Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 8.2e-155 550.4 297 100.0
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 1.7e-128 463.0 290 88.6
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 1.7e-91 340.1 289 66.4
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.9e-90 336.7 281 66.9
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.2e-89 334.0 279 67.4
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 1.6e-89 333.6 281 66.5
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 1.0e-88 330.9 267 68.2
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 1.4e-82 310.5 281 62.6
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 4.6e-81 305.4 262 67.6
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 7.9e-81 304.7 281 63.7
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 3.0e-80 302.8 282 62.8
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 8.2e-78 294.7 263 65.4
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 2.6e-76 289.7 262 64.5
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 2.6e-76 289.7 259 64.5
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 5.8e-76 288.5 262 64.5
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 2.2e-75 286.6 278 57.9
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 4.9e-75 285.4 255 64.3
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 1.4e-74 283.9 278 57.9
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 1.4e-74 283.9 248 67.3
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 2.5e-74 283.1 279 58.8
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 7.1e-74 281.6 272 59.2
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 7.1e-74 281.6 272 59.2
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 7.1e-74 281.6 279 57.3
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 9.3e-74 281.2 301 55.1
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 2.1e-73 280.0 290 55.5
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 2.7e-73 279.6 289 55.0
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 3.5e-73 279.3 259 62.2
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 1.0e-72 277.7 301 54.8
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 1.0e-72 277.7 279 57.0
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 1.8e-72 276.9 280 57.1
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 1.8e-72 276.9 270 57.8
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 2.3e-72 276.6 291 55.0
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 5.1e-72 275.4 262 61.8
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 1.9e-71 273.5 288 54.9
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 1.9e-71 273.5 278 57.6
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 5.7e-71 271.9 252 63.5
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 5.7e-71 271.9 290 54.1
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 7.4e-71 271.6 294 54.8
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 2.4e-69 266.5 287 54.0
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 9.0e-69 264.6 278 57.9
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 9.0e-69 264.6 313 51.8
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 9.0e-69 264.6 286 54.5
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 1.5e-68 263.8 272 57.0
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 4.2e-66 255.8 268 56.0
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 5.5e-66 255.4 270 53.0
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 7.9e-65 251.5 281 54.1
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.7e-64 248.4 250 56.8
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 4.3e-63 245.7 250 56.8
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 5.7e-63 245.4 268 54.9
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 7.4e-63 245.0 260 56.2
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 2.8e-62 243.0 266 53.8
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 6.3e-62 241.9 222 60.4
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 1.4e-61 240.7 265 55.5
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 3.1e-61 239.6 245 55.1
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 4.1e-61 239.2 265 51.7
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 1.0e-59 234.6 187 70.1
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.0e-59 234.6 227 61.2
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 1.3e-59 234.2 257 54.1
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 8.5e-59 231.5 265 53.6
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 1.2e-57 227.6 256 53.5
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 1.2e-57 227.6 256 53.1
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 1.2e-57 227.6 256 53.5
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 1.8e-56 223.8 259 52.1
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 6.7e-56 221.9 296 49.7
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 2.0e-55 220.3 275 46.9
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 3.3e-55 219.5 247 51.4
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 5.7e-55 218.8 225 56.9
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 1.3e-54 217.6 255 52.5
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 1.8e-53 213.8 227 54.6
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 1.9e-50 203.8 243 50.6
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.2e-50 203.0 221 54.8
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 4.2e-50 202.6 188 61.7
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 4.7e-49 199.1 221 54.3
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 9.7e-47 191.4 221 52.5
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 3.1e-45 186.4 225 49.8
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 5.3e-45 185.7 197 54.8
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 2.2e-43 180.3 202 52.5
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 6.5e-43 178.7 276 41.7
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 4.2e-42 176.0 239 49.4
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 4.2e-42 176.0 346 39.0
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 1.2e-41 174.5 296 41.2
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 2.3e-40 170.2 284 37.7
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 4.1e-37 159.5 281 39.1
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 1.2e-33 147.9 220 46.8
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 4.4e-31 139.4 159 53.5
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 5.7e-31 139.0 145 53.1
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 2.4e-29 133.7 92 79.3
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.2e-28 131.3 258 40.7
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 2.3e-27 127.1 279 33.3
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 2.3e-27 127.1 107 62.6
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 3.7e-22 109.8 136 44.9
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 9.2e-21 105.1 131 50.4
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 2.0e-20 104.0 131 46.6
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 1.7e-14 84.3 88 55.7
Glyma.04G070800 Glycine max HOM05D007522 ORTHO05D009518 6.6e-11 72.4 61 60.7
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 1.1e-10 71.6 72 54.2


User provided reference genes

Program Settings