 47.8
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 3.7e-28 129.0 98 71.4
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 3.7e-28 129.0 176 44.3
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 1.8e-27 126.7 147 53.7
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 1.8e-27 126.7 187 47.1
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 2.4e-27 126.3 190 44.2
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 4.1e-27 125.6 182 46.2
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 5.3e-27 125.2 180 44.4
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 1.2e-26 124.0 186 47.3
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 2.6e-26 122.9 179 45.8
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 2.6e-26 122.9 179 43.6
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 2.6e-26 122.9 179 45.3
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 5.9e-26 121.7 221 41.2
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 1.0e-25 120.9 183 47.0
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 1.3e-25 120.6 172 44.2
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 1.7e-25 120.2 172 46.5
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 2.2e-25 119.8 179 46.9
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 8.5e-25 117.9 179 47.5
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 8.5e-25 117.9 179 47.5
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 8.5e-25 117.9 200 43.5
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 1.5e-24 117.1 172 47.7
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 1.5e-24 117.1 180 44.4
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 7.2e-24 114.8 232 39.7
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 9.4e-24 114.4 159 45.9
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 1.6e-23 113.6 161 46.0
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 6.1e-23 111.7 145 51.0
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 8.0e-23 111.3 98 62.2
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 1.0e-22 110.9 98 61.2
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 1.8e-22 110.2 130 54.6
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 2.6e-21 106.3 181 41.4
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 5.7e-21 105.1 186 41.9
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 7.5e-21 104.8 172 45.9
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 1.3e-20 104.0 172 41.3
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 4.8e-20 102.1 172 40.7
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 4.8e-20 102.1 172 40.7
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 8.2e-20 101.3 146 46.6
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 1.0e-17 94.4 140 46.4
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 1.0e-17 94.4 140 46.4
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 1.1e-16 90.9 172 42.4
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 1.9e-16 90.1 183 39.9
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 1.2e-13 80.9 79 54.4
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 3.4e-13 79.3 71 57.7
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 2.2e-12 76.6 79 50.6
Haze_15170 Corylus avellana HOM05D006676 ORTHO05D008394 4.8e-12 75.5 191 33.0
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 5.4e-11 72.0 131 42.0
ATR0800G049 Amborella trichopoda HOM05D006676 ORTHO05D008394 2.3e-09 66.6 84 45.2
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 1.2e-07 60.8 58 48.3
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 4.0e-06 55.8 180 31.7


User provided reference genes

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