Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 3.2e-85 318.5 179 100.0
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 8.4e-78 293.9 179 86.0
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 2.3e-51 206.1 178 65.2
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 9.7e-50 200.7 176 62.5
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 1.4e-48 196.8 137 75.2
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 2.0e-47 193.0 191 59.7
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.9e-46 189.1 180 60.0
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 6.5e-46 188.0 180 59.4
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 8.5e-46 187.6 180 59.4
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 1.1e-45 187.2 125 77.6
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 2.5e-45 186.0 179 59.8
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 2.5e-45 186.0 179 61.5
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 3.2e-45 185.7 181 61.3
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 4.2e-45 185.3 179 60.9
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 2.1e-44 183.0 98 89.8
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 2.7e-44 182.6 147 68.7
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 3.6e-44 182.2 100 88.0
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 3.6e-44 182.2 181 59.7
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 1.8e-43 179.9 97 89.7
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 3.9e-43 178.7 97 87.6
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 5.1e-43 178.3 135 68.1
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 8.8e-43 177.6 154 64.9
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 2.5e-42 176.0 100 85.0
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 3.3e-42 175.6 100 84.0
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 4.3e-42 175.3 184 62.0
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 5.7e-42 174.9 145 65.5
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 7.4e-42 174.5 156 62.8
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 1.3e-41 173.7 100 83.0
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 1.3e-41 173.7 98 83.7
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 3.7e-41 172.2 98 82.7
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 4.8e-41 171.8 135 68.1
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 4.8e-41 171.8 100 81.0
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 1.1e-40 170.6 100 82.0
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 3.1e-40 169.1 100 79.0
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 4.1e-40 168.7 132 65.9
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 6.9e-40 167.9 98 81.6
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 1.2e-39 167.2 134 66.4
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 3.4e-39 165.6 98 79.6
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 1.0e-38 164.1 166 57.2
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 1.3e-38 163.7 146 60.3
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 2.2e-38 162.9 180 51.7
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 2.2e-38 162.9 145 62.1
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 3.8e-38 162.2 146 59.6
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 8.5e-38 161.0 142 59.2
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 1.4e-37 160.2 99 78.8
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 3.2e-37 159.1 99 74.7
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 9.4e-37 157.5 148 62.8
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 4.7e-36 155.2 99 76.8
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 4.7e-36 155.2 126 65.1
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 6.1e-36 154.8 99 75.8
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 1.0e-35 154.1 139 64.7
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 1.4e-35 153.7 179 51.4
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 1.8e-35 153.3 182 51.1
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 1.8e-35 153.3 182 51.1
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 1.8e-35 153.3 182 51.1
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 1.8e-35 153.3 179 51.4
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 1.8e-35 153.3 98 75.5
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 3.0e-35 152.5 179 50.3
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 3.9e-35 152.1 98 74.5
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 6.7e-35 151.4 169 53.3
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 8.8e-35 151.0 179 49.2
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 1.5e-34 150.2 98 70.4
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 2.0e-34 149.8 97 73.2
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 2.6e-34 149.4 179 49.2
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 3.3e-34 149.1 179 49.2
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 7.4e-34 147.9 181 48.1
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 9.7e-34 147.5 155 56.1
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 1.3e-33 147.1 98 69.4
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 2.8e-33 146.0 179 46.9
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 8.2e-33 144.4 130 71.5
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 8.2e-33 144.4 180 51.1
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 8.2e-33 144.4 180 51.1
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 1.1e-32 144.1 140 56.4
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 1.8e-32 143.3 100 69.0
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 1.5e-31 140.2 83 84.3
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 2.0e-31 139.8 99 70.7
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 3.5e-31 139.0 89 74.2
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 7.7e-31 137.9 100 65.0
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 1.3e-30 137.1 100 64.0
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 2.9e-30 136.0 164 50.6
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 5.0e-30 135.2 135 54.1
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 1.9e-29 133.3 156 48.7
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 1.6e-28 130.2 122 63.1
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 8.0e-28 127.9 83 78.3
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 5.2e-27 125.2 98 67.3
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 1.1e-26 124.0 148 54.1
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 3.3e-26 122.5 98 60.2
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 4.4e-26 122.1 98 62.2
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 2.9e-22 109.4 66 74.2
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 6.5e-22 108.2 65 83.1
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 8.5e-22 107.8 135 48.1
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 3.2e-21 105.9 67 77.6
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 2.3e-19 99.8 120 49.2
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 3.0e-19 99.4 110 55.5
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 5.2e-19 98.6 97 48.5
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 1.3e-17 94.0 64 70.3
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 8.3e-17 91.3 145 47.6
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 2.4e-16 89.7 117 47.0
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 2.0e-15 86.7 65 64.6
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 2.0e-15 86.7 87 46.0
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 2.0e-15 86.7 94 52.1
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 2.7e-15 86.3 84 51.2
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 1.7e-14 83.6 93 54.8
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 3.2e-13 79.3 102 48.0
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 8.0e-12 74.7 90 43.3
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 1.8e-08 63.5 80 42.5


User provided reference genes

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