Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 9.6e-115 416.8 201 100.0
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 1.3e-111 406.4 201 98.5
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 1.4e-100 369.8 206 86.9
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 1.5e-99 366.3 204 88.7
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 3.1e-97 358.6 201 85.6
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 1.0e-95 353.6 201 84.1
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 1.0e-95 353.6 205 84.4
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 2.2e-95 352.4 204 85.3
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 5.0e-95 351.3 201 84.6
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 8.5e-95 350.5 202 86.1
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.9e-94 349.4 206 85.0
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 4.2e-94 348.2 204 83.3
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 7.2e-94 347.4 213 81.2
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 7.2e-94 347.4 201 84.1
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 7.2e-94 347.4 201 84.1
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 2.1e-93 345.9 201 84.1
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 2.1e-93 345.9 202 83.7
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 2.7e-93 345.5 201 83.6
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 4.7e-93 344.7 201 83.6
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 4.7e-93 344.7 201 83.6
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 1.8e-92 342.8 201 83.6
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 3.0e-92 342.0 201 81.1
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 6.7e-92 340.9 201 82.6
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 7.4e-91 337.4 209 80.4
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 2.2e-90 335.9 201 82.6
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 2.4e-89 332.4 201 82.1
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 3.1e-89 332.0 172 91.3
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 4.1e-89 331.6 172 90.7
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 7.0e-89 330.9 202 81.7
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 1.5e-88 329.7 207 79.2
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 2.2e-87 325.9 206 76.7
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 3.8e-87 325.1 214 75.2
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 3.8e-87 325.1 201 79.1
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 5.0e-87 324.7 203 80.3
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 5.0e-87 324.7 197 79.2
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 2.5e-86 322.4 201 77.6
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 2.5e-86 322.4 204 77.5
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 3.2e-86 322.0 203 79.3
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 7.2e-86 320.9 203 76.8
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 9.4e-86 320.5 202 78.2
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 1.6e-85 319.7 201 76.6
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 2.1e-85 319.3 201 77.6
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 2.7e-85 318.9 202 77.7
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 3.6e-85 318.5 201 77.1
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 4.7e-85 318.2 201 77.1
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 4.7e-85 318.2 200 79.5
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 6.1e-85 317.8 168 86.9
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 8.0e-85 317.4 188 79.3
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 8.0e-85 317.4 202 78.7
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 8.0e-85 317.4 206 76.7
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 1.0e-84 317.0 205 74.6
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 1.0e-84 317.0 202 77.2
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 1.4e-84 316.6 203 77.3
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 1.8e-84 316.2 204 77.0
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 1.8e-84 316.2 170 85.3
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 1.8e-84 316.2 202 76.2
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 6.7e-84 314.3 204 77.0
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 6.7e-84 314.3 204 77.0
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 6.7e-84 314.3 204 77.0
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 6.7e-84 314.3 204 77.0
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 8.8e-84 313.9 203 76.8
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.5e-83 313.2 203 75.9
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 1.5e-83 313.2 202 77.2
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 9.7e-83 310.5 225 70.7
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 9.7e-83 310.5 208 76.0
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 9.7e-83 310.5 204 73.5
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.3e-82 310.1 230 70.4
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 1.3e-82 310.1 202 76.7
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 1.7e-82 309.7 171 84.8
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 1.4e-81 306.6 170 84.7
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 4.1e-81 305.1 196 76.0
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 7.0e-81 304.3 206 74.3
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 1.6e-80 303.1 213 72.3
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 2.6e-80 302.4 174 83.9
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.6e-80 302.4 177 81.9
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 7.7e-80 300.8 199 73.9
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 1.2e-77 293.5 166 80.1
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 3.6e-77 292.0 169 81.1
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 8.0e-77 290.8 153 87.6
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 2.3e-76 289.3 213 71.8
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 5.2e-76 288.1 180 80.6
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 6.7e-76 287.7 170 81.2
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 4.4e-75 285.0 172 81.4
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 5.3e-73 278.1 164 81.1
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 2.7e-72 275.8 182 76.9
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 5.9e-72 274.6 176 79.0
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 2.9e-71 272.3 167 74.9
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 8.0e-69 264.2 141 86.5
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 6.8e-68 261.2 137 87.6
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 5.7e-67 258.1 221 63.8
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 7.5e-67 257.7 178 73.6
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 1.0e-63 247.3 163 69.3
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 3.8e-63 245.4 137 83.2
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 1.5e-59 233.4 163 68.1
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 3.7e-58 228.8 111 95.5
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 8.3e-58 227.6 198 57.1
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 1.1e-57 227.3 161 70.8
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 1.8e-57 226.5 152 71.7
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 2.4e-49 199.5 192 59.4
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 5.4e-49 198.4 159 58.5
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 1.2e-27 127.5 140 42.1
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.9e-17 93.6 165 37.6
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 7.6e-11 71.6 133 36.8
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 8.4e-10 68.2 37 78.4
SMO356G0017 Selaginella moellendorffii HOM05D007351 ORTHO05D017832 1.1e-06 57.8 133 37.6
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 1.5e-06 57.4 155 24.5
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 4.3e-06 55.8 132 31.8


User provided reference genes

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