Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G274133 Populus trichocarpa HOM05D007251 ORTHO05D009266 1.4e-96 356.3 177 100.0
Potri.006G273400 Populus trichocarpa HOM05D007251 ORTHO05D009266 3.7e-94 348.2 176 97.2
Sabra06G0211800 Salix brachista HOM05D007251 ORTHO05D009266 1.8e-80 302.8 202 78.7
Thecc.09G007500 Theobroma cacao HOM05D007251 ORTHO05D009266 8.9e-64 247.3 168 71.4
Cpa.g.sc23.18 Carica papaya HOM05D007251 ORTHO05D009266 2.4e-61 239.2 169 69.8
Gorai.009G067600 Gossypium raimondii HOM05D007251 ORTHO05D009266 2.7e-60 235.7 167 68.3
Cfa023054 Carpinus fangiana HOM05D007251 ORTHO05D009266 1.3e-59 233.4 167 71.3
Gohir.D05G066800 Gossypium hirsutum HOM05D007251 ORTHO05D009266 2.3e-59 232.6 167 67.7
QL12p025168 Quercus lobata HOM05D007251 ORTHO05D009266 6.6e-59 231.1 168 69.0
TAR626G1006 Trochodendron aralioides HOM05D007251 ORTHO05D009266 3.1e-56 222.2 167 65.3
Dinv18148 Davidia involucrata HOM05D007251 ORTHO05D009266 2.0e-55 219.5 154 70.1
Eucgr.C02018 Eucalyptus grandis HOM05D007251 ORTHO05D009266 1.3e-54 216.9 154 71.4
Prupe.1G459800 Prunus persica HOM05D007251 ORTHO05D009266 3.7e-54 215.3 175 62.3
CiPaw.08G020100 Carya illinoinensis HOM05D007251 ORTHO05D009266 8.3e-54 214.2 167 64.1
MD08G1128000 Malus domestica HOM05D007251 ORTHO05D009266 1.1e-53 213.8 154 68.8
TWI34G2010 Tripterygium wilfordii HOM05D007251 ORTHO05D009266 2.4e-53 212.6 153 69.9
Glyma.14G134800 Glycine max HOM05D007251 ORTHO05D009266 1.2e-52 210.3 157 65.0
Gohir.A05G064200 Gossypium hirsutum HOM05D007251 ORTHO05D009266 1.6e-52 209.9 208 53.4
Nn8g40494 Nelumbo nucifera HOM05D007251 ORTHO05D009266 3.5e-52 208.8 155 63.2
Lj7C750G16 Lonicera japonica HOM05D007251 ORTHO05D009266 7.8e-52 207.6 154 67.5
RcHm_v2.0_Chr6g0305021 Rosa chinensis HOM05D007251 ORTHO05D009266 1.3e-51 206.8 155 65.2
Medtr1g009650 Medicago truncatula HOM05D007251 ORTHO05D009266 1.7e-51 206.5 170 60.0
Hund03293 Selenicereus undatus HOM05D007251 ORTHO05D009266 3.9e-51 205.3 154 64.3
FvH4_2g36670 Fragaria vesca HOM05D007251 ORTHO05D009266 5.1e-51 204.9 154 64.9
Phvul.001G059500 Phaseolus vulgaris HOM05D007251 ORTHO05D009266 8.6e-51 204.1 157 62.4
VMungo0647G2138 Vigna mungo HOM05D007251 ORTHO05D009266 1.9e-50 203.0 157 63.1
FAN15G3149 Fragaria x ananassa HOM05D007251 ORTHO05D009266 2.5e-50 202.6 153 64.7
arahy.Tifrunner.gnm1.ann1.ULFK5V Arachis hypogaea HOM05D007251 ORTHO05D009266 3.3e-50 202.2 151 64.9
FAN27G2253 Fragaria x ananassa HOM05D007251 ORTHO05D009266 3.3e-50 202.2 154 64.3
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 5.6e-50 201.4 154 64.3
Psat6g032880 Pisum sativum HOM05D007251 ORTHO05D009266 5.6e-50 201.4 168 59.5
DCAR_003023 Daucus carota HOM05D007251 ORTHO05D009266 2.1e-49 199.5 162 60.5
Nitab4.5_0000502g0130 Nicotiana tabacum HOM05D007251 ORTHO05D009266 3.6e-49 198.7 151 64.9
Glyma.17G197900 Glycine max HOM05D007251 ORTHO05D009266 4.7e-49 198.4 157 61.1
BcaB05g21499 Brassica carinata HOM05D007251 ORTHO05D009266 3.1e-48 195.7 159 59.7
Thhalv10013072m.g Eutrema salsugineum HOM05D007251 ORTHO05D009266 3.1e-48 195.7 159 62.9
Sp6g32780 Schrenkiella parvula HOM05D007251 ORTHO05D009266 3.1e-48 195.7 159 62.9
arahy.Tifrunner.gnm1.ann1.5WJ9LU Arachis hypogaea HOM05D007251 ORTHO05D009266 4.0e-48 195.3 148 64.9
Lalb_Chr24g0402511 Lupinus albus HOM05D007251 ORTHO05D009266 5.2e-48 194.9 155 60.0
ClCG05G017600 Citrullus lanatus HOM05D007251 ORTHO05D009266 6.8e-48 194.5 168 58.3
A02p00600 Brassica napus HOM05D007251 ORTHO05D009266 8.9e-48 194.1 159 60.4
Carub.0006s0915 Capsella rubella HOM05D007251 ORTHO05D009266 8.9e-48 194.1 159 62.3
CAN.G908.8 Capsicum annuum HOM05D007251 ORTHO05D009266 1.2e-47 193.7 151 63.6
Solyc08g069010.4 Solanum lycopersicum HOM05D007251 ORTHO05D009266 1.2e-47 193.7 151 63.6
BcaC03g13325 Brassica carinata HOM05D007251 ORTHO05D009266 1.5e-47 193.4 159 60.4
C02p04590 Brassica napus HOM05D007251 ORTHO05D009266 1.5e-47 193.4 159 60.4
BolC2t06419H Brassica oleracea HOM05D007251 ORTHO05D009266 1.5e-47 193.4 159 60.4
BraA02t05043Z Brassica rapa HOM05D007251 ORTHO05D009266 1.5e-47 193.4 159 59.7
Sopen08g022660 Solanum pennellii HOM05D007251 ORTHO05D009266 1.5e-47 193.4 151 63.6
Aqoxy7G03087 Aquilegia oxysepala HOM05D007251 ORTHO05D009266 2.0e-47 193.0 154 61.0
CSS0035408 Camellia sinensis var. sinensis HOM05D007251 ORTHO05D009266 4.4e-47 191.8 154 63.0
AUR62009072 Chenopodium quinoa HOM05D007251 ORTHO05D009266 4.4e-47 191.8 152 62.5
SalBow8G5364 Salvia bowleyana HOM05D007251 ORTHO05D009266 7.6e-47 191.0 151 60.9
MELO3C003624.2 Cucumis melo HOM05D007251 ORTHO05D009266 1.3e-46 190.3 157 61.8
Nitab4.5_0002023g0010 Nicotiana tabacum HOM05D007251 ORTHO05D009266 1.3e-46 190.3 151 62.3
TPR.G12085 Trifolium pratense HOM05D007251 ORTHO05D009266 1.3e-46 190.3 155 58.7
Aa31LG3G16450 Aethionema arabicum HOM05D007251 ORTHO05D009266 2.2e-46 189.5 151 62.3
ATR0580G362 Amborella trichopoda HOM05D007251 ORTHO05D009266 2.9e-46 189.1 157 56.7
Peaxi162Scf00288g00912 Petunia axillaris HOM05D007251 ORTHO05D009266 3.8e-46 188.7 151 61.6
GSVIVG01035517001 Vitis vinifera HOM05D007251 ORTHO05D009266 4.9e-46 188.3 115 76.5
AT5G10690 Arabidopsis thaliana HOM05D007251 ORTHO05D009266 8.4e-46 187.6 159 61.6
AUR62020596 Chenopodium quinoa HOM05D007251 ORTHO05D009266 1.1e-45 187.2 166 59.6
SalBow8G3910 Salvia bowleyana HOM05D007251 ORTHO05D009266 7.1e-45 184.5 151 59.6
CARHR202630 Cardamine hirsuta HOM05D007251 ORTHO05D009266 1.2e-44 183.7 159 60.4
CANSAT56G3637 Cannabis sativa HOM05D007251 ORTHO05D009266 6.0e-44 181.4 165 55.2
Migut.E01424 Erythranthe guttata HOM05D007251 ORTHO05D009266 1.7e-43 179.9 151 57.0
Ca_12854_v3 Cicer arietinum L. HOM05D007251 ORTHO05D009266 3.0e-43 179.1 217 46.1
Ah.11g043880 Amaranthus hybridus HOM05D007251 ORTHO05D009266 3.9e-43 178.7 152 57.9
Atru.BG.4.p Acer truncatum HOM05D007251 ORTHO05D009266 9.6e-42 174.1 121 70.2
Duzib168G1420 Durio zibethinus HOM05D007251 ORTHO05D009266 4.8e-41 171.8 107 74.8
SGA_v2.0_scaffold121G33030 Striga asiatica HOM05D007251 ORTHO05D009266 8.1e-41 171.0 151 57.0
MBI16_g41809_MAGBIO Magnolia biondii HOM05D007251 ORTHO05D009266 1.4e-40 170.2 134 60.4
PSO063G0176 Papaver somniferum HOM05D007251 ORTHO05D009266 5.3e-40 168.3 164 53.0
PSO782G5553 Papaver somniferum HOM05D007251 ORTHO05D009266 6.9e-40 167.9 164 53.0
Os09g0431600 Oryza sativa ssp. japonica HOM05D007251 ORTHO05D009266 7.6e-39 164.5 150 50.7
EL10Ac2g03759 Beta vulgaris HOM05D007251 ORTHO05D009266 2.9e-38 162.5 142 56.3
Zm00001eb099850 Zea mays HOM05D007251 ORTHO05D009266 1.0e-35 154.1 144 47.2
Sabra06G0212100 Salix brachista HOM05D007251 ORTHO05D009266 2.8e-33 146.0 110 70.9
COL.COLO4_19030 Corchorus olitorius HOM05D007251 ORTHO05D009266 9.6e-26 120.9 86 70.9
Mapoly0043s0002 Marchantia polymorpha HOM05D007251 ORTHO05D009266 1.6e-25 120.2 153 39.9
Haze_21751 Corylus avellana HOM05D007251 ORTHO05D009266 1.0e-22 110.9 83 67.5
CDE05G1868 Ceratophyllum demersum HOM05D007251 ORTHO05D009266 1.3e-22 110.5 86 60.5
Oeu019281.1 Olea europaea HOM05D007251 ORTHO05D009266 3.8e-22 109.0 92 59.8
Ciclev10010499m.g Citrus clementina HOM05D007251 ORTHO05D009266 6.5e-22 108.2 143 49.7
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 3.2e-13 79.3 123 35.8
CBR_g20311 Chara braunii HOM05D007251 ORTHO05D009266 6.1e-12 75.1 110 35.5
SMO137G0044 Selaginella moellendorffii HOM05D007251 ORTHO05D009266 2.3e-11 73.2 121 30.6
Oeu042188.1 Olea europaea HOM05D007251 ORTHO05D009266 3.3e-10 69.3 60 55.0
Actinidia22254 Actinidia chinensis HOM05D007251 ORTHO05D009266 8.5e-06 54.7 48 56.2


User provided reference genes

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