Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G226450 Populus trichocarpa HOM05D000521 ORTHO05D000384 3.1e-105 385.2 201 100.0
Potri.006G226400 Populus trichocarpa HOM05D000521 ORTHO05D000384 6.5e-71 271.2 140 100.0
Sabra06G0175200 Salix brachista HOM05D000521 ORTHO05D000384 2.9e-63 245.7 140 89.3
Potri.018G061901 Populus trichocarpa HOM05D000521 ORTHO05D000384 3.3e-54 215.7 140 78.6
TAR636G0778 Trochodendron aralioides HOM05D000521 ORTHO05D000384 7.6e-27 124.8 149 51.0
Aqoxy7G01181 Aquilegia oxysepala HOM05D000521 ORTHO05D000384 5.4e-25 118.6 149 48.3
Dinv22881 Davidia involucrata HOM05D000521 ORTHO05D000384 5.4e-25 118.6 141 52.5
TAR624G0114 Trochodendron aralioides HOM05D000521 ORTHO05D000384 3.9e-23 112.5 149 48.3
Thecc.09G056700 Theobroma cacao HOM05D000521 ORTHO05D000384 8.7e-23 111.3 147 51.0
Ciclev10008000m.g Citrus clementina HOM05D000521 ORTHO05D000384 1.5e-22 110.5 140 52.9
Sp4g06290 Schrenkiella parvula HOM05D000521 ORTHO05D000384 3.3e-22 109.4 150 49.3
TAR383G1067 Trochodendron aralioides HOM05D000521 ORTHO05D000384 4.3e-22 109.0 149 45.6
Atru.chr7.1104 Acer truncatum HOM05D000521 ORTHO05D000384 2.8e-21 106.3 141 48.9
Duzib187G1227 Durio zibethinus HOM05D000521 ORTHO05D000384 1.1e-20 104.4 150 48.0
Aa31LG5G9600 Aethionema arabicum HOM05D000521 ORTHO05D000384 1.8e-20 103.6 151 45.0
CiPaw.16G027500 Carya illinoinensis HOM05D000521 ORTHO05D000384 2.4e-20 103.2 140 45.7
QL02p000896 Quercus lobata HOM05D000521 ORTHO05D000384 2.4e-20 103.2 149 43.6
Nn6g35518 Nelumbo nucifera HOM05D000521 ORTHO05D000384 4.0e-20 102.4 150 45.3
Nn8g38806 Nelumbo nucifera HOM05D000521 ORTHO05D000384 3.4e-19 99.4 150 44.7
Manes.03G049700 Manihot esculenta HOM05D000521 ORTHO05D000384 4.4e-19 99.0 140 46.4
THA.LOC104803722 Tarenaya hassleriana HOM05D000521 ORTHO05D000384 7.6e-19 98.2 156 44.9
AT2G26190 Arabidopsis thaliana HOM05D000521 ORTHO05D000384 1.3e-18 97.4 151 44.4
Dinv04015 Davidia involucrata HOM05D000521 ORTHO05D000384 4.9e-18 95.5 140 45.0
Duzib168G0747 Durio zibethinus HOM05D000521 ORTHO05D000384 6.4e-18 95.1 143 46.9
Carub.0004s0604 Capsella rubella HOM05D000521 ORTHO05D000384 1.1e-17 94.4 151 43.0
THA.LOC104819894 Tarenaya hassleriana HOM05D000521 ORTHO05D000384 1.4e-17 94.0 158 45.6
AL4G18660 Arabidopsis lyrata HOM05D000521 ORTHO05D000384 2.4e-17 93.2 151 42.4
Duzib168G2168 Durio zibethinus HOM05D000521 ORTHO05D000384 9.3e-17 91.3 146 43.8
BraA04t17605Z Brassica rapa HOM05D000521 ORTHO05D000384 1.2e-16 90.9 151 43.0
CARHR114990 Cardamine hirsuta HOM05D000521 ORTHO05D000384 2.1e-16 90.1 151 41.7
BcaC02g08304 Brassica carinata HOM05D000521 ORTHO05D000384 2.7e-16 89.7 186 40.3
GSVIVG01015178001 Vitis vinifera HOM05D000521 ORTHO05D000384 7.8e-16 88.2 150 42.0
C04p55970 Brassica napus HOM05D000521 ORTHO05D000384 1.3e-15 87.4 153 42.5
BolC4t27130H Brassica oleracea HOM05D000521 ORTHO05D000384 1.3e-15 87.4 153 42.5
A04p20260 Brassica napus HOM05D000521 ORTHO05D000384 1.7e-15 87.0 151 41.7
Duzib150G0993 Durio zibethinus HOM05D000521 ORTHO05D000384 2.3e-15 86.7 153 39.9
Thecc.09G085800 Theobroma cacao HOM05D000521 ORTHO05D000384 2.3e-15 86.7 147 42.2
BcaB06g29600 Brassica carinata HOM05D000521 ORTHO05D000384 3.0e-15 86.3 158 39.9
TWI34G1800 Tripterygium wilfordii HOM05D000521 ORTHO05D000384 5.1e-15 85.5 143 42.0
Atru.chr7.1622 Acer truncatum HOM05D000521 ORTHO05D000384 8.7e-15 84.7 148 39.2
Haze_18161 Corylus avellana HOM05D000521 ORTHO05D000384 8.7e-15 84.7 149 40.3
Prupe.1G409800 Prunus persica HOM05D000521 ORTHO05D000384 1.9e-14 83.6 113 46.9
Gohir.A05G030800 Gossypium hirsutum HOM05D000521 ORTHO05D000384 4.3e-14 82.4 154 37.7
GSVIVG01016801001 Vitis vinifera HOM05D000521 ORTHO05D000384 4.3e-14 82.4 146 38.4
AT4G33050 Arabidopsis thaliana HOM05D000521 ORTHO05D000384 5.6e-14 82.0 115 47.0
Cfa017969 Carpinus fangiana HOM05D000521 ORTHO05D000384 7.3e-14 81.6 149 40.9
Gohir.D05G032200 Gossypium hirsutum HOM05D000521 ORTHO05D000384 9.6e-14 81.3 158 39.2
AL7G18530 Arabidopsis lyrata HOM05D000521 ORTHO05D000384 1.6e-13 80.5 115 46.1
Cc08_g10840 Coffea canephora HOM05D000521 ORTHO05D000384 1.6e-13 80.5 140 42.9
Gohir.D06G072400 Gossypium hirsutum HOM05D000521 ORTHO05D000384 1.6e-13 80.5 145 40.7
Gorai.010G084300 Gossypium raimondii HOM05D000521 ORTHO05D000384 1.6e-13 80.5 145 41.4
COL.COLO4_21080 Corchorus olitorius HOM05D000521 ORTHO05D000384 2.1e-13 80.1 144 44.4
Gorai.009G032400 Gossypium raimondii HOM05D000521 ORTHO05D000384 2.8e-13 79.7 158 40.5
BcaB03g12773 Brassica carinata HOM05D000521 ORTHO05D000384 6.2e-13 78.6 115 45.2
Ciclev10010400m.g Citrus clementina HOM05D000521 ORTHO05D000384 1.4e-12 77.4 157 36.9
CARHR241060 Cardamine hirsuta HOM05D000521 ORTHO05D000384 2.4e-12 76.6 115 46.1
Nitab4.5_0005716g0010 Nicotiana tabacum HOM05D000521 ORTHO05D000384 2.4e-12 76.6 140 39.3
Sp7g30810 Schrenkiella parvula HOM05D000521 ORTHO05D000384 2.4e-12 76.6 115 44.3
C03p86840 Brassica napus HOM05D000521 ORTHO05D000384 4.0e-12 75.9 115 44.3
Carub.0007s0740 Capsella rubella HOM05D000521 ORTHO05D000384 5.3e-12 75.5 115 45.2
Lj5C42T2 Lonicera japonica HOM05D000521 ORTHO05D000384 9.0e-12 74.7 150 39.3
Lj5C42T7 Lonicera japonica HOM05D000521 ORTHO05D000384 9.0e-12 74.7 150 39.3
BraA08t33730Z Brassica rapa HOM05D000521 ORTHO05D000384 1.2e-11 74.3 115 44.3
Actinidia30324 Actinidia chinensis HOM05D000521 ORTHO05D000384 1.5e-11 73.9 146 39.0
Gohir.A06G073533 Gossypium hirsutum HOM05D000521 ORTHO05D000384 2.0e-11 73.6 145 38.6
Peaxi162Scf00073g00056 Petunia axillaris HOM05D000521 ORTHO05D000384 2.0e-11 73.6 139 38.1
Nitab4.5_0002039g0050 Nicotiana tabacum HOM05D000521 ORTHO05D000384 3.4e-11 72.8 140 38.6
Cpa.g.sc28.151 Carica papaya HOM05D000521 ORTHO05D000384 4.5e-11 72.4 160 36.2
Glyma.09G065000 Glycine max HOM05D000521 ORTHO05D000384 2.2e-10 70.1 150 38.0
vmacro17138 Vaccinium macrocarpon HOM05D000521 ORTHO05D000384 2.2e-10 70.1 147 36.7
PSO210G1821 Papaver somniferum HOM05D000521 ORTHO05D000384 2.9e-10 69.7 155 38.1
CSS0028721 Camellia sinensis var. sinensis HOM05D000521 ORTHO05D000384 3.8e-10 69.3 123 42.3
Gorai.009G043900 Gossypium raimondii HOM05D000521 ORTHO05D000384 4.9e-10 68.9 140 42.1
MD15G1210200 Malus domestica HOM05D000521 ORTHO05D000384 6.4e-10 68.6 157 38.9
PSO210G2261 Papaver somniferum HOM05D000521 ORTHO05D000384 6.4e-10 68.6 150 37.3
Lalb_Chr08g0232351 Lupinus albus HOM05D000521 ORTHO05D000384 8.4e-10 68.2 146 39.7
vmacro00127 Vaccinium macrocarpon HOM05D000521 ORTHO05D000384 8.4e-10 68.2 143 37.1
Rhsim05G0017000 Rhododendron simsii HOM05D000521 ORTHO05D000384 1.1e-09 67.8 146 37.0
Thhalv10025033m.g Eutrema salsugineum HOM05D000521 ORTHO05D000384 1.9e-09 67.0 115 40.0
Gohir.D05G042800 Gossypium hirsutum HOM05D000521 ORTHO05D000384 1.9e-09 67.0 140 41.4
BcaC09g52103 Brassica carinata HOM05D000521 ORTHO05D000384 2.4e-09 66.6 100 46.0
BolC1t00542H Brassica oleracea HOM05D000521 ORTHO05D000384 2.4e-09 66.6 100 46.0
Gohir.A05G041100 Gossypium hirsutum HOM05D000521 ORTHO05D000384 2.4e-09 66.6 140 41.4
CSS0034351 Camellia sinensis var. sinensis HOM05D000521 ORTHO05D000384 4.2e-09 65.9 149 35.6
MD02G1082300 Malus domestica HOM05D000521 ORTHO05D000384 4.2e-09 65.9 158 33.5
EL10Ac8g19181 Beta vulgaris HOM05D000521 ORTHO05D000384 5.4e-09 65.5 150 39.3
Oeu018632.1 Olea europaea HOM05D000521 ORTHO05D000384 5.4e-09 65.5 141 33.3
C01p05620 Brassica napus HOM05D000521 ORTHO05D000384 7.1e-09 65.1 100 45.0
BraA01t00497Z Brassica rapa HOM05D000521 ORTHO05D000384 7.1e-09 65.1 100 45.0
CANSAT25G1196 Cannabis sativa HOM05D000521 ORTHO05D000384 7.1e-09 65.1 141 38.3
Glyma.15G171000 Glycine max HOM05D000521 ORTHO05D000384 7.1e-09 65.1 149 36.2
Hma1.2p1_0169F.1_g074890 Hydrangea macrophylla HOM05D000521 ORTHO05D000384 7.1e-09 65.1 147 36.7
BolC3t20978H Brassica oleracea HOM05D000521 ORTHO05D000384 9.3e-09 64.7 109 41.3
Lj7A262T33 Lonicera japonica HOM05D000521 ORTHO05D000384 1.2e-08 64.3 141 36.2
arahy.Tifrunner.gnm1.ann1.FVT26M Arachis hypogaea HOM05D000521 ORTHO05D000384 1.6e-08 63.9 153 37.3
A01p05140 Brassica napus HOM05D000521 ORTHO05D000384 2.1e-08 63.5 100 44.0
COL.COLO4_08753 Corchorus olitorius HOM05D000521 ORTHO05D000384 2.1e-08 63.5 140 37.1
Dinv42335 Davidia involucrata HOM05D000521 ORTHO05D000384 2.1e-08 63.5 108 46.3
Phvul.009G231000 Phaseolus vulgaris HOM05D000521 ORTHO05D000384 2.1e-08 63.5 159 36.5
FAN27G0847 Fragaria x ananassa HOM05D000521 ORTHO05D000384 2.7e-08 63.2 124 37.1
Prupe.7G206600 Prunus persica HOM05D000521 ORTHO05D000384 2.7e-08 63.2 164 35.4
Dinv36783 Davidia involucrata HOM05D000521 ORTHO05D000384 3.5e-08 62.8 154 37.0
Lj7A262T34 Lonicera japonica HOM05D000521 ORTHO05D000384 3.5e-08 62.8 143 36.4
Ca_27395_v3 Cicer arietinum L. HOM05D000521 ORTHO05D000384 4.6e-08 62.4 147 36.1
AUR62033938 Chenopodium quinoa HOM05D000521 ORTHO05D000384 7.9e-08 61.6 155 35.5
Dinv28002 Davidia involucrata HOM05D000521 ORTHO05D000384 7.9e-08 61.6 119 42.9
arahy.Tifrunner.gnm1.ann1.XXQ95I Arachis hypogaea HOM05D000521 ORTHO05D000384 1.0e-07 61.2 156 36.5
FvH4_2g31640 Fragaria vesca HOM05D000521 ORTHO05D000384 1.0e-07 61.2 123 37.4
FAN24G2325 Fragaria x ananassa HOM05D000521 ORTHO05D000384 1.0e-07 61.2 123 37.4
TPR.G13427 Trifolium pratense HOM05D000521 ORTHO05D000384 1.0e-07 61.2 144 36.8
AUR62029037 Chenopodium quinoa HOM05D000521 ORTHO05D000384 1.3e-07 60.8 155 34.8
Manes.16G100400 Manihot esculenta HOM05D000521 ORTHO05D000384 1.3e-07 60.8 147 38.1
VMungo1309G1332 Vigna mungo HOM05D000521 ORTHO05D000384 1.3e-07 60.8 150 36.0
Actinidia39709 Actinidia chinensis HOM05D000521 ORTHO05D000384 1.8e-07 60.5 151 35.1
Thhalv10001975m.g Eutrema salsugineum HOM05D000521 ORTHO05D000384 1.8e-07 60.5 81 48.1
Lj6g0016617 Lotus japonicus HOM05D000521 ORTHO05D000384 1.8e-07 60.5 144 35.4
Dinv37899 Davidia involucrata HOM05D000521 ORTHO05D000384 2.3e-07 60.1 140 35.7
Medtr2g039910 Medicago truncatula HOM05D000521 ORTHO05D000384 3.9e-07 59.3 140 36.4
Sc18g0002240 Simmondsia chinensis HOM05D000521 ORTHO05D000384 3.9e-07 59.3 146 32.9
GSVIVG01035381001 Vitis vinifera HOM05D000521 ORTHO05D000384 3.9e-07 59.3 47 72.3
Lalb_Chr07g0180941 Lupinus albus HOM05D000521 ORTHO05D000384 6.7e-07 58.5 150 35.3
Lalb_Chr12g0199861 Lupinus albus HOM05D000521 ORTHO05D000384 6.7e-07 58.5 147 33.3
Manes.03G035601 Manihot esculenta HOM05D000521 ORTHO05D000384 6.7e-07 58.5 144 33.3
Rhsim11G0042500 Rhododendron simsii HOM05D000521 ORTHO05D000384 6.7e-07 58.5 145 37.9
MELO3C015490.2 Cucumis melo HOM05D000521 ORTHO05D000384 8.7e-07 58.2 151 32.5
ECA236G2383 Erigeron canadensis HOM05D000521 ORTHO05D000384 8.7e-07 58.2 153 37.3
Glyma.17G053600 Glycine max HOM05D000521 ORTHO05D000384 8.7e-07 58.2 153 35.9
Gohir.A07G021875 Gossypium hirsutum HOM05D000521 ORTHO05D000384 8.7e-07 58.2 67 55.2
Lsat_1_v5_gn_8_86641 Lactuca sativa HOM05D000521 ORTHO05D000384 8.7e-07 58.2 157 37.6
Hund06665 Selenicereus undatus HOM05D000521 ORTHO05D000384 1.5e-06 57.4 153 35.9
Ah.09g228100 Amaranthus hybridus HOM05D000521 ORTHO05D000384 1.9e-06 57.0 154 34.4
CANSAT56G1063 Cannabis sativa HOM05D000521 ORTHO05D000384 2.5e-06 56.6 156 37.2
CsaV3_1G040600 Cucumis sativus L. HOM05D000521 ORTHO05D000384 5.6e-06 55.5 151 35.1
QL02p062200 Quercus lobata HOM05D000521 ORTHO05D000384 5.6e-06 55.5 99 42.4
MBI01_g21129_MAGBIO Magnolia biondii HOM05D000521 ORTHO05D000384 7.4e-06 55.1 169 33.1
SalBow6G1135 Salvia bowleyana HOM05D000521 ORTHO05D000384 7.4e-06 55.1 144 36.8
ClCG03G015440 Citrullus lanatus HOM05D000521 ORTHO05D000384 9.6e-06 54.7 151 35.1
Haze_25934 Corylus avellana HOM05D000521 ORTHO05D000384 9.6e-06 54.7 112 41.1
Gohir.D07G021700 Gossypium hirsutum HOM05D000521 ORTHO05D000384 9.6e-06 54.7 140 34.3
Gorai.001G022400 Gossypium raimondii HOM05D000521 ORTHO05D000384 9.6e-06 54.7 140 34.3


User provided reference genes

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