Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G220500 Populus trichocarpa HOM05D007692 ORTHO05D009696 1.7e-61 239.2 125 100.0
Sabra06G0170400 Salix brachista HOM05D007692 ORTHO05D009696 2.2e-56 222.2 125 91.2
CiPaw.15G091700 Carya illinoinensis HOM05D007692 ORTHO05D009696 8.0e-35 150.6 110 70.9
MD15G1049600 Malus domestica HOM05D007692 ORTHO05D009696 3.0e-34 148.7 111 72.1
Manes.16G085800 Manihot esculenta HOM05D007692 ORTHO05D009696 3.0e-34 148.7 103 73.8
RcHm_v2.0_Chr6g0311901 Rosa chinensis HOM05D007692 ORTHO05D009696 4.0e-34 148.3 111 70.3
MD08G1071600 Malus domestica HOM05D007692 ORTHO05D009696 1.2e-33 146.7 111 70.3
Prupe.1G403900 Prunus persica HOM05D007692 ORTHO05D009696 1.2e-33 146.7 112 73.2
FvH4_2g30960 Fragaria vesca HOM05D007692 ORTHO05D009696 2.2e-32 142.5 111 68.5
Hma1.2p1_0278F.1_g111850 Hydrangea macrophylla HOM05D007692 ORTHO05D009696 1.4e-31 139.8 105 69.5
Nn2g12400 Nelumbo nucifera HOM05D007692 ORTHO05D009696 1.4e-31 139.8 102 68.6
QL02p017055 Quercus lobata HOM05D007692 ORTHO05D009696 4.1e-31 138.3 110 65.5
Thecc.09G063700 Theobroma cacao HOM05D007692 ORTHO05D009696 1.2e-30 136.7 105 67.6
Cpa.g.sc126.21 Carica papaya HOM05D007692 ORTHO05D009696 1.6e-30 136.3 110 65.5
QL02p017043 Quercus lobata HOM05D007692 ORTHO05D009696 1.6e-30 136.3 108 65.7
Duzib168G1711 Durio zibethinus HOM05D007692 ORTHO05D009696 2.7e-30 135.6 105 66.7
TAR624G0897 Trochodendron aralioides HOM05D007692 ORTHO05D009696 1.3e-29 133.3 100 67.0
Haze_18297 Corylus avellana HOM05D007692 ORTHO05D009696 2.3e-29 132.5 108 66.7
COL.COLO4_21142 Corchorus olitorius HOM05D007692 ORTHO05D009696 1.9e-28 129.4 106 63.2
CANSAT25G1329 Cannabis sativa HOM05D007692 ORTHO05D009696 4.3e-28 128.3 106 61.3
Cfa017868 Carpinus fangiana HOM05D007692 ORTHO05D009696 7.3e-28 127.5 108 64.8
PGR031G0311 Punica granatum HOM05D007692 ORTHO05D009696 9.5e-28 127.1 100 68.0
VMungo0647G2522 Vigna mungo HOM05D007692 ORTHO05D009696 1.6e-27 126.3 103 66.0
Medtr1g015470 Medicago truncatula HOM05D007692 ORTHO05D009696 1.0e-26 123.6 110 58.2
Lj5g0021751 Lotus japonicus HOM05D007692 ORTHO05D009696 1.4e-26 123.2 110 59.1
DCAR_001232 Daucus carota HOM05D006390 ORTHO05D007899 4.0e-26 121.7 100 62.0
Glyma.17G225900 Glycine max HOM05D007692 ORTHO05D009696 4.0e-26 121.7 110 58.2
Nitab4.5_0008422g0010 Nicotiana tabacum HOM05D007692 ORTHO05D009696 4.0e-26 121.7 101 59.4
arahy.Tifrunner.gnm1.ann1.0E4SK3 Arachis hypogaea HOM05D007692 ORTHO05D009696 5.2e-26 121.3 103 65.0
TPR.G38893 Trifolium pratense HOM05D007692 ORTHO05D009696 5.2e-26 121.3 110 56.4
MELO3C016914.2 Cucumis melo HOM05D007692 ORTHO05D009696 1.2e-25 120.2 107 58.9
CsaV3_4G036060 Cucumis sativus L. HOM05D007692 ORTHO05D009696 1.2e-25 120.2 107 58.9
Nn8g39911 Nelumbo nucifera HOM05D007692 ORTHO05D009696 1.2e-25 120.2 106 63.2
CAN.G567.82 Capsicum annuum HOM05D007692 ORTHO05D009696 1.5e-25 119.8 93 60.2
Solyc08g061640.1 Solanum lycopersicum HOM05D007692 ORTHO05D009696 2.0e-25 119.4 101 58.4
Sopen08g017100 Solanum pennellii HOM05D007692 ORTHO05D009696 2.0e-25 119.4 101 58.4
PGSC0003DMG400045083 Solanum tuberosum HOM05D007692 ORTHO05D009696 2.0e-25 119.4 101 58.4
Nitab4.5_0000446g0120 Nicotiana tabacum HOM05D007692 ORTHO05D009696 3.4e-25 118.6 101 58.4
Psat6g022960 Pisum sativum HOM05D007692 ORTHO05D009696 3.4e-25 118.6 103 58.3
Dinv22937 Davidia involucrata HOM05D007692 ORTHO05D009696 4.4e-25 118.2 102 63.7
Peaxi162Scf00486g00102 Petunia axillaris HOM05D007692 ORTHO05D009696 9.8e-25 117.1 98 60.2
Eucgr.C00729 Eucalyptus grandis HOM05D007692 ORTHO05D009696 1.3e-24 116.7 101 58.4
ClCG05G015760 Citrullus lanatus HOM05D007692 ORTHO05D009696 3.7e-24 115.2 107 57.9
Ciclev10010178m.g Citrus clementina HOM05D007692 ORTHO05D009696 3.7e-24 115.2 110 57.3
TWI63G1278 Tripterygium wilfordii HOM05D007692 ORTHO05D009696 3.7e-24 115.2 109 60.6
Gohir.D05G040100 Gossypium hirsutum HOM05D007692 ORTHO05D009696 4.9e-24 114.8 101 60.4
Gorai.009G040500 Gossypium raimondii HOM05D007692 ORTHO05D009696 4.9e-24 114.8 101 60.4
Sed0007061 Sechium edule HOM05D007692 ORTHO05D009696 1.4e-23 113.2 102 58.8
Gohir.A05G038600 Gossypium hirsutum HOM05D007692 ORTHO05D009696 2.4e-23 112.5 101 58.4
Lsat_1_v5_gn_7_58320 Lactuca sativa HOM05D006390 ORTHO05D007899 9.2e-23 110.5 104 55.8
MBI13_g42817_MAGBIO Magnolia biondii HOM05D007692 ORTHO05D009696 9.2e-23 110.5 100 55.0
CSS0041722 Camellia sinensis var. sinensis HOM05D007692 ORTHO05D009696 1.2e-22 110.2 90 63.3
THA.LOC104810956 Tarenaya hassleriana HOM05D007692 ORTHO05D009696 1.6e-22 109.8 101 52.5
PSO541G2080 Papaver somniferum HOM05D007692 ORTHO05D009696 2.0e-22 109.4 100 59.0
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.8e-22 107.5 99 56.6
TPR.G3568 Trifolium pratense HOM05D007692 ORTHO05D009696 7.8e-22 107.5 112 53.6
PSO675G1902 Papaver somniferum HOM05D007692 ORTHO05D009696 1.3e-21 106.7 100 59.0
SalBow4G0926 Salvia bowleyana HOM05D007692 ORTHO05D009696 1.3e-21 106.7 91 54.9
Aqoxy2G03896 Aquilegia oxysepala HOM05D007692 ORTHO05D009696 2.3e-21 105.9 103 55.3
Phvul.001G038600 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 2.3e-21 105.9 89 64.0
SGA_v2.0_scaffold20G09157 Striga asiatica HOM05D006390 ORTHO05D007899 2.3e-21 105.9 104 50.0
EL10Ac2g03778 Beta vulgaris HOM05D007692 ORTHO05D009696 3.0e-21 105.5 106 56.6
Oeu003971.1 Olea europaea HOM05D007692 ORTHO05D009696 3.0e-21 105.5 107 51.4
Zm00001eb005780 Zea mays HOM05D007692 ORTHO05D009696 6.6e-21 104.4 103 52.4
Glyma.06G056100 Glycine max HOM05D007692 ORTHO05D009696 2.5e-20 102.4 103 54.4
HPP92_004156 Vanilla planifolia HOM05D007692 ORTHO05D009696 3.3e-20 102.1 98 51.0
Sc06g0001120 Simmondsia chinensis HOM05D007692 ORTHO05D009696 4.3e-20 101.7 112 52.7
VMungo1309G1304 Vigna mungo HOM05D007692 ORTHO05D009696 1.6e-19 99.8 103 51.5
A10p18810 Brassica napus HOM05D007692 ORTHO05D009696 3.6e-19 98.6 102 51.0
C09p54830 Brassica napus HOM05D007692 ORTHO05D009696 3.6e-19 98.6 102 51.0
BolC9t58343H Brassica oleracea HOM05D007692 ORTHO05D009696 3.6e-19 98.6 102 51.0
BraA10t43961Z Brassica rapa HOM05D007692 ORTHO05D009696 3.6e-19 98.6 102 51.0
Thhalv10015977m.g Eutrema salsugineum HOM05D007692 ORTHO05D009696 3.6e-19 98.6 102 51.0
BcaB08g36470 Brassica carinata HOM05D007692 ORTHO05D009696 6.2e-19 97.8 102 51.0
HanXRQChr03g0065641 Helianthus annuus HOM05D007692 ORTHO05D009696 1.1e-18 97.1 102 49.0
Medtr3g105090 Medicago truncatula HOM05D007692 ORTHO05D009696 1.1e-18 97.1 109 50.5
Phvul.009G082200 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 1.1e-18 97.1 108 50.0
unitig_32.g11527 Utricularia gibba HOM05D007692 ORTHO05D009696 1.1e-18 97.1 106 49.1
Ah.11g044290 Amaranthus hybridus HOM05D007692 ORTHO05D009696 1.4e-18 96.7 109 47.7
CDE04G2134 Ceratophyllum demersum HOM05D007692 ORTHO05D009696 1.2e-17 93.6 107 46.7
CARHR191630 Cardamine hirsuta HOM05D007692 ORTHO05D009696 7.5e-17 90.9 97 50.5
Lalb_Chr11g0063341 Lupinus albus HOM05D007692 ORTHO05D009696 7.5e-17 90.9 103 48.5
Psat5g030520 Pisum sativum HOM05D007692 ORTHO05D009696 9.8e-17 90.5 93 52.7
Medtr1g015490 Medicago truncatula HOM05D007692 ORTHO05D009696 1.3e-16 90.1 101 51.5
Atru.chr7.1844 Acer truncatum HOM05D007692 ORTHO05D009696 2.9e-16 89.0 77 62.3
Duzib150G0238 Durio zibethinus HOM05D007692 ORTHO05D009696 1.1e-15 87.0 153 39.2
ATR0598G206 Amborella trichopoda HOM05D007692 ORTHO05D009696 1.4e-15 86.7 100 47.0
Carub.0006s1955 Capsella rubella HOM05D007692 ORTHO05D009696 7.0e-15 84.3 103 48.5
Os03g0176900 Oryza sativa ssp. japonica HOM05D007692 ORTHO05D009696 7.0e-15 84.3 103 46.6
Sp6g23280 Schrenkiella parvula HOM05D007692 ORTHO05D009696 9.2e-15 84.0 102 44.1
Lj1g0020593 Lotus japonicus HOM05D007692 ORTHO05D009696 2.7e-14 82.4 111 46.8
AT5G21910 Arabidopsis thaliana HOM05D007692 ORTHO05D009696 6.0e-14 81.3 102 47.1
Cc08_g01120 Coffea canephora HOM05D007692 ORTHO05D009696 1.7e-13 79.7 111 44.1
Psat6g004480 Pisum sativum HOM05D007692 ORTHO05D009696 8.6e-13 77.4 79 51.9
TAR624G1426 Trochodendron aralioides HOM05D000001 ORTHO05D000003 1.9e-12 76.3 65 63.1
Carub.0005s0963 Capsella rubella HOM05D007692 ORTHO05D009696 5.6e-12 74.7 100 41.0
Lalb_Chr14g0366461 Lupinus albus HOM05D007692 ORTHO05D009696 5.6e-12 74.7 77 54.5
BcaB01g04756 Brassica carinata HOM05D007692 ORTHO05D009696 1.4e-07 60.1 41 61.0
Sed0007062 Sechium edule HOM05D007692 ORTHO05D009696 1.6e-06 56.6 49 55.1


User provided reference genes

Program Settings