Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 3.4e-130 468.4 247 100.0
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 8.8e-118 427.2 248 92.3
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 1.2e-74 283.9 196 76.0
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 3.5e-74 282.3 249 65.9
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 1.7e-73 280.0 252 65.9
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 1.1e-72 277.3 229 67.7
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 1.9e-72 276.6 246 64.6
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 4.7e-71 271.9 211 69.2
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 1.8e-70 270.0 183 74.9
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 2.3e-70 269.6 247 64.8
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 2.3e-70 269.6 249 62.7
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 4.0e-70 268.9 198 73.7
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 4.0e-70 268.9 239 65.3
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 5.2e-70 268.5 253 61.7
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 3.4e-69 265.8 194 72.2
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 7.5e-69 264.6 248 63.7
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 2.9e-68 262.7 243 61.3
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 2.4e-67 259.6 175 76.0
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 4.1e-67 258.8 236 65.3
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 5.4e-67 258.5 242 62.0
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 7.0e-67 258.1 194 69.1
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 9.2e-67 257.7 193 71.5
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 1.2e-66 257.3 236 64.0
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 1.2e-66 257.3 239 64.0
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 1.6e-66 256.9 235 64.7
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 2.7e-66 256.1 248 58.5
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 2.7e-66 256.1 208 68.8
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.7e-65 253.4 247 60.7
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 1.7e-65 253.4 192 71.9
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 2.3e-65 253.1 172 75.6
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 2.3e-65 253.1 247 59.5
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 3.0e-65 252.7 246 58.5
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 3.9e-65 252.3 236 63.1
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 5.0e-65 251.9 242 59.1
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 6.6e-65 251.5 209 65.6
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 8.6e-65 251.1 251 59.8
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 8.6e-65 251.1 173 74.0
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.1e-64 250.8 247 60.3
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 1.9e-64 250.0 216 66.2
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 2.5e-64 249.6 195 70.8
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 3.3e-64 249.2 247 59.1
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 1.2e-63 247.3 251 57.8
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 1.6e-63 246.9 256 58.2
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 1.4e-62 243.8 211 64.0
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 1.8e-62 243.4 192 67.7
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 1.8e-62 243.4 297 53.9
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 4.0e-62 242.3 256 57.0
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 4.0e-62 242.3 253 58.5
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 1.2e-61 240.7 212 65.6
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 7.5e-61 238.0 230 60.9
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 1.3e-60 237.3 206 63.6
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 1.3e-60 237.3 204 65.2
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 2.2e-60 236.5 245 55.9
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 2.9e-60 236.1 256 55.5
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 3.7e-60 235.7 226 55.8
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 4.9e-60 235.3 247 55.1
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 1.1e-59 234.2 247 57.1
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 1.1e-59 234.2 195 64.1
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 1.4e-59 233.8 256 55.9
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 1.9e-59 233.4 247 57.1
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 3.2e-59 232.6 208 63.0
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 4.1e-59 232.3 209 63.2
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 5.4e-59 231.9 208 62.0
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 5.4e-59 231.9 208 62.0
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 5.4e-59 231.9 208 62.0
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 5.4e-59 231.9 205 62.0
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 7.1e-59 231.5 241 57.7
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 9.2e-59 231.1 202 65.8
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 9.2e-59 231.1 208 62.5
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 1.7e-57 226.9 225 53.8
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 3.9e-57 225.7 194 63.9
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 8.6e-57 224.6 195 62.6
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 8.6e-57 224.6 210 57.6
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 1.1e-56 224.2 204 61.8
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 3.3e-56 222.6 212 60.4
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 7.3e-56 221.5 177 66.1
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 3.1e-54 216.1 225 55.6
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 2.6e-53 213.0 215 57.7
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 2.6e-53 213.0 169 65.7
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 4.4e-53 212.2 211 57.8
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 1.9e-51 206.8 162 67.9
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 6.0e-50 201.8 154 68.2
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 3.0e-49 199.5 227 53.3
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 5.1e-49 198.7 177 60.5
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 6.6e-49 198.4 170 62.4
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 1.1e-48 197.6 170 61.2
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 6.2e-47 191.8 135 76.3
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 6.2e-47 191.8 147 68.7
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 1.0e-41 174.5 137 68.6
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 1.0e-41 174.5 199 50.3
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 1.3e-41 174.1 172 53.5
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 1.3e-39 167.5 136 64.0
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 4.8e-39 165.6 227 43.6
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 1.3e-36 157.5 144 61.1
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 5.4e-35 152.1 175 49.1
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 2.3e-33 146.7 104 74.0
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 2.3e-33 146.7 104 74.0
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 1.1e-32 144.4 104 73.1
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 1.4e-30 137.5 331 35.0
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 2.2e-28 130.2 160 43.8
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 2.3e-17 93.6 166 37.3
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 1.5e-16 90.9 57 82.5
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 6.1e-10 68.9 167 30.5
Solyc08g061800.3 Solanum lycopersicum HOM05D007323 ORTHO05D009238 1.1e-08 64.7 61 55.7
Eucgr.C00726 Eucalyptus grandis HOM05D007323 ORTHO05D009238 5.7e-08 62.4 60 60.0


User provided reference genes

Program Settings