Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 2.0e-164 582.4 309 100.0
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 5.8e-119 431.4 306 74.2
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 4.3e-114 415.2 303 72.3
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 7.3e-114 414.5 304 71.4
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 1.6e-113 413.3 304 71.7
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 4.8e-113 411.8 303 71.9
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 4.0e-112 408.7 306 71.2
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 6.9e-112 407.9 307 70.7
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 1.5e-111 406.8 306 71.2
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 3.4e-111 405.6 306 70.3
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 7.6e-111 404.4 306 70.9
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 7.6e-111 404.4 306 69.3
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 1.4e-109 400.2 307 70.4
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 2.1e-108 396.4 307 69.7
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 2.7e-108 396.0 306 69.9
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 3.5e-108 395.6 307 69.1
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 1.8e-107 393.3 297 71.7
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 1.5e-106 390.2 306 68.6
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 8.1e-105 384.4 295 70.5
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 1.1e-104 384.0 306 66.7
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 2.4e-104 382.9 294 70.4
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 6.9e-104 381.3 307 65.5
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 2.6e-103 379.4 298 69.8
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 1.3e-102 377.1 294 69.0
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 2.2e-102 376.3 302 66.9
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 2.2e-102 376.3 306 65.4
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 3.8e-102 375.6 307 68.1
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 1.1e-101 374.0 307 65.1
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 1.6e-100 370.2 307 67.4
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 1.3e-99 367.1 307 63.8
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 3.9e-99 365.5 307 65.5
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 5.7e-98 361.7 306 65.7
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 1.3e-97 360.5 301 64.8
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 1.3e-97 360.5 274 71.9
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 6.2e-97 358.2 282 69.5
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 1.7e-94 350.1 307 64.2
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 2.2e-94 349.7 302 64.2
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 6.5e-94 348.2 297 66.3
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 5.5e-93 345.1 299 65.6
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 2.1e-92 343.2 301 64.5
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 6.1e-92 341.7 272 69.1
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 6.1e-92 341.7 298 65.1
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 7.9e-92 341.3 294 63.3
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 1.0e-91 340.9 307 62.5
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 3.3e-90 335.9 297 63.3
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 3.3e-90 335.9 295 62.7
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 5.7e-90 335.1 216 79.2
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 2.3e-83 313.2 298 61.1
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 2.0e-82 310.1 315 54.9
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 4.1e-80 302.4 306 54.9
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 1.0e-78 297.7 315 55.2
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 3.6e-76 289.3 304 55.3
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 8.8e-75 284.6 241 65.6
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 1.4e-72 277.3 247 62.8
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 1.3e-62 244.2 234 61.1
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 3.7e-57 226.1 183 65.6
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 5.4e-56 222.2 206 58.7
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 4.1e-40 169.5 275 40.7
Solyc08g069220.2 Solanum lycopersicum HOM05D008288 ORTHO05D010469 5.4e-24 115.9 270 34.8
Sopen08g022840 Solanum pennellii HOM05D008288 ORTHO05D010469 6.8e-19 99.0 66 72.7
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 3.8e-17 93.2 301 27.6
Pp3c26_8290 Physcomitrium patens HOM05D006338 ORTHO05D007946 2.0e-10 70.9 287 26.1
Eucgr.H02615 Eucalyptus grandis HOM05D000215 ORTHO05D003454 1.7e-09 67.8 274 26.3
Duzib235G1018 Durio zibethinus HOM05D000215 ORTHO05D007108 1.9e-08 64.3 202 29.7
Glyma.20G220600 Glycine max HOM05D000215 ORTHO05D002282 1.9e-08 64.3 276 26.8
SHI02135 Sapria himalayana HOM05D000215 ORTHO05D007108 1.9e-08 64.3 201 29.4
Rhsim12G0121400 Rhododendron simsii HOM05D000215 ORTHO05D003454 4.2e-08 63.2 274 24.8
Aa31LG1G16780 Aethionema arabicum HOM05D002131 ORTHO05D002141 5.4e-08 62.8 281 27.4
Actinidia13517 Actinidia chinensis HOM05D000215 ORTHO05D003454 7.1e-08 62.4 274 24.5
CANSAT56G1993 Cannabis sativa HOM05D000215 ORTHO05D007108 7.1e-08 62.4 273 27.1
Glyma.15G064800 Glycine max HOM05D000215 ORTHO05D007108 7.1e-08 62.4 241 29.5
Lalb_Chr20g0122541 Lupinus albus HOM05D000215 ORTHO05D007108 7.1e-08 62.4 250 30.0
Migut.L00465 Erythranthe guttata HOM05D001865 ORTHO05D001815 1.2e-07 61.6 281 23.5
Psat7g107360 Pisum sativum HOM05D000215 ORTHO05D007108 1.6e-07 61.2 274 28.5
CSS0025946 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D003454 2.7e-07 60.5 291 24.4
CSS0030448 Camellia sinensis var. sinensis HOM05D000215 ORTHO05D003454 2.7e-07 60.5 291 24.4
Thecc.03G009700 Theobroma cacao HOM05D000215 ORTHO05D003454 2.7e-07 60.5 266 23.7
Glyma.13G249400 Glycine max HOM05D000215 ORTHO05D007108 3.5e-07 60.1 243 29.2
Manes.06G103300 Manihot esculenta HOM05D000215 ORTHO05D003454 3.5e-07 60.1 267 24.3
TPR.G13914 Trifolium pratense HOM05D000215 ORTHO05D007108 3.5e-07 60.1 223 30.0
Actinidia11824 Actinidia chinensis HOM05D000215 ORTHO05D007108 6.0e-07 59.3 255 26.3
Eucgr.B00358 Eucalyptus grandis HOM05D000215 ORTHO05D003454 6.0e-07 59.3 275 24.7
Manes.16G015200 Manihot esculenta HOM05D000215 ORTHO05D007108 6.0e-07 59.3 211 27.5
PGR119G1373 Punica granatum HOM05D000215 ORTHO05D003454 6.0e-07 59.3 275 24.4
Pp3c9_17040 Physcomitrium patens HOM05D000215 ORTHO05D008904 7.8e-07 58.9 266 25.2
Pp3c9_17047 Physcomitrium patens HOM05D000215 ORTHO05D008904 7.8e-07 58.9 266 25.2
Cpa.g.sc69.15 Carica papaya HOM05D000215 ORTHO05D003454 1.3e-06 58.2 292 25.3
THA.LOC104821146 Tarenaya hassleriana HOM05D000215 ORTHO05D002282 1.3e-06 58.2 300 23.7
Manes.17G031300 Manihot esculenta HOM05D000215 ORTHO05D007108 1.7e-06 57.8 222 27.5
COL.COLO4_36974 Corchorus olitorius HOM05D000215 ORTHO05D003454 2.3e-06 57.4 268 24.3
Rhsim13G0164000 Rhododendron simsii HOM05D000215 ORTHO05D007108 2.3e-06 57.4 209 28.7
Sp7g19440 Schrenkiella parvula HOM05D000215 ORTHO05D007108 3.0e-06 57.0 248 27.4
DCAR_026544 Daucus carota HOM05D000215 ORTHO05D003454 3.9e-06 56.6 292 25.0
Aqoxy3G03021 Aquilegia oxysepala HOM05D000215 ORTHO05D003454 5.1e-06 56.2 273 24.5
Duzib268G0442 Durio zibethinus HOM05D000215 ORTHO05D003454 5.1e-06 56.2 285 24.6
Sabra11G0022800 Salix brachista HOM05D000215 ORTHO05D007108 5.1e-06 56.2 279 24.7
AUR62032080 Chenopodium quinoa HOM05D002131 ORTHO05D002141 6.6e-06 55.8 278 25.2
Sabra11G0026300 Salix brachista HOM05D000215 ORTHO05D007108 6.6e-06 55.8 279 24.4
Thecc.02G244100 Theobroma cacao HOM05D000215 ORTHO05D003454 6.6e-06 55.8 272 25.7
CDE10G0830 Ceratophyllum demersum HOM05D000215 ORTHO05D002239 8.7e-06 55.5 258 25.2
Gohir.A06G208700 Gossypium hirsutum HOM05D000215 ORTHO05D007108 8.7e-06 55.5 211 27.0
Gohir.D06G212400 Gossypium hirsutum HOM05D000215 ORTHO05D007108 8.7e-06 55.5 211 27.0
PSO210G4266 Papaver somniferum HOM05D000215 ORTHO05D007108 8.7e-06 55.5 231 28.6
Potri.004G028800 Populus trichocarpa HOM05D000215 ORTHO05D007108 8.7e-06 55.5 211 26.1
VMungo1215G2548 Vigna mungo HOM05D000215 ORTHO05D003454 8.7e-06 55.5 275 22.9


User provided reference genes

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