Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G274600 Populus trichocarpa HOM05D014278 ORTHO05D009846 7.1e-224 780.4 431 100.0
Potri.018G005500 Populus trichocarpa HOM05D014278 ORTHO05D009846 1.7e-140 503.4 443 72.0
Sabra18G0011200 Salix brachista HOM05D014278 ORTHO05D009846 2.6e-133 479.6 439 69.9
Sabra18G0013600 Salix brachista HOM05D014278 ORTHO05D009846 3.4e-133 479.2 439 69.9
Manes.16G135600 Manihot esculenta HOM05D014278 ORTHO05D009846 1.3e-44 184.9 448 41.7
Duzib168G1354 Durio zibethinus HOM05D019025 ORTHO05D009846 4.3e-35 153.3 424 36.8
Duzib187G1602 Durio zibethinus HOM05D019025 ORTHO05D009846 2.6e-32 144.1 432 36.3
CiPaw.07G212500 Carya illinoinensis HOM05D013263 ORTHO05D009846 2.5e-27 127.5 395 36.7
Prupe.1G460100 Prunus persica HOM05D013263 ORTHO05D009846 1.6e-26 124.8 427 37.9
QL12p025151 Quercus lobata HOM05D013263 ORTHO05D009846 4.9e-23 113.2 399 37.6
TWI32G0873 Tripterygium wilfordii HOM05D013263 ORTHO05D009846 6.4e-23 112.8 481 32.6
MD15G1107800 Malus domestica HOM05D013263 ORTHO05D009846 9.2e-22 109.0 463 32.8
THA.LOC104803324 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 6.0e-21 106.3 434 32.0
TWI34G1417 Tripterygium wilfordii HOM05D014278 ORTHO05D009846 7.8e-21 105.9 431 34.3
Cfa013269 Carpinus fangiana HOM05D014278 ORTHO05D009846 3.0e-20 104.0 468 32.7
Ciclev10010613m.g Citrus clementina HOM05D014278 ORTHO05D009846 1.1e-19 102.1 457 32.6
RcHm_v2.0_Chr6g0304991 Rosa chinensis HOM05D013263 ORTHO05D009846 4.3e-19 100.1 455 32.1
MD08G1128300 Malus domestica HOM05D013263 ORTHO05D009846 1.6e-18 98.2 469 31.6
Thecc.09G007200 Theobroma cacao HOM05D019025 ORTHO05D009846 4.9e-15 86.7 420 30.2
FAN27G1111 Fragaria x ananassa HOM05D013263 ORTHO05D009846 5.4e-14 83.2 448 31.9
FvH4_2g36751 Fragaria vesca HOM05D013263 ORTHO05D009846 9.2e-14 82.4 443 31.8
FAN15G3280 Fragaria x ananassa HOM05D013263 ORTHO05D009846 9.2e-14 82.4 443 32.1
Aqoxy7G02994 Aquilegia oxysepala HOM05D021794 ORTHO05D009846 2.1e-13 81.3 461 30.4
Rhsim07G0169800 Rhododendron simsii HOM05D033576 ORTHO05D009846 3.5e-13 80.5 449 33.0
MELO3C011188.2 Cucumis melo HOM05D019337 ORTHO05D009846 1.0e-12 79.0 487 30.2
Sed0003431 Sechium edule HOM05D019337 ORTHO05D009846 1.0e-12 79.0 456 31.6
Sed0008235 Sechium edule HOM05D019337 ORTHO05D009846 1.7e-12 78.2 451 30.4
Oeu018569.1 Olea europaea HOM05D009522 ORTHO05D009846 3.9e-12 77.0 417 31.2
PSO063G5953 Papaver somniferum HOM05D021794 ORTHO05D016335 3.9e-12 77.0 483 29.4
PGR031G3799 Punica granatum HOM05D009522 ORTHO05D009846 5.1e-12 76.6 420 27.9
Cc00_g05330 Coffea canephora HOM05D009522 ORTHO05D009846 6.6e-12 76.3 451 29.0
THA.LOC104814972 Tarenaya hassleriana HOM05D008799 ORTHO05D010975 1.5e-11 75.1 436 31.0
FAN20G1345 Fragaria x ananassa HOM05D013263 ORTHO05D009846 7.3e-11 72.8 445 30.6
Solyc12g096400.2 Solanum lycopersicum HOM05D009522 ORTHO05D009846 7.3e-11 72.8 469 29.9
Haze_21737 Corylus avellana HOM05D014278 ORTHO05D009846 3.6e-10 70.5 471 28.9
PGSC0003DMG400029280 Solanum tuberosum HOM05D009522 ORTHO05D009846 3.6e-10 70.5 458 30.1
EL10Ac2g03757 Beta vulgaris HOM05D016385 ORTHO05D018262 6.2e-10 69.7 443 29.3
COL.COLO4_19033 Corchorus olitorius HOM05D019025 ORTHO05D009846 8.1e-10 69.3 440 28.9
Lj1g0027444 Lotus japonicus HOM05D013197 ORTHO05D009846 1.4e-09 68.6 485 29.1
Ah.10g033870 Amaranthus hybridus HOM05D016385 ORTHO05D018262 2.4e-09 67.8 441 28.1
MBI14_g19445_MAGBIO Magnolia biondii HOM05D021794 ORTHO05D009846 4.0e-09 67.0 445 28.3
CAN.G566.64 Capsicum annuum HOM05D009522 ORTHO05D009846 1.2e-08 65.5 455 30.3
CsaV3_2G031380 Cucumis sativus L. HOM05D019337 ORTHO05D009846 1.5e-08 65.1 495 28.5
SGA_v2.0_scaffold27G11671 Striga asiatica HOM05D009522 ORTHO05D009846 2.6e-08 64.3 431 29.2
Atru.chr7.2642 Acer truncatum HOM05D019337 ORTHO05D009846 7.6e-08 62.8 466 29.8
CAN.G908.7 Capsicum annuum HOM05D009522 ORTHO05D009846 7.6e-08 62.8 466 29.4
Ca_15666_v3 Cicer arietinum L. HOM05D013197 ORTHO05D009846 7.6e-08 62.8 382 28.5
Gorai.009G067700 Gossypium raimondii HOM05D019025 ORTHO05D009846 7.6e-08 62.8 521 26.9
Dinv21138 Davidia involucrata HOM05D003021 ORTHO05D009846 9.9e-08 62.4 47 74.5
ClCG08G012670 Citrullus lanatus HOM05D019337 ORTHO05D009846 1.7e-07 61.6 477 29.6
Nitab4.5_0010092g0020 Nicotiana tabacum HOM05D009522 ORTHO05D009846 2.9e-07 60.8 469 28.8
ECA240G3142 Erigeron canadensis HOM05D009522 ORTHO05D009846 3.8e-07 60.5 50 66.0
Thhalv10004239m.g Eutrema salsugineum HOM05D008799 ORTHO05D010975 3.8e-07 60.5 409 30.1
Glyma.06G076700 Glycine max HOM05D013197 ORTHO05D012811 3.8e-07 60.5 442 29.4
AUR62020598 Chenopodium quinoa HOM05D016385 ORTHO05D018262 4.9e-07 60.1 468 28.8
CARHR202650 Cardamine hirsuta HOM05D008799 ORTHO05D010975 8.4e-07 59.3 448 29.7
Glyma.14G134700 Glycine max HOM05D016469 ORTHO05D012811 8.4e-07 59.3 442 28.7
PSO170G4909 Papaver somniferum HOM05D021794 ORTHO05D016335 1.4e-06 58.5 485 28.2
Cc07_g03910 Coffea canephora HOM05D003021 ORTHO05D002235 3.2e-06 57.4 58 56.9
TWI60G1604 Tripterygium wilfordii HOM05D003021 ORTHO05D002235 3.2e-06 57.4 51 60.8
CANSAT64G0795 Cannabis sativa HOM05D003021 ORTHO05D002235 4.2e-06 57.0 51 62.7
AUR62042563 Chenopodium quinoa HOM05D003021 ORTHO05D002235 5.4e-06 56.6 43 62.8
Gohir.D05G066900 Gossypium hirsutum HOM05D019025 ORTHO05D009846 5.4e-06 56.6 508 25.4
Oeu000855.1 Olea europaea HOM05D003021 ORTHO05D002235 5.4e-06 56.6 52 61.5
Hma1.2p1_1813F.1_g303770 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 7.1e-06 56.2 59 52.5
Hma1.2p1_3044F.1_g332070 Hydrangea macrophylla HOM05D003021 ORTHO05D002235 7.1e-06 56.2 59 52.5
Lalb_Chr23g0269121 Lupinus albus HOM05D013197 ORTHO05D012811 7.1e-06 56.2 486 29.4


User provided reference genes

Program Settings