Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 1.1e-60 236.9 168 100.0
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 1.4e-53 213.4 168 92.9
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 2.7e-30 136.0 170 68.8
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 1.0e-29 134.0 172 70.3
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 1.4e-29 133.7 169 70.4
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 2.3e-29 132.9 172 65.7
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 2.6e-28 129.4 168 70.2
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 9.8e-28 127.5 169 66.9
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 3.1e-26 122.5 168 64.9
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 4.1e-26 122.1 169 59.8
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 9.1e-26 120.9 173 65.3
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 9.1e-26 120.9 173 65.3
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 9.1e-26 120.9 169 57.4
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 2.0e-25 119.8 169 62.1
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 2.0e-25 119.8 169 58.0
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 7.7e-25 117.9 170 65.3
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 7.7e-25 117.9 168 62.5
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.0e-24 117.5 168 62.5
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 1.3e-24 117.1 159 57.2
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 1.7e-24 116.7 173 68.8
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 1.7e-24 116.7 159 63.5
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 3.8e-24 115.5 172 66.3
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 5.0e-24 115.2 162 62.3
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.1e-23 114.0 169 66.3
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 5.5e-23 111.7 169 65.1
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 7.2e-23 111.3 170 61.8
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 9.4e-23 110.9 160 57.5
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 9.4e-23 110.9 170 64.1
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 1.6e-22 110.2 164 66.5
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 3.6e-22 109.0 166 67.5
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 3.6e-22 109.0 172 65.7
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 4.7e-22 108.6 169 65.1
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 4.7e-22 108.6 169 65.1
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 4.7e-22 108.6 170 63.5
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.4e-21 107.1 169 63.9
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 3.0e-21 105.9 171 60.2
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 3.0e-21 105.9 171 60.2
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 3.0e-21 105.9 143 62.2
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 5.2e-21 105.1 160 63.1
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 6.8e-21 104.8 159 57.9
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 8.8e-21 104.4 170 62.9
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 1.2e-20 104.0 168 58.3
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 2.0e-20 103.2 216 54.6
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 2.0e-20 103.2 168 63.1
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 3.4e-20 102.4 171 60.8
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 3.4e-20 102.4 172 60.5
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 3.4e-20 102.4 166 50.6
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 3.4e-20 102.4 168 63.1
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 3.4e-20 102.4 170 62.4
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 5.7e-20 101.7 132 70.5
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 7.5e-20 101.3 168 65.5
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 7.5e-20 101.3 154 63.6
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 9.8e-20 100.9 154 64.9
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 9.8e-20 100.9 154 63.0
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 1.3e-19 100.5 168 56.5
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 1.7e-19 100.1 148 62.8
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 1.7e-19 100.1 152 63.8
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 2.2e-19 99.8 156 64.1
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 2.8e-19 99.4 165 63.6
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 2.8e-19 99.4 170 60.0
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 3.7e-19 99.0 154 62.3
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 3.7e-19 99.0 154 62.3
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 4.9e-19 98.6 139 66.9
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 4.9e-19 98.6 156 65.4
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 8.3e-19 97.8 154 63.0
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 8.3e-19 97.8 154 63.0
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 1.4e-18 97.1 172 57.0
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 1.4e-18 97.1 136 72.8
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 1.4e-18 97.1 172 65.1
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 1.8e-18 96.7 172 62.2
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 2.4e-18 96.3 164 63.4
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 3.1e-18 95.9 133 64.7
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 5.4e-18 95.1 166 64.5
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 9.2e-18 94.4 123 63.4
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 1.6e-17 93.6 168 51.2
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 2.0e-17 93.2 166 53.6
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 4.5e-17 92.0 159 64.2
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 1.3e-16 90.5 131 68.7
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 1.7e-16 90.1 129 56.6
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 2.9e-16 89.4 155 60.0
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 5.0e-16 88.6 156 59.6
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 4.3e-15 85.5 147 58.5
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 7.3e-15 84.7 154 61.0
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 7.3e-15 84.7 160 55.0
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.2e-14 84.0 165 55.2
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.2e-14 84.0 154 57.8
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 2.8e-14 82.8 154 57.1
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 4.7e-14 82.0 163 55.2
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 6.8e-13 78.2 129 65.9
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 3.4e-12 75.9 157 58.6
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 7.5e-12 74.7 137 43.1
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 2.2e-11 73.2 168 41.7
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 3.2e-10 69.3 145 58.6
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.6e-09 67.0 100 68.0
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 1.6e-09 67.0 177 47.5
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 3.5e-09 65.9 107 68.2
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 1.3e-08 63.9 117 56.4
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 1.7e-08 63.5 173 46.8
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 1.7e-08 63.5 165 47.9
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 3.3e-07 59.3 135 46.7


User provided reference genes

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