Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.4e-162 576.2 291 100.0
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 9.3e-143 510.4 291 88.7
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.7e-136 489.6 291 85.6
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 1.1e-135 486.9 291 84.9
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 4.5e-129 464.9 295 79.3
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 4.9e-128 461.5 295 79.0
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 6.4e-128 461.1 293 78.5
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 3.2e-127 458.8 295 79.0
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 3.9e-125 451.8 293 77.5
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 6.7e-125 451.1 295 77.6
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 1.3e-123 446.8 293 77.8
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.6e-123 446.4 295 75.6
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 2.8e-123 445.7 295 76.3
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 4.0e-122 441.8 294 77.2
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 5.3e-122 441.4 295 74.9
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 6.9e-122 441.0 295 74.9
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 2.0e-121 439.5 294 76.5
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 5.8e-121 438.0 295 74.6
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 4.9e-120 434.9 294 75.9
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 4.9e-120 434.9 293 75.1
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 4.9e-120 434.9 293 75.1
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 2.5e-119 432.6 317 71.0
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 5.5e-119 431.4 279 77.1
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 3.5e-118 428.7 291 73.5
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 4.6e-118 428.3 295 72.2
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 5.1e-117 424.9 293 72.0
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 5.1e-117 424.9 290 72.8
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 1.1e-116 423.7 293 72.4
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 1.9e-116 422.9 293 72.7
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 4.8e-115 418.3 303 70.6
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 4.8e-115 418.3 293 70.6
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 4.8e-115 418.3 291 71.1
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 8.2e-115 417.5 296 72.6
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 1.1e-114 417.2 275 75.3
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.8e-114 416.4 292 72.9
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 2.4e-114 416.0 292 71.6
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 4.1e-114 415.2 294 72.4
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 4.1e-114 415.2 304 69.7
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 4.1e-114 415.2 281 73.7
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 6.9e-114 414.5 293 71.3
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 9.0e-114 414.1 297 71.7
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 9.0e-114 414.1 294 72.4
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 1.5e-113 413.3 293 70.3
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 3.4e-113 412.1 292 73.6
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 4.5e-113 411.8 300 69.3
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 5.9e-113 411.4 275 73.8
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 7.7e-113 411.0 308 68.2
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.0e-112 410.6 294 72.4
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 1.0e-112 410.6 297 69.4
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 1.0e-112 410.6 290 71.4
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 1.3e-112 410.2 278 73.4
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 2.2e-112 409.5 304 69.4
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 2.9e-112 409.1 291 73.5
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 2.9e-112 409.1 291 72.5
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 2.9e-112 409.1 297 69.7
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 2.9e-112 409.1 295 70.8
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 5.0e-112 408.3 293 68.9
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 1.4e-111 406.8 291 68.7
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 1.9e-111 406.4 292 71.9
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 9.4e-111 404.1 296 69.6
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 9.4e-111 404.1 305 67.5
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 2.1e-110 402.9 295 69.2
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 3.6e-110 402.1 301 67.8
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 3.6e-110 402.1 308 66.9
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 4.6e-110 401.7 291 71.8
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 6.1e-110 401.4 273 71.8
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 1.0e-109 400.6 291 71.1
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 1.4e-109 400.2 292 70.2
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 1.8e-109 399.8 302 67.2
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 1.8e-109 399.8 298 69.8
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 1.8e-109 399.8 280 73.9
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 2.3e-109 399.4 293 70.0
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 3.0e-109 399.1 308 66.9
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 8.8e-109 397.5 294 71.8
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 1.1e-108 397.1 290 71.4
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 1.1e-108 397.1 296 69.6
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 1.5e-108 396.7 371 57.7
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 2.0e-108 396.4 291 68.0
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 2.0e-108 396.4 290 70.3
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 4.3e-108 395.2 277 73.3
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 2.2e-107 392.9 293 71.0
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 2.2e-107 392.9 293 70.3
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 2.2e-107 392.9 293 71.0
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 4.8e-107 391.7 300 67.7
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 8.2e-107 391.0 293 70.0
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 1.1e-106 390.6 276 72.8
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 6.9e-106 387.9 311 65.0
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 2.6e-105 386.0 294 68.0
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 3.4e-105 385.6 446 50.7
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 1.3e-104 383.6 302 65.2
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 3.6e-102 375.6 276 69.2
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 4.7e-102 375.2 290 66.2
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 2.6e-100 369.4 273 68.9
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 9.7e-100 367.5 299 65.2
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 4.8e-99 365.2 296 65.2
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 6.3e-99 364.8 292 64.4
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 8.5e-96 354.4 285 66.0
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 5.5e-95 351.7 243 71.2
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 1.6e-94 350.1 253 71.1
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 2.7e-94 349.4 294 64.3
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 4.4e-92 342.0 276 62.3
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.7e-91 339.0 276 62.0
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 1.8e-90 336.7 282 65.2
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 7.2e-87 324.7 289 63.7
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.1e-86 323.2 204 78.4
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 3.0e-85 319.3 258 65.5
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 3.1e-82 309.3 275 60.7
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.2e-81 307.4 195 77.4
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 3.5e-81 305.8 208 73.1
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.3e-80 303.9 292 57.2
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.5e-79 299.7 292 56.8
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 7.2e-79 298.1 277 56.0
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 2.7e-78 296.2 258 60.9
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 1.2e-73 280.8 272 52.9
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 1.0e-72 277.7 279 52.7
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 7.5e-68 261.5 273 50.9
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 2.2e-67 260.0 275 50.9
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 9.2e-66 254.6 251 59.4
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 2.3e-64 250.0 166 72.9
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 1.4e-61 240.7 272 48.2
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 1.8e-61 240.4 168 70.8
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 7.5e-60 235.0 267 45.7
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 8.3e-59 231.5 267 46.8
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 2.4e-58 229.9 168 68.5
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 8.6e-56 221.5 269 51.7
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 2.8e-54 216.5 268 45.9
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 1.3e-51 207.6 169 69.2
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 3.7e-51 206.1 213 56.8
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 4.7e-38 162.5 140 60.7
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 6.2e-38 162.2 117 70.1
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 2.4e-34 150.2 133 56.4
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 1.1e-21 108.2 125 48.8
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 2.1e-17 94.0 96 53.1
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 3.5e-17 93.2 239 38.5
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 1.7e-11 74.3 176 40.3
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 3.0e-08 63.5 52 53.8


User provided reference genes

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