Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G244600 Populus trichocarpa HOM05D003500 ORTHO05D003919 6.5e-94 347.4 183 100.0
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 3.6e-44 182.2 245 51.4
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 2.1e-39 166.4 245 47.8
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 3.9e-30 135.6 253 42.3
Sabra06G0191500 Salix brachista HOM05D003500 ORTHO05D003919 3.9e-30 135.6 132 66.7
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 1.6e-28 130.2 205 43.9
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 4.5e-26 122.1 258 38.8
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 4.5e-26 122.1 253 39.5
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 3.8e-25 119.0 262 36.6
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 9.3e-24 114.4 264 36.0
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.6e-23 113.6 258 36.8
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 2.7e-23 112.8 264 37.5
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 3.0e-22 109.4 257 36.2
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 1.9e-21 106.7 260 35.0
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 2.5e-21 106.3 144 51.4
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 2.8e-20 102.8 256 37.5
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 3.7e-20 102.4 255 34.5
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 6.2e-20 101.7 259 34.7
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 1.1e-19 100.9 263 35.4
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 6.9e-19 98.2 259 34.0
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 9.0e-19 97.8 260 34.2
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.2e-18 97.4 252 33.3
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.3e-17 94.0 259 31.7
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 1.3e-17 94.0 226 35.8
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 2.9e-17 92.8 264 33.0
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 3.8e-17 92.4 128 45.3
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 7.1e-16 88.2 261 34.1
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 1.6e-15 87.0 122 45.9
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 2.1e-15 86.7 130 43.1
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 3.5e-15 85.9 238 31.9
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 3.5e-15 85.9 237 30.4
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 6.0e-15 85.1 234 32.9
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 7.9e-15 84.7 259 32.4
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 1.0e-14 84.3 231 34.6
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 2.3e-14 83.2 231 34.2
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 2.3e-14 83.2 252 29.8
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 3.9e-14 82.4 234 32.1
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 5.1e-14 82.0 248 31.0
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 6.7e-14 81.6 236 31.4
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 1.5e-13 80.5 254 31.1
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 2.5e-13 79.7 200 34.0
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 5.7e-13 78.6 184 34.8
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 9.7e-13 77.8 231 32.5
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 1.3e-12 77.4 205 33.7
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 1.3e-12 77.4 205 33.7
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 1.3e-12 77.4 245 30.6
vmacro05351 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 1.6e-12 77.0 244 30.7
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 2.2e-12 76.6 221 29.0
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 2.8e-12 76.3 193 35.8
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 2.8e-12 76.3 261 30.3
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 4.8e-12 75.5 204 30.4
HanXRQChr02g0053631 Helianthus annuus HOM05D003500 ORTHO05D003919 6.3e-12 75.1 162 35.2
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 6.3e-12 75.1 203 36.5
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.1e-11 74.3 156 32.7
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 1.4e-11 73.9 266 29.3
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 2.4e-11 73.2 262 27.1
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 4.1e-11 72.4 211 34.6
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 4.1e-11 72.4 212 33.5
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 5.3e-11 72.0 224 30.4
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 5.3e-11 72.0 195 32.3
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 6.9e-11 71.6 238 30.7
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 6.9e-11 71.6 156 32.7
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 6.9e-11 71.6 210 31.9
Lsat_1_v5_gn_6_63900 Lactuca sativa HOM05D003500 ORTHO05D003919 6.9e-11 71.6 169 33.1
HanXRQChr17g0541731 Helianthus annuus HOM05D003500 ORTHO05D003919 9.0e-11 71.2 176 34.1
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 1.2e-10 70.9 210 32.9
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 1.5e-10 70.5 208 31.7
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 3.4e-10 69.3 127 37.8
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 3.4e-10 69.3 223 31.4
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 4.5e-10 68.9 192 32.8
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 5.9e-10 68.6 144 31.9
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 5.9e-10 68.6 218 29.4
ECA233G0641 Erigeron canadensis HOM05D003500 ORTHO05D003919 1.0e-09 67.8 173 32.4
BcaC09g52062 Brassica carinata HOM05D003500 ORTHO05D003919 1.3e-09 67.4 244 28.7
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 2.2e-09 66.6 211 31.3
BraA01t00536Z Brassica rapa HOM05D003500 ORTHO05D003919 2.9e-09 66.2 235 29.8
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 3.8e-09 65.9 238 29.0
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 5.0e-09 65.5 242 28.5
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 8.5e-09 64.7 199 32.2
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 1.1e-08 64.3 91 46.2
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 1.1e-08 64.3 262 27.5
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.4e-08 63.9 208 31.2
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 1.9e-08 63.5 233 27.9
Sp7g30440 Schrenkiella parvula HOM05D003500 ORTHO05D003919 1.9e-08 63.5 256 28.5
Thhalv10025931m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 3.2e-08 62.8 253 27.7
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 3.2e-08 62.8 203 29.6
C01p06230 Brassica napus HOM05D003500 ORTHO05D003919 4.2e-08 62.4 139 35.3
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 5.5e-08 62.0 177 31.1
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 5.5e-08 62.0 177 31.1
AT4G32680 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 7.2e-08 61.6 219 29.7
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 1.2e-07 60.8 241 25.3
Aa31LG2G16940 Aethionema arabicum HOM05D003500 ORTHO05D003919 1.6e-07 60.5 217 28.6
AL7G19060 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 1.6e-07 60.5 215 28.8
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 2.1e-07 60.1 189 30.7
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 4.6e-07 58.9 102 40.2
A08p18080 Brassica napus HOM05D003500 ORTHO05D003919 6.1e-07 58.5 66 50.0
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 7.9e-07 58.2 84 40.5
Sed0000644 Sechium edule HOM05D003500 ORTHO05D003919 7.9e-07 58.2 115 39.1
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 1.0e-06 57.8 64 51.6
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 1.0e-06 57.8 95 36.8
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 1.0e-06 57.8 64 51.6
Sabra03G0031200 Salix brachista HOM05D003500 ORTHO05D003919 1.8e-06 57.0 91 39.6
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 2.3e-06 56.6 135 34.1
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 3.0e-06 56.2 182 29.1
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 3.0e-06 56.2 168 31.5
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 3.0e-06 56.2 194 28.9
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 3.9e-06 55.8 123 33.3
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 3.9e-06 55.8 230 29.6
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 3.9e-06 55.8 97 42.3
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 5.1e-06 55.5 103 34.0
Carub.0007s0785 Capsella rubella HOM05D003500 ORTHO05D003919 5.1e-06 55.5 214 27.6
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 6.7e-06 55.1 97 40.2
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 8.8e-06 54.7 226 29.6


User provided reference genes

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