Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.9e-173 612.5 327 100.0
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 3.2e-160 568.5 327 91.1
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 8.6e-129 464.2 327 74.0
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 3.3e-128 462.2 326 75.8
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 1.2e-127 460.3 327 75.2
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 6.1e-127 458.0 326 75.2
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 6.8e-126 454.5 326 74.5
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 9.8e-125 450.7 327 73.7
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 1.6e-122 443.4 327 72.8
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.6e-122 443.4 326 72.4
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 4.5e-122 441.8 330 72.1
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 2.9e-121 439.1 327 71.9
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 2.9e-121 439.1 324 72.8
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 1.1e-120 437.2 327 71.3
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 4.3e-120 435.3 320 72.2
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 4.3e-120 435.3 328 72.0
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 5.6e-120 434.9 322 70.8
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.2e-119 433.7 328 70.7
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 4.7e-119 431.8 327 70.3
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 4.7e-119 431.8 327 69.4
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 2.3e-118 429.5 326 69.6
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 3.1e-118 429.1 328 70.7
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 4.0e-118 428.7 331 70.1
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 5.2e-118 428.3 327 71.3
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.5e-117 426.8 295 75.3
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 1.5e-117 426.8 328 69.2
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 3.4e-117 425.6 327 70.6
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 1.7e-116 423.3 322 70.2
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.7e-116 423.3 331 70.4
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 2.2e-116 422.9 323 69.0
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 4.9e-116 421.8 328 68.6
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 2.4e-115 419.5 322 69.6
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 3.2e-115 419.1 328 69.5
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 5.4e-115 418.3 327 68.2
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 9.2e-115 417.5 329 67.8
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 9.2e-115 417.5 330 67.9
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.2e-114 417.2 330 67.9
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 1.2e-114 417.2 330 67.6
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 1.2e-114 417.2 326 69.0
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.6e-114 416.8 327 67.9
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 2.7e-114 416.0 327 69.1
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.6e-114 415.2 327 67.6
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 7.8e-114 414.5 327 69.4
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 7.8e-114 414.5 327 69.1
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.3e-113 413.7 320 70.6
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.7e-113 413.3 327 67.3
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.7e-113 413.3 327 69.1
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 2.3e-113 412.9 348 64.1
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 1.1e-112 410.6 260 80.8
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 1.5e-112 410.2 349 65.6
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 1.9e-112 409.8 327 67.3
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 5.6e-112 408.3 264 79.2
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 7.3e-112 407.9 329 68.1
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 9.5e-112 407.5 298 71.1
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 9.5e-112 407.5 325 67.1
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 9.5e-112 407.5 264 78.4
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 1.6e-111 406.8 328 68.6
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 2.1e-111 406.4 327 66.7
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 2.8e-111 406.0 259 79.9
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.4e-110 403.7 265 77.4
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.8e-110 403.3 259 80.7
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 2.3e-110 402.9 249 83.9
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 5.2e-110 401.7 332 66.9
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 5.8e-109 398.3 332 65.7
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 5.8e-109 398.3 329 65.3
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 2.2e-108 396.4 330 65.8
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 2.9e-108 396.0 296 71.3
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 3.7e-108 395.6 260 77.3
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 4.9e-108 395.2 335 64.2
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 4.9e-108 395.2 250 82.8
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.1e-107 394.0 260 78.5
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.9e-107 393.3 266 75.2
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 4.1e-107 392.1 260 78.5
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 9.2e-107 391.0 327 64.2
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 6.0e-106 388.3 376 59.0
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 3.9e-105 385.6 236 84.3
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 5.1e-105 385.2 292 71.6
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 5.6e-104 381.7 334 63.5
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 7.3e-104 381.3 299 65.9
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 3.6e-103 379.0 327 63.6
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.3e-102 376.3 356 59.8
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 6.8e-102 374.8 259 74.1
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 2.6e-101 372.9 328 64.0
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 3.4e-101 372.5 238 79.4
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 3.2e-99 365.9 296 64.2
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 7.1e-99 364.8 259 70.3
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 1.7e-97 360.1 269 68.8
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.1e-96 357.5 250 74.0
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 2.6e-93 346.3 332 58.1
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 2.7e-90 336.3 257 70.4
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.0e-89 334.3 235 71.1
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 8.7e-89 331.3 221 76.9
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.1e-86 324.3 231 72.3
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.4e-86 323.9 327 56.9
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 9.0e-86 321.2 266 64.3
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.9e-83 313.5 191 83.2
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.6e-82 310.5 189 84.1
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 2.3e-81 306.6 248 68.1
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 3.1e-78 296.2 275 56.0
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 9.0e-78 294.7 216 66.7
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 3.4e-77 292.7 261 62.5
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 9.3e-75 284.6 260 55.4
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 1.8e-70 270.4 260 53.1
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.4e-62 243.4 263 48.3
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.3e-62 242.3 251 51.4
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 6.9e-62 241.9 253 50.6
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 7.1e-59 231.9 253 49.0
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.6e-58 229.2 249 53.4
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.1e-56 224.6 129 88.4
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 7.9e-50 201.8 169 66.3
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 6.3e-47 192.2 250 42.4
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 4.5e-45 186.0 249 44.2
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 4.8e-39 166.0 246 37.8
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 1.8e-38 164.1 123 69.1
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 3.0e-25 120.2 289 34.9
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.1e-22 111.7 244 28.7
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 4.5e-21 106.3 235 31.9
Atru.chr6.459 Acer truncatum HOM05D006532 ORTHO05D008570 6.8e-09 65.9 146 34.2
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 8.9e-09 65.5 88 46.6
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 1.1e-06 58.5 32 93.8
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 2.4e-06 57.4 52 53.8


User provided reference genes

Program Settings