Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 6.1e-59 231.1 163 100.0
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 2.2e-48 196.1 164 87.8
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 1.1e-39 167.2 162 75.9
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 5.3e-39 164.9 163 74.8
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 7.0e-39 164.5 163 73.6
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 1.2e-38 163.7 164 75.0
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 1.6e-38 163.3 164 74.4
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 2.0e-38 162.9 165 77.0
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 3.5e-38 162.2 163 73.6
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 7.7e-38 161.0 163 73.6
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 2.9e-37 159.1 163 73.0
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 1.9e-36 156.4 163 74.8
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 2.5e-36 156.0 165 74.5
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 2.5e-36 156.0 165 73.9
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 1.2e-35 153.7 163 71.8
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 1.6e-35 153.3 164 73.2
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 2.7e-35 152.5 167 73.7
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 3.6e-35 152.1 167 71.3
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 8.0e-35 151.0 164 75.6
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 4.0e-34 148.7 163 71.8
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 5.2e-34 148.3 163 79.1
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 8.8e-34 147.5 164 72.0
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 1.5e-33 146.7 164 71.3
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 7.5e-33 144.4 166 70.5
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 7.5e-33 144.4 166 70.5
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 7.5e-33 144.4 166 69.9
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 7.5e-33 144.4 163 69.9
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 9.8e-33 144.1 164 75.0
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 9.8e-33 144.1 163 68.7
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 1.3e-32 143.7 166 71.7
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 1.7e-32 143.3 163 69.9
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 3.7e-32 142.1 164 68.9
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 3.7e-32 142.1 165 71.5
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 4.8e-32 141.7 132 81.1
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 6.3e-32 141.4 166 70.5
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 8.3e-32 141.0 167 68.9
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 1.1e-31 140.6 166 69.9
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 1.1e-31 140.6 163 69.3
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 1.4e-31 140.2 165 69.7
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 1.8e-31 139.8 166 69.9
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 1.8e-31 139.8 162 71.0
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 1.8e-31 139.8 168 68.5
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 1.8e-31 139.8 165 73.9
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 2.4e-31 139.4 163 72.4
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 2.4e-31 139.4 167 71.9
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 2.4e-31 139.4 166 71.7
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 4.1e-31 138.7 167 71.9
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 1.2e-30 137.1 163 70.6
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 1.6e-30 136.7 163 71.2
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 2.0e-30 136.3 163 70.6
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 2.7e-30 136.0 162 69.8
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.7e-30 136.0 127 85.8
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 3.5e-30 135.6 164 71.3
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 4.5e-30 135.2 167 70.1
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 4.5e-30 135.2 164 67.1
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 5.9e-30 134.8 163 73.0
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 7.7e-30 134.4 164 69.5
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 1.0e-29 134.0 167 68.9
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 1.0e-29 134.0 167 69.5
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 1.0e-29 134.0 167 68.9
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 2.9e-29 132.5 167 70.1
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 6.6e-29 131.3 135 81.5
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 1.1e-28 130.6 127 69.3
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 1.1e-28 130.6 115 86.1
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 1.1e-28 130.6 115 86.1
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 1.5e-28 130.2 167 66.5
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 1.9e-28 129.8 156 75.0
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 1.9e-28 129.8 163 66.3
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 4.2e-28 128.6 168 65.5
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 4.2e-28 128.6 127 85.0
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 5.5e-28 128.3 169 66.3
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 9.5e-28 127.5 167 65.9
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 1.6e-27 126.7 163 65.6
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 3.6e-27 125.6 165 57.6
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 6.1e-27 124.8 129 76.7
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 1.0e-26 124.0 94 66.0
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 1.0e-26 124.0 138 73.9
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 2.3e-26 122.9 156 73.1
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 5.2e-26 121.7 127 59.8
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 5.2e-26 121.7 153 71.2
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 1.5e-25 120.2 96 63.5
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 1.5e-25 120.2 124 75.0
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 4.4e-25 118.6 169 63.3
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 7.0e-23 111.3 159 65.4
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 1.2e-22 110.5 153 64.7
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 5.9e-22 108.2 158 64.6
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 2.9e-21 105.9 119 74.8
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 3.9e-21 105.5 113 76.1
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 4.3e-20 102.1 98 61.2
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 5.6e-20 101.7 169 63.3
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 1.2e-19 100.5 117 74.4
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 1.4e-18 97.1 152 63.2
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 3.1e-18 95.9 115 46.1
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 4.0e-18 95.5 148 66.2
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.9e-16 89.4 130 43.8
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 5.4e-15 85.1 126 69.8
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 1.7e-13 80.1 89 68.5
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 3.9e-13 79.0 120 63.3
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 2.5e-12 76.3 147 61.9
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.4e-10 70.5 119 37.8
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 1.2e-09 67.4 53 62.3
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 1.4e-07 60.5 55 54.5


User provided reference genes

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