Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 1.0e-243 846.3 414 100.0
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 1.6e-212 742.7 441 84.4
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 1.9e-181 639.4 397 75.3
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 1.6e-180 636.3 398 74.6
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 1.3e-179 633.3 399 74.7
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 1.5e-178 629.8 398 74.4
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 4.3e-178 628.2 397 76.6
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 7.4e-178 627.5 416 71.2
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 1.3e-177 626.7 399 74.7
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 7.7e-175 617.5 398 72.4
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 3.6e-172 608.6 414 70.0
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 3.6e-172 608.6 399 73.4
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 3.6e-172 608.6 420 70.0
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.2e-169 599.4 411 69.3
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 3.4e-167 592.0 397 70.5
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 1.3e-166 590.1 414 68.1
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 5.0e-166 588.2 403 70.7
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 1.1e-165 587.0 402 68.4
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 1.4e-165 586.6 401 70.1
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 5.5e-165 584.7 401 68.1
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.2e-164 583.6 401 69.6
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 1.2e-164 583.6 418 66.7
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 1.6e-164 583.2 404 67.8
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 2.1e-164 582.8 383 69.5
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 2.7e-164 582.4 401 67.8
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 2.7e-164 582.4 401 69.6
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 2.7e-164 582.4 408 68.6
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 4.4e-162 575.1 421 66.3
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 5.7e-162 574.7 418 67.0
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 5.7e-162 574.7 388 69.1
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 9.7e-162 573.9 400 67.5
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 1.3e-161 573.5 458 64.4
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 2.2e-161 572.8 400 67.5
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 2.2e-161 572.8 388 70.4
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 3.7e-161 572.0 390 68.7
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 4.8e-161 571.6 404 68.3
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 8.2e-161 570.9 410 66.1
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 1.1e-160 570.5 368 71.5
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 1.8e-160 569.7 412 66.0
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 4.1e-160 568.5 358 75.7
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 2.6e-159 565.8 414 62.8
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 4.5e-159 565.1 415 65.3
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 4.5e-159 565.1 404 65.8
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 5.0e-158 561.6 389 68.1
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.5e-157 560.1 417 64.0
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 2.5e-157 559.3 398 68.3
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 1.2e-156 557.0 385 67.3
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 1.2e-156 557.0 404 65.8
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.2e-156 557.0 413 63.7
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.2e-156 557.0 386 67.6
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 1.2e-156 557.0 415 65.1
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 2.7e-156 555.8 385 67.0
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 2.7e-156 555.8 415 64.8
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 3.6e-156 555.4 396 65.2
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 4.7e-156 555.1 393 65.6
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 8.0e-156 554.3 406 64.0
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.0e-155 553.9 385 66.8
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 1.8e-155 553.1 386 67.1
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 4.0e-155 552.0 396 64.6
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 4.0e-155 552.0 392 64.5
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 1.3e-153 547.0 425 62.6
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.4e-152 542.7 405 65.4
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 4.1e-152 542.0 397 65.5
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 5.3e-152 541.6 394 65.7
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 9.1e-152 540.8 410 62.4
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 2.2e-150 536.2 412 62.4
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 5.0e-150 535.0 398 65.3
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 6.5e-150 534.6 421 64.4
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 9.4e-149 530.8 412 61.9
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.7e-148 529.3 362 67.1
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 2.3e-147 526.2 397 63.0
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.6e-143 513.5 396 61.6
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 5.5e-141 505.0 394 63.2
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 1.6e-140 503.4 459 55.8
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 1.8e-136 490.0 399 60.2
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 1.2e-135 487.3 350 66.0
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 3.5e-135 485.7 405 59.8
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.3e-134 483.8 435 57.5
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 9.5e-133 477.6 369 61.8
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 2.6e-130 469.5 350 62.6
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 9.8e-130 467.6 426 54.5
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.1e-123 446.0 405 58.0
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 8.9e-123 444.5 336 60.7
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 2.7e-119 433.0 350 57.4
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 4.6e-119 432.2 331 63.1
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 3.3e-117 426.0 297 66.7
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 3.6e-116 422.5 288 69.4
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 5.2e-115 418.7 358 58.1
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 2.4e-112 409.8 396 52.0
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 4.7e-100 369.0 254 69.3
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 7.8e-95 351.7 213 71.8
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.4e-91 340.1 251 63.3
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 1.3e-89 334.3 334 47.9
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 1.7e-89 334.0 428 46.3
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 8.4e-89 331.6 414 42.5
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 5.4e-88 328.9 251 62.2
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 1.8e-83 313.9 414 40.8
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 2.4e-80 303.5 384 45.3
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.2e-79 301.2 372 42.2
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 8.1e-76 288.5 366 41.8
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 6.9e-75 285.4 395 42.0
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 7.9e-71 271.9 164 73.8
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 8.7e-70 268.5 209 61.2
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 3.6e-63 246.5 192 60.9
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 5.1e-62 242.7 230 55.2
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 1.1e-59 235.0 221 54.3
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 6.9e-59 232.3 208 53.8
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 2.9e-49 200.3 294 40.5
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.1e-48 198.4 137 66.4
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 5.5e-48 196.1 295 42.0
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 2.1e-47 194.1 129 69.8
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.1e-43 181.8 121 67.8
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 1.2e-39 168.3 97 76.3
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 2.4e-35 154.1 107 63.6
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 4.4e-29 133.3 136 45.6
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 1.4e-27 128.3 107 58.9
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 5.5e-24 116.3 129 48.8
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 2.5e-16 90.9 79 59.5
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 4.3e-08 63.5 42 73.8


User provided reference genes

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