Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G225167 Populus trichocarpa HOM05D000144 ORTHO05D331142 8.7e-92 340.5 199 100.0
Sabra06G0174200 Salix brachista HOM05D000144 ORTHO05D007858 1.8e-52 209.9 188 73.9
Potri.018G061700 Populus trichocarpa HOM05D000144 ORTHO05D007858 2.8e-50 202.6 187 69.5
TWI34G0926 Tripterygium wilfordii HOM05D000144 ORTHO05D007858 2.2e-34 149.8 186 53.2
Ciclev10008108m.g Citrus clementina HOM05D000144 ORTHO05D007858 1.6e-32 143.7 207 49.8
Manes.03G050500 Manihot esculenta HOM05D000144 ORTHO05D007858 2.7e-32 142.9 187 50.3
Dinv12442 Davidia involucrata HOM05D000144 ORTHO05D007858 3.5e-32 142.5 188 52.7
CSS0040828 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D007858 5.9e-32 141.7 190 51.6
CiPaw.15G036300 Carya illinoinensis HOM05D000144 ORTHO05D007858 2.9e-31 139.4 188 48.4
Actinidia25710 Actinidia chinensis HOM05D000144 ORTHO05D007858 3.8e-31 139.0 189 50.8
Lalb_Chr14g0375501 Lupinus albus HOM05D000144 ORTHO05D007858 6.5e-31 138.3 203 47.3
Prupe.1G408500 Prunus persica HOM05D000144 ORTHO05D007858 1.5e-30 137.1 208 48.1
Eucgr.C00671 Eucalyptus grandis HOM05D000144 ORTHO05D007858 2.5e-30 136.3 179 54.2
Duzib168G0360 Durio zibethinus HOM05D000144 ORTHO05D007858 1.6e-29 133.7 189 48.1
Lsat_1_v5_gn_7_61241 Lactuca sativa HOM05D000144 ORTHO05D007858 1.6e-29 133.7 187 50.3
QL02p000650 Quercus lobata HOM05D000144 ORTHO05D007858 2.1e-29 133.3 178 50.6
Nitab4.5_0003730g0080 Nicotiana tabacum HOM05D000144 ORTHO05D007858 2.8e-29 132.9 203 46.8
Cpa.g.sc7.149 Carica papaya HOM05D000144 ORTHO05D007858 3.6e-29 132.5 180 53.3
Phvul.001G045200 Phaseolus vulgaris HOM05D000144 ORTHO05D007858 3.6e-29 132.5 175 51.4
Gohir.D06G084800 Gossypium hirsutum HOM05D000144 ORTHO05D007858 4.7e-29 132.1 190 47.4
Gorai.010G098200 Gossypium raimondii HOM05D000144 ORTHO05D007858 4.7e-29 132.1 190 47.4
GSVIVG01035415001 Vitis vinifera HOM05D000144 ORTHO05D007858 6.1e-29 131.7 178 51.1
Gohir.A06G085500 Gossypium hirsutum HOM05D000144 ORTHO05D007858 1.4e-28 130.6 191 47.1
VMungo0647G2473 Vigna mungo HOM05D000144 ORTHO05D007858 1.4e-28 130.6 196 48.5
Atru.chr7.1929 Acer truncatum HOM05D000144 ORTHO05D007858 1.8e-28 130.2 178 50.0
ClCG05G018040 Citrullus lanatus HOM05D000144 ORTHO05D007858 3.0e-28 129.4 188 46.3
TAR626G1661 Trochodendron aralioides HOM05D000144 ORTHO05D007858 3.0e-28 129.4 178 50.0
Sopen08g018230 Solanum pennellii HOM05D000144 ORTHO05D007858 4.0e-28 129.0 186 46.8
Glyma.17G218800 Glycine max HOM05D000144 ORTHO05D007858 1.2e-27 127.5 175 50.3
Rhsim08G0158500 Rhododendron simsii HOM05D000144 ORTHO05D007858 1.2e-27 127.5 189 47.1
Thecc.09G058100 Theobroma cacao HOM05D000144 ORTHO05D007858 1.5e-27 127.1 189 48.7
Ah.11g044400 Amaranthus hybridus HOM05D000144 ORTHO05D007858 2.0e-27 126.7 174 47.1
Peaxi162Scf00070g00028 Petunia axillaris HOM05D000144 ORTHO05D007858 3.4e-27 125.9 174 47.7
FvH4_2g31480 Fragaria vesca HOM05D000144 ORTHO05D007858 4.4e-27 125.6 179 48.6
FAN24G0598 Fragaria x ananassa HOM05D000144 ORTHO05D007858 4.4e-27 125.6 179 48.6
Nitab4.5_0003458g0020 Nicotiana tabacum HOM05D000144 ORTHO05D007858 4.4e-27 125.6 187 47.1
CANSAT25G1581 Cannabis sativa HOM05D000144 ORTHO05D007858 5.7e-27 125.2 179 51.4
Nn6g35544 Nelumbo nucifera HOM05D000144 ORTHO05D007858 7.5e-27 124.8 187 50.8
Solyc08g062700.3 Solanum lycopersicum HOM05D000144 ORTHO05D007858 9.8e-27 124.4 187 46.5
TPR.G9944 Trifolium pratense HOM05D000144 ORTHO05D007858 9.8e-27 124.4 189 46.6
HanXRQChr09g0248311 Helianthus annuus HOM05D000144 ORTHO05D007858 1.3e-26 124.0 177 47.5
Hma1.2p1_0196F.1_g084850 Hydrangea macrophylla HOM05D000144 ORTHO05D007858 2.2e-26 123.2 177 44.6
Hma1.2p1_0196F.1_g084860 Hydrangea macrophylla HOM05D000144 ORTHO05D007858 2.2e-26 123.2 177 44.6
FAN15G0369 Fragaria x ananassa HOM05D000144 ORTHO05D007858 2.8e-26 122.9 192 45.3
CsaV3_4G035820 Cucumis sativus L. HOM05D000144 ORTHO05D007858 4.9e-26 122.1 189 46.0
Psat1g180840 Pisum sativum HOM05D000144 ORTHO05D007858 4.9e-26 122.1 178 46.6
COL.COLO4_21097 Corchorus olitorius HOM05D000144 ORTHO05D007858 6.3e-26 121.7 197 43.1
Sed0010774 Sechium edule HOM05D000144 ORTHO05D007858 6.3e-26 121.7 174 49.4
ECA240G1772 Erigeron canadensis HOM05D000144 ORTHO05D007858 8.3e-26 121.3 175 46.9
Cc08_g10950 Coffea canephora HOM05D000144 ORTHO05D007858 1.4e-25 120.6 204 43.6
Ca_00658_v3 Cicer arietinum L. HOM05D000144 ORTHO05D007858 2.4e-25 119.8 178 45.5
Ca_00702_v3 Cicer arietinum L. HOM05D000144 ORTHO05D007858 2.4e-25 119.8 178 45.5
MELO3C016887.2 Cucumis melo HOM05D000144 ORTHO05D007858 2.4e-25 119.8 189 45.0
CAN.G56.1 Capsicum annuum HOM05D000144 ORTHO05D007858 3.1e-25 119.4 187 44.9
FAN20G1720 Fragaria x ananassa HOM05D000144 ORTHO05D007858 3.1e-25 119.4 204 45.1
MD15G1055400 Malus domestica HOM05D000144 ORTHO05D007858 4.1e-25 119.0 189 48.7
arahy.Tifrunner.gnm1.ann1.K67LMX Arachis hypogaea HOM05D000144 ORTHO05D007858 5.4e-25 118.6 178 48.3
AUR62039153 Chenopodium quinoa HOM05D000144 ORTHO05D007858 5.4e-25 118.6 176 44.9
PSO210G0248 Papaver somniferum HOM05D000144 ORTHO05D007858 7.0e-25 118.2 199 42.2
AUR62009111 Chenopodium quinoa HOM05D000144 ORTHO05D007858 9.2e-25 117.9 186 45.2
Sc06g0001040 Simmondsia chinensis HOM05D000144 ORTHO05D007858 9.2e-25 117.9 175 45.7
arahy.Tifrunner.gnm1.ann1.ZKP4WK Arachis hypogaea HOM05D000144 ORTHO05D007858 1.2e-24 117.5 172 46.5
BraA01t00496Z Brassica rapa HOM05D000144 ORTHO05D007858 2.0e-24 116.7 194 43.8
Lj5g0003534 Lotus japonicus HOM05D000144 ORTHO05D007858 2.7e-24 116.3 208 42.8
Aqoxy7G04003 Aquilegia oxysepala HOM05D000144 ORTHO05D007858 3.5e-24 115.9 186 43.5
BcaC09g52104 Brassica carinata HOM05D000144 ORTHO05D007858 3.5e-24 115.9 192 44.3
C01p05610 Brassica napus HOM05D000144 ORTHO05D007858 3.5e-24 115.9 192 44.3
DCAR_007737 Daucus carota HOM05D000144 ORTHO05D007858 3.5e-24 115.9 204 41.2
PSO210G1977 Papaver somniferum HOM05D000144 ORTHO05D007858 3.5e-24 115.9 201 42.8
MBI11_g29744_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D007858 4.5e-24 115.5 175 45.7
A01p05130 Brassica napus HOM05D000144 ORTHO05D007858 7.8e-24 114.8 192 43.8
SGA_v2.0_scaffold20G09201 Striga asiatica HOM05D000144 ORTHO05D007858 7.8e-24 114.8 183 42.1
Sp7g30820 Schrenkiella parvula HOM05D000144 ORTHO05D007858 1.0e-23 114.4 198 44.4
Hund03313 Selenicereus undatus HOM05D000144 ORTHO05D007858 1.7e-23 113.6 176 50.0
EL10Ac2g03820 Beta vulgaris HOM05D000144 ORTHO05D007858 2.3e-23 113.2 178 43.3
Thhalv10025014m.g Eutrema salsugineum HOM05D000144 ORTHO05D007858 6.6e-23 111.7 179 49.2
Medtr2g023120 Medicago truncatula HOM05D000144 ORTHO05D007858 6.6e-23 111.7 173 45.1
BolC1t00541H Brassica oleracea HOM05D000144 ORTHO05D007858 8.6e-23 111.3 192 42.2
MSTRG.25969 Avicennia marina HOM05D000144 ORTHO05D007858 1.5e-22 110.5 171 46.8
BcaB01g04144 Brassica carinata HOM05D000144 ORTHO05D007858 1.5e-22 110.5 182 43.4
Migut.A00110 Erythranthe guttata HOM05D000144 ORTHO05D007858 1.9e-22 110.2 175 43.4
AL7G18520 Arabidopsis lyrata HOM05D000144 ORTHO05D007858 3.3e-22 109.4 210 43.8
unitig_748.g7531 Utricularia gibba HOM05D000144 ORTHO05D007858 4.3e-22 109.0 171 43.9
THA.LOC104811050 Tarenaya hassleriana HOM05D000144 ORTHO05D007858 7.3e-22 108.2 200 41.5
vmacro17526 Vaccinium macrocarpon HOM05D000144 ORTHO05D007858 7.3e-22 108.2 206 46.1
AT4G33060 Arabidopsis thaliana HOM05D000144 ORTHO05D007858 9.5e-22 107.8 210 40.5
Carub.0007s0739 Capsella rubella HOM05D000144 ORTHO05D007858 1.2e-21 107.5 210 42.9
SalBow4G0930 Salvia bowleyana HOM05D000144 ORTHO05D007858 1.2e-21 107.5 181 43.6
Haze_18149 Corylus avellana HOM05D000144 ORTHO05D007858 3.0e-20 102.8 185 44.3
CARHR241070 Cardamine hirsuta HOM05D000144 ORTHO05D007858 2.0e-19 100.1 174 44.3
Cfa017981 Carpinus fangiana HOM05D000144 ORTHO05D007858 2.2e-18 96.7 174 45.4
Lj7A257G27 Lonicera japonica HOM05D000144 ORTHO05D007858 5.4e-17 92.0 98 56.1
RcHm_v2.0_Chr6g0311311 Rosa chinensis HOM05D000144 ORTHO05D007858 5.4e-17 92.0 209 37.8
SHI18713 Sapria himalayana HOM05D000144 ORTHO05D007858 7.8e-16 88.2 177 42.4
Os01g0582400 Oryza sativa ssp. japonica HOM05D000144 ORTHO05D007858 3.3e-14 82.8 183 33.9
MD08G1066000 Malus domestica HOM05D000144 ORTHO05D007858 1.2e-13 80.9 107 53.3
ATR0051G064 Amborella trichopoda HOM05D000144 ORTHO05D007858 1.6e-13 80.5 201 34.3
Aa31sc290G20 Aethionema arabicum HOM05D000144 ORTHO05D007858 6.2e-13 78.6 192 35.4
HPP92_022916 Vanilla planifolia HOM05D000144 ORTHO05D007858 1.4e-12 77.4 166 36.1
Mapoly0120s0015 Marchantia polymorpha HOM05D000144 ORTHO05D007858 5.2e-12 75.5 168 36.9
AagrBONN_evm.TU.Sc2ySwM_228.3582 Anthoceros agrestis HOM05D000144 ORTHO05D007858 5.8e-11 72.0 114 41.2
CDE02G3934 Ceratophyllum demersum HOM05D000144 ORTHO05D007858 1.3e-10 70.9 95 49.5
CBR_g18892 Chara braunii HOM05D000144 ORTHO05D007858 2.2e-10 70.1 116 41.4
Pp3c19_19340 Physcomitrium patens HOM05D000144 ORTHO05D007858 2.2e-10 70.1 117 41.9
SMO201G0180 Selaginella moellendorffii HOM05D000144 ORTHO05D007858 5.0e-07 58.9 113 37.2
Zm00001eb160460 Zea mays HOM05D000144 ORTHO05D007858 9.5e-06 54.7 92 43.5


User provided reference genes

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